iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-136398

Ensembl Protein ID

AT4G22960.1

UniProt Accession

F4JMQ2; F4JMQ2_ARATH

Genbank Protein ID

CP002687

Protein Name

FAM63A-like protein (DUF544)

Genbank Nucleotide ID

AEE84685.1

Gene Name

At4g22960;F7H19.140;F7H19_140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G22960	AT4G22960.1	AT4G22960.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/MIU	38.28	3.00e-16	81.30	IUUC-Sce-136670
DUB/MINDY	38.28	3.00e-16	81.30	IUUC-Sce-136670

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAIDNSRPPP DEIFYKTKKI LYRGQRCNII LQDKNGPCPL IAICNVLILK HGINLDTYNS 60
QVSEEDLVNL VIDVLDDTDE YIDIGLIRKL ACGINVDLKF ERITDFELTP ELDIFRSLKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACACACTTC TTGAGAAATT TCAGCAAAGT GTGTCTTCTC CGATTTCGCA GACGGTTAGA 60
TCTCAACAAG CGATTCTCAT CGTCGTGAAC CTTCTTCTTT AATGGCGATC GATAACTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007518--MINDY
IPR033979--MINDY_domain

Pfam

PF04424--MINDY_DUB

Gene Ontology

GO:1990380--F:Lys48-specific deubiquitinase activity
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity

KEGG

ath:AT4G22960

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-136395	Arabidopsis lyrata	63.40	2.00e-153	534.00
IUUC-Ago-136399	Ashbya gossypii	35.25	1.00e-15	76.60
IUUC-Ani-136403	Aspergillus nidulans	40.51	7.00e-12	65.50
IUUC-Ang-136404	Aspergillus niger	39.77	1.00e-11	65.10
IUUC-Bgr-136410	Blumeria graminis	39.33	3.00e-11	63.50
IUUC-Cel-136423	Caenorhabditis elegans	42.70	1.00e-19	90.10
IUUC-Dme-031612	Drosophila melanogaster	35.71	4.00e-01	28.90
IUUC-Ggr-136490	Gaeumannomyces graminis	37.39	1.00e-14	75.10
IUUC-Lma-136525	Leptosphaeria maculans	36.63	8.00e-13	68.60
IUUC-Mor-136537	Magnaporthe oryzae	41.58	2.00e-15	77.40
IUUC-Mpo-136538	Magnaporthe poae	40.00	8.00e-14	72.00
IUUC-Mvi-136546	Microbotryum violaceum	33.85	7.00e-18	85.10
IUUC-Nfi-136569	Neosartorya fischeri	34.35	1.00e-12	67.80
IUUC-Pgr-136662	Puccinia graminis	27.40	3.00e-08	52.80
IUUC-Sce-136670	Saccharomyces cerevisiae	37.50	4.00e-17	81.60
IUUC-Spo-136676	Schizosaccharomyces pombe	37.70	4.00e-04	38.50
IUUC-Sre-136690	Sporisorium reilianum	34.69	7.00e-18	85.50
IUUC-Uma-136726	Ustilago maydis	34.25	4.00e-18	86.30
IUUC-Yli-136742	Yarrowia lipolytica	28.95	3.00e-13	69.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence