iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028098

Ensembl Protein ID

ENSDARP00000075216.4

UniProt Accession

F1REB9; F1REB9_DANRE

Genbank Protein ID

ENSDARP00000075216

Protein Name

TATA element modulatory factor 1

Genbank Nucleotide ID

AL954814

Gene Name

tmf1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000057997.5	ENSDART00000080770.5	ENSDARP00000075216.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	59.30	0.00e+00	978.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MSWFNASHLS SFAKQALTTA QKSIDRVLDI KEEEWGDTTG QNFPDPPGKP APTGWGMNQW 60
NSPTEEQTTS PPPSSEAITT PVTRTVVDES EDFFSAFLPP GDVQAVSNTK VVSVAPAKSN 120

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Nucleotide Sequence
(Fasta)

GATGCGCTGC TACGTGGACG GGAAGTAGAT CTCGAGCTGC CAGAGGAAAA CAAAACAATG 60
CGTACAAGTC CAACCTAAGA GTCGAGGATT GCGAAAGTGA AGGAAAAATG TCGCCTATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR012284--6PGD_dom_3
IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

KEGG

dre:445128

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	29.61	8.00e-19	89.70
IUUC-Aml-001448	Ailuropoda melanoleuca	59.51	0.00e+00	967.00
IUUC-Atr-003092	Amborella trichopoda	30.32	7.00e-33	136.00
IUUC-Apl-003546	Anas platyrhynchos	66.04	0.00e+00	868.00
IUUC-Aca-004234	Anolis carolinensis	58.37	0.00e+00	982.00
IUUC-Ath-007364	Arabidopsis thaliana	28.09	2.00e-37	150.00
IUUC-Acl-008271	Aspergillus clavatus	27.82	6.00e-10	60.10
IUUC-Afl-008405	Aspergillus flavus	29.00	9.00e-07	49.30
IUUC-Afu-009059	Aspergillus fumigatus	27.52	5.00e-11	63.50
IUUC-Ani-009416	Aspergillus nidulans	28.46	1.00e-09	58.50
IUUC-Ang-009857	Aspergillus niger	26.71	4.00e-10	60.50
IUUC-Aor-009910	Aspergillus oryzae	29.00	9.00e-07	49.30
IUUC-Ate-010427	Aspergillus terreus	29.60	1.00e-06	48.90
IUUC-Ame-011270	Astyanax mexicanus	74.29	0.00e+00	1403.00
IUUC-Bgr-012100	Blumeria graminis	29.27	5.00e-08	53.50
IUUC-Bta-012337	Bos taurus	58.99	0.00e+00	944.00
IUUC-Bci-013775	Botrytis cinerea	31.73	2.00e-06	48.10
IUUC-Bdi-014582	Brachypodium distachyon	37.62	3.00e-09	57.80
IUUC-Cja-019803	Callithrix jacchus	58.78	0.00e+00	959.00
IUUC-Cfa-020451	Canis familiaris	58.81	0.00e+00	927.00
IUUC-Cpo-021327	Cavia porcellus	65.54	0.00e+00	831.00
IUUC-Cre-022628	Chlamydomonas reinhardtii	27.59	5.00e-03	36.60
IUUC-Csa-023803	Chlorocebus sabaeus	58.91	0.00e+00	964.00
IUUC-Cho-024293	Choloepus hoffmanni	62.41	2.00e-111	397.00
IUUC-Cin-025461	Ciona intestinalis	39.81	5.00e-39	154.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	27.54	8.00e-09	56.20
IUUC-Cme-027311	Cyanidioschyzon merolae	32.77	1.00e-03	38.90
IUUC-Dno-029535	Dasypus novemcinctus	58.80	0.00e+00	941.00
IUUC-Dor-031120	Dipodomys ordii	58.86	0.00e+00	999.00
IUUC-Dse-031548	Dothistroma septosporum	27.69	8.00e-05	42.40
IUUC-Dme-031658	Drosophila melanogaster	32.21	6.00e-26	113.00
IUUC-Ete-032764	Echinops telfairi	53.48	2.00e-175	610.00
IUUC-Eca-034312	Equus caballus	59.13	0.00e+00	942.00
IUUC-Eeu-034967	Erinaceus europaeus	60.89	4.00e-155	541.00
IUUC-Fca-036312	Felis catus	58.85	0.00e+00	954.00
IUUC-Fal-036979	Ficedula albicollis	59.42	0.00e+00	877.00
IUUC-Fox-037833	Fusarium oxysporum	32.26	7.00e-06	46.20
IUUC-Gmo-039175	Gadus morhua	75.96	0.00e+00	841.00
IUUC-Ggr-039752	Gaeumannomyces graminis	29.17	3.00e-09	57.80
IUUC-Gga-041252	Gallus gallus	58.18	0.00e+00	956.00
IUUC-Gac-042186	Gasterosteus aculeatus	79.51	0.00e+00	820.00
IUUC-Gma-042878	Glycine max	28.89	7.00e-19	90.10
IUUC-Ggo-045127	Gorilla gorilla	58.76	0.00e+00	952.00
IUUC-Hsa-046889	Homo sapiens	59.13	0.00e+00	960.00
IUUC-Hvu-047231	Hordeum vulgare	34.10	7.00e-25	109.00
IUUC-Itr-048895	Ictidomys tridecemlineatus	58.38	0.00e+00	833.00
IUUC-Lch-049701	Latimeria chalumnae	61.86	0.00e+00	1052.00
IUUC-Lpe-051071	Leersia perrieri	39.62	3.00e-14	74.30
IUUC-Loc-052900	Lepisosteus oculatus	67.94	0.00e+00	1173.00
IUUC-Lma-053189	Leptosphaeria maculans	28.08	3.00e-09	57.80
IUUC-Laf-054583	Loxodonta africana	58.82	0.00e+00	932.00
IUUC-Meu-056215	Macropus eugenii	59.71	2.00e-95	344.00
IUUC-Mor-057227	Magnaporthe oryzae	24.18	3.00e-04	41.20
IUUC-Mpo-057315	Magnaporthe poae	38.33	3.00e-06	47.80
IUUC-Mtr-058276	Medicago truncatula	30.19	3.00e-16	80.90
IUUC-Mga-059916	Meleagris gallopavo	59.12	0.00e+00	900.00
IUUC-Mmr-061789	Microcebus murinus	64.37	0.00e+00	747.00
IUUC-Mdo-062174	Monodelphis domestica	59.49	0.00e+00	976.00
IUUC-Mmu-063422	Mus musculus	64.09	0.00e+00	827.00
IUUC-Mac-065498	Musa acuminata	30.03	6.00e-22	100.00
IUUC-Mpu-065744	Mustela putorius furo	59.36	0.00e+00	962.00
IUUC-Mlu-066925	Myotis lucifugus	59.14	0.00e+00	899.00
IUUC-Nfi-068254	Neosartorya fischeri	27.52	3.00e-11	64.30
IUUC-Ncr-068887	Neurospora crassa	25.36	6.00e-10	60.10
IUUC-Nle-070100	Nomascus leucogenys	58.90	0.00e+00	958.00
IUUC-Opr-071131	Ochotona princeps	57.09	0.00e+00	718.00
IUUC-Ont-071378	Oreochromis niloticus	78.56	0.00e+00	1113.00
IUUC-Oan-073705	Ornithorhynchus anatinus	58.79	0.00e+00	987.00
IUUC-Ocu-074158	Oryctolagus cuniculus	58.49	0.00e+00	1005.00
IUUC-Oba-075498	Oryza barthii	39.62	1.00e-14	75.90
IUUC-Obr-076136	Oryza brachyantha	31.04	2.00e-25	111.00
IUUC-Ogl-077020	Oryza glaberrima	32.90	4.00e-25	110.00
IUUC-Ogu-078875	Oryza glumaepatula	39.62	2.00e-17	84.70
IUUC-Oin-079223	Oryza indica	32.90	5.00e-25	110.00
IUUC-Olo-080859	Oryza longistaminata	30.75	5.00e-18	87.00
IUUC-Ome-081621	Oryza meridionalis	30.39	5.00e-17	84.00
IUUC-Oni-082628	Oryza nivara	39.62	2.00e-14	75.10
IUUC-Opu-083825	Oryza punctata	39.62	4.00e-17	84.00
IUUC-Oru-084959	Oryza rufipogon	39.62	2.00e-14	75.10
IUUC-Osa-086104	Oryza sativa	32.90	4.00e-25	110.00
IUUC-Ola-087148	Oryzias latipes	72.78	0.00e+00	1077.00
IUUC-Olu-087856	Ostreococcus lucimarinus	29.67	2.00e-12	68.20
IUUC-Oga-088598	Otolemur garnettii	58.42	0.00e+00	933.00
IUUC-Oar-090450	Ovis aries	59.02	0.00e+00	938.00
IUUC-Ptr-091659	Pan troglodytes	59.16	0.00e+00	954.00
IUUC-Pan-091964	Papio anubis	64.04	0.00e+00	810.00
IUUC-Psi-093585	Pelodiscus sinensis	65.66	0.00e+00	733.00
IUUC-Pma-094379	Petromyzon marinus	48.66	0.00e+00	749.00
IUUC-Pno-095032	Phaeosphaeria nodorum	25.15	1.00e-08	55.50
IUUC-Ppa-095425	Physcomitrella patens	32.21	2.00e-27	118.00
IUUC-Pfo-096386	Poecilia formosa	69.44	0.00e+00	1290.00
IUUC-Pab-098042	Pongo abelii	67.79	1.00e-130	461.00
IUUC-Pop-099005	Populus trichocarpa	39.44	1.00e-14	74.70
IUUC-Pca-100308	Procavia capensis	62.53	0.00e+00	739.00
IUUC-Ppe-101449	Prunus persica	28.48	2.00e-30	128.00
IUUC-Pva-103119	Pteropus vampyrus	56.12	0.00e+00	646.00
IUUC-Pte-104335	Pyrenophora teres	31.01	2.00e-09	58.50
IUUC-Pyt-104547	Pyrenophora triticirepentis	32.06	5.00e-10	60.10
IUUC-Rno-105578	Rattus norvegicus	58.73	0.00e+00	915.00
IUUC-Sha-106612	Sarcophilus harrisii	59.62	0.00e+00	938.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	25.19	3.40e-02	33.10
IUUC-Ssl-108390	Sclerotinia sclerotiorum	23.15	9.00e-11	62.80
IUUC-Smo-108781	Selaginella moellendorffii	29.30	3.00e-15	75.90
IUUC-Sit-109754	Setaria italica	36.63	6.00e-09	57.00
IUUC-Sly-111573	Solanum lycopersicum	33.25	1.00e-25	112.00
IUUC-Sar-113118	Sorex araneus	56.23	0.00e+00	889.00
IUUC-Sbi-114519	Sorghum bicolor	30.54	6.00e-25	110.00
IUUC-Ssc-115826	Sus scrofa	56.45	0.00e+00	873.00
IUUC-Tgu-116702	Taeniopygia guttata	60.10	0.00e+00	909.00
IUUC-Tru-117915	Takifugu rubripes	73.71	0.00e+00	1045.00
IUUC-Tsy-119224	Tarsius syrichta	59.77	0.00e+00	965.00
IUUC-Tni-120157	Tetraodon nigroviridis	67.01	0.00e+00	1165.00
IUUC-Tca-121361	Theobroma cacao	40.14	4.00e-16	80.10
IUUC-Tre-122066	Trichoderma reesei	27.50	3.00e-08	54.30
IUUC-Tvi-122562	Trichoderma virens	30.21	7.00e-08	53.10
IUUC-Tae-123602	Triticum aestivum	31.89	1.00e-21	99.00
IUUC-Tme-126895	Tuber melanosporum	28.12	7.00e-08	52.80
IUUC-Tbe-128074	Tupaia belangeri	52.78	0.00e+00	672.00
IUUC-Ttr-128190	Tursiops truncatus	58.43	0.00e+00	952.00
IUUC-Vda-129710	Verticillium dahliae	28.93	4.00e-10	60.50
IUUC-Vpa-130072	Vicugna pacos	59.40	0.00e+00	875.00
IUUC-Vvi-130853	Vitis vinifera	41.91	2.00e-09	58.20
IUUC-Xtr-131969	Xenopus tropicalis	65.33	0.00e+00	881.00
IUUC-Xma-133623	Xiphophorus maculatus	77.98	0.00e+00	1176.00
IUUC-Yli-134550	Yarrowia lipolytica	26.29	2.00e-11	64.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence