iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028055

Ensembl Protein ID

ENSDARP00000108576.2

UniProt Accession

Q90X41; Q90X41_DANRE

Genbank Protein ID

AAH56521.1; AAH66392.1; AAI71506.1; AAI71508.1; CAD10078.1

Protein Name

Novel protein similar to human splicing factor 3a, subunit 1, 120kD (SF3A1); Sf3a1 protein; Splicing factor 3a, subunit 1

Genbank Nucleotide ID

AL929263; BC066392; BC171506; BC171508; AL591213

Gene Name

sf3a1; dZ150F13.2-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000041887.5	ENSDART00000126687.3	ENSDARP00000108576.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.00e-16	60.0	694	777

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlk..v.....npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           v+v+v++++++ e++l+  v     + +d+V+++K ki++++g+p+ +q+L+y+G+ ++d ++La+y++ +g +ihl +k++gg
   Q: 694  VKVQVPNMQDKtEWKLSgqVlnfnlPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGAVIHLALKERGG 777
           57888888888888888873444549999**************************************************99875 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPPGPVQIMQ PELNNKPEEP KEETPATKPI VGIIYPPPEV RNIVDKTASF VARNGPEFEA 60
RIRQNEINNP KFNFLNPSDP YHAYYRHKVN EFKEGKAQEP SAAVPKVMQH PQQLPQKVQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGAGAGG GTAGACGGAG ATAGTGGAGG TAATGCTAGT AATGAATGGA GCGTTGTAGA 60
AAATCGTAAA AGAAAGAAAA GTTGGGCACA AATATCTGAA TCGGACAGCG AAAAGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

KEGG

dre:796388

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	33.95	1.00e-40	161.00
IUUC-Aml-002416	Ailuropoda melanoleuca	81.25	0.00e+00	795.00
IUUC-Atr-003001	Amborella trichopoda	49.64	1.00e-61	231.00
IUUC-Apl-003584	Anas platyrhynchos	81.53	0.00e+00	689.00
IUUC-Aca-004690	Anolis carolinensis	77.03	0.00e+00	771.00
IUUC-Aly-005487	Arabidopsis lyrata	44.86	9.00e-54	205.00
IUUC-Ath-007275	Arabidopsis thaliana	43.29	1.00e-54	207.00
IUUC-Acl-008320	Aspergillus clavatus	43.06	6.00e-47	182.00
IUUC-Afl-008707	Aspergillus flavus	46.08	1.00e-55	211.00
IUUC-Afu-008786	Aspergillus fumigatus	41.98	9.00e-47	181.00
IUUC-Ani-009307	Aspergillus nidulans	43.62	6.00e-52	198.00
IUUC-Ang-009761	Aspergillus niger	46.26	1.00e-54	207.00
IUUC-Aor-010067	Aspergillus oryzae	46.08	1.00e-55	211.00
IUUC-Ate-010515	Aspergillus terreus	45.73	6.00e-57	215.00
IUUC-Ame-011842	Astyanax mexicanus	89.03	0.00e+00	1051.00
IUUC-Bgr-012204	Blumeria graminis	44.44	5.00e-51	195.00
IUUC-Bta-013525	Bos taurus	81.25	0.00e+00	796.00
IUUC-Bci-013842	Botrytis cinerea	46.35	2.00e-48	187.00
IUUC-Bdi-014436	Brachypodium distachyon	37.13	1.00e-72	268.00
IUUC-Bol-015903	Brassica oleracea	42.67	1.00e-50	194.00
IUUC-Bra-017856	Brassica rapa	40.62	1.00e-18	88.60
IUUC-Cel-018261	Caenorhabditis elegans	50.85	1.00e-79	290.00
IUUC-Cja-018989	Callithrix jacchus	81.98	0.00e+00	790.00
IUUC-Cfa-020629	Canis familiaris	81.25	0.00e+00	794.00
IUUC-Cpo-021759	Cavia porcellus	81.25	0.00e+00	782.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	65.08	5.00e-21	95.50
IUUC-Csa-023750	Chlorocebus sabaeus	82.15	0.00e+00	790.00
IUUC-Cho-024581	Choloepus hoffmanni	83.27	1.00e-105	377.00
IUUC-Cin-025640	Ciona intestinalis	56.60	5.00e-144	504.00
IUUC-Csv-025855	Ciona savignyi	66.43	2.00e-99	357.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	43.57	1.00e-45	177.00
IUUC-Cne-026952	Cryptococcus neoformans	44.00	2.00e-49	190.00
IUUC-Dno-029259	Dasypus novemcinctus	83.14	0.00e+00	813.00
IUUC-Dor-031081	Dipodomys ordii	80.43	0.00e+00	783.00
IUUC-Dse-031438	Dothistroma septosporum	40.52	3.00e-47	183.00
IUUC-Dme-031975	Drosophila melanogaster	71.00	6.00e-88	318.00
IUUC-Ete-033177	Echinops telfairi	82.85	0.00e+00	775.00
IUUC-Eca-033670	Equus caballus	81.08	0.00e+00	796.00
IUUC-Eeu-035100	Erinaceus europaeus	78.25	0.00e+00	638.00
IUUC-Fca-036176	Felis catus	81.25	0.00e+00	795.00
IUUC-Fal-036776	Ficedula albicollis	87.94	0.00e+00	679.00
IUUC-Fox-037706	Fusarium oxysporum	42.55	8.00e-51	194.00
IUUC-Fso-038313	Fusarium solani	43.54	2.00e-46	180.00
IUUC-Gmo-038887	Gadus morhua	83.42	0.00e+00	1041.00
IUUC-Ggr-039932	Gaeumannomyces graminis	38.13	5.00e-34	139.00
IUUC-Gga-041184	Gallus gallus	81.77	0.00e+00	694.00
IUUC-Gac-042118	Gasterosteus aculeatus	85.81	0.00e+00	847.00
IUUC-Gma-042726	Glycine max	46.54	9.00e-61	228.00
IUUC-Ggo-045641	Gorilla gorilla	79.61	0.00e+00	967.00
IUUC-Hsa-045751	Homo sapiens	82.15	0.00e+00	790.00
IUUC-Hvu-047702	Hordeum vulgare	30.70	1.00e-22	101.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	81.25	0.00e+00	795.00
IUUC-Kpa-049400	Komagataella pastoris	30.91	7.00e-29	121.00
IUUC-Lch-050152	Latimeria chalumnae	85.95	3.00e-128	452.00
IUUC-Lpe-051570	Leersia perrieri	46.39	8.00e-30	125.00
IUUC-Loc-051753	Lepisosteus oculatus	85.91	0.00e+00	1058.00
IUUC-Lma-053219	Leptosphaeria maculans	37.05	3.00e-35	143.00
IUUC-Laf-053643	Loxodonta africana	83.25	0.00e+00	776.00
IUUC-Mcc-055091	Macaca mulatta	81.98	0.00e+00	790.00
IUUC-Meu-056036	Macropus eugenii	81.16	4.00e-117	415.00
IUUC-Mor-057214	Magnaporthe oryzae	37.45	6.00e-34	139.00
IUUC-Mpo-057385	Magnaporthe poae	32.47	2.00e-13	69.70
IUUC-Mtr-057954	Medicago truncatula	47.10	3.00e-58	220.00
IUUC-Mla-059020	Melampsora laricipopulina	37.78	1.00e-48	188.00
IUUC-Mga-060176	Meleagris gallopavo	81.66	0.00e+00	696.00
IUUC-Mvi-060278	Microbotryum violaceum	38.54	2.00e-51	197.00
IUUC-Mmr-061602	Microcebus murinus	81.16	0.00e+00	788.00
IUUC-Mdo-062047	Monodelphis domestica	82.64	0.00e+00	773.00
IUUC-Mmu-063377	Mus musculus	81.09	0.00e+00	784.00
IUUC-Mac-065644	Musa acuminata	45.21	9.00e-58	218.00
IUUC-Mpu-066047	Mustela putorius furo	81.41	0.00e+00	795.00
IUUC-Mlu-067039	Myotis lucifugus	81.25	0.00e+00	767.00
IUUC-Nfi-068434	Neosartorya fischeri	43.94	4.00e-53	202.00
IUUC-Ncr-068912	Neurospora crassa	40.15	2.00e-38	154.00
IUUC-Nle-069540	Nomascus leucogenys	82.15	0.00e+00	790.00
IUUC-Opr-071157	Ochotona princeps	79.93	0.00e+00	774.00
IUUC-Ont-072229	Oreochromis niloticus	84.00	0.00e+00	1008.00
IUUC-Oan-073616	Ornithorhynchus anatinus	81.42	3.00e-27	114.00
IUUC-Ocu-074002	Oryctolagus cuniculus	81.25	0.00e+00	797.00
IUUC-Oba-075659	Oryza barthii	34.52	5.00e-32	132.00
IUUC-Obr-076465	Oryza brachyantha	37.24	8.00e-50	192.00
IUUC-Ogl-077461	Oryza glaberrima	36.92	3.00e-71	263.00
IUUC-Ogu-078515	Oryza glumaepatula	37.16	4.00e-71	263.00
IUUC-Oin-080201	Oryza indica	41.22	2.00e-51	197.00
IUUC-Olo-080751	Oryza longistaminata	34.52	5.00e-32	132.00
IUUC-Ome-081201	Oryza meridionalis	37.28	3.00e-71	263.00
IUUC-Oni-082951	Oryza nivara	41.22	4.00e-51	196.00
IUUC-Opu-083560	Oryza punctata	37.28	3.00e-47	183.00
IUUC-Oru-084440	Oryza rufipogon	36.82	3.00e-71	263.00
IUUC-Osa-085699	Oryza sativa	36.92	3.00e-71	263.00
IUUC-Ola-086705	Oryzias latipes	80.45	0.00e+00	979.00
IUUC-Olu-087794	Ostreococcus lucimarinus	46.94	1.00e-48	187.00
IUUC-Oga-088896	Otolemur garnettii	82.31	0.00e+00	790.00
IUUC-Oar-090155	Ovis aries	80.26	0.00e+00	766.00
IUUC-Ptr-090754	Pan troglodytes	82.15	0.00e+00	792.00
IUUC-Pan-092464	Papio anubis	82.15	0.00e+00	790.00
IUUC-Psi-093166	Pelodiscus sinensis	87.55	0.00e+00	705.00
IUUC-Pma-094280	Petromyzon marinus	79.21	2.00e-125	443.00
IUUC-Pno-095106	Phaeosphaeria nodorum	37.31	4.00e-30	126.00
IUUC-Ppa-095459	Physcomitrella patens	48.54	3.00e-59	223.00
IUUC-Pfo-096212	Poecilia formosa	75.00	0.00e+00	644.00
IUUC-Pab-098482	Pongo abelii	82.15	0.00e+00	790.00
IUUC-Pop-099479	Populus trichocarpa	45.77	3.00e-52	200.00
IUUC-Pca-100776	Procavia capensis	84.00	1.00e-64	241.00
IUUC-Ppe-101595	Prunus persica	40.62	1.00e-19	92.00
IUUC-Pva-102981	Pteropus vampyrus	80.14	0.00e+00	738.00
IUUC-Pgr-103503	Puccinia graminis	37.81	7.00e-51	196.00
IUUC-Ptt-103994	Puccinia triticina	38.87	5.00e-46	179.00
IUUC-Pte-104226	Pyrenophora teres	35.32	4.00e-36	145.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	36.40	5.00e-39	155.00
IUUC-Rno-105225	Rattus norvegicus	78.37	0.00e+00	786.00
IUUC-Sce-106278	Saccharomyces cerevisiae	23.04	4.00e-12	65.10
IUUC-Sha-107353	Sarcophilus harrisii	79.87	0.00e+00	723.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	42.59	8.00e-52	197.00
IUUC-Spo-108266	Schizosaccharomyces pombe	42.36	5.00e-52	198.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	47.45	2.00e-54	206.00
IUUC-Smo-109675	Selaginella moellendorffii	45.00	9.00e-51	195.00
IUUC-Sit-110019	Setaria italica	46.54	5.00e-30	126.00
IUUC-Sly-111621	Solanum lycopersicum	46.91	1.00e-58	221.00
IUUC-Stu-112703	Solanum tuberosum	46.95	3.00e-59	223.00
IUUC-Sar-113166	Sorex araneus	77.47	0.00e+00	701.00
IUUC-Sbi-114746	Sorghum bicolor	46.39	3.00e-30	127.00
IUUC-Sre-115196	Sporisorium reilianum	40.27	1.00e-49	191.00
IUUC-Ssc-115573	Sus scrofa	81.25	0.00e+00	796.00
IUUC-Tgu-117284	Taeniopygia guttata	88.58	0.00e+00	691.00
IUUC-Tru-118236	Takifugu rubripes	83.17	0.00e+00	760.00
IUUC-Tsy-119219	Tarsius syrichta	77.63	0.00e+00	756.00
IUUC-Tni-119929	Tetraodon nigroviridis	82.58	3.00e-98	352.00
IUUC-Tca-121156	Theobroma cacao	45.64	4.00e-55	209.00
IUUC-Tre-122179	Trichoderma reesei	42.44	1.00e-42	167.00
IUUC-Tvi-122326	Trichoderma virens	42.07	2.00e-47	183.00
IUUC-Tae-124733	Triticum aestivum	37.25	2.00e-70	261.00
IUUC-Tur-126352	Triticum urartu	33.50	6.00e-41	162.00
IUUC-Tme-126996	Tuber melanosporum	43.23	1.00e-50	194.00
IUUC-Tbe-127271	Tupaia belangeri	78.62	0.00e+00	748.00
IUUC-Ttr-128433	Tursiops truncatus	80.62	0.00e+00	793.00
IUUC-Uma-129357	Ustilago maydis	38.64	7.00e-43	169.00
IUUC-Vda-130010	Verticillium dahliae	42.34	4.00e-43	169.00
IUUC-Vvi-131734	Vitis vinifera	43.36	2.00e-17	85.10
IUUC-Xtr-132013	Xenopus tropicalis	77.57	0.00e+00	943.00
IUUC-Xma-134244	Xiphophorus maculatus	85.30	0.00e+00	800.00
IUUC-Yli-134579	Yarrowia lipolytica	36.22	4.00e-32	132.00
IUUC-Zma-135716	Zea mays	46.39	1.00e-30	128.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence