iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cfa-021188

Ensembl Protein ID

ENSCAFP00000014734.3

UniProt Accession

E2RH17; E2RH17_CANLF

Genbank Protein ID

ENSCAFP00000014734

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03015485

Gene Name

LDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000010005.3	ENSCAFT00000015927.3	ENSCAFP00000014734.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	57.46	5.00e-127	451.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Canis familiaris

Protein Sequence
(Fasta)

PDRPLAAARG RQHRAEAGAG RRRGQGPRAA AAAHARPVPV RGGHRDSAGP PAAGDVKMSV 60
GCACPGCSSK SFKLYSPKEP PNGNAFPPFH PGTMLDRDVG PTPMYPPTYL EPGIGRHTPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGACAGGC CCCTCGCTGC AGCCAGGGGC CGCCAGCACC GGGCCGAGGC CGGGGCGGGC 60
CGGCGGCGAG GGCAGCGGGG CCGCGGGCGG CGGCGGCGGC TCATGCCCGG CCTGTCCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0000790--C:nuclear chromatin
GO:0005667--C:transcription factor complex
GO:0003682--F:chromatin binding
GO:0001158--F:enhancer sequence-specific DNA binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0009948--P:anterior/posterior axis specification
GO:0022607--P:cellular component assembly
GO:0021702--P:cerebellar Purkinje cell differentiation
GO:0010669--P:epithelial structure maintenance
GO:0001702--P:gastrulation with mouth forming second
GO:0001942--P:hair follicle development
GO:0043973--P:histone H3-K4 acetylation
GO:0045647--P:negative regulation of erythrocyte differentiation
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0045785--P:positive regulation of cell adhesion
GO:0046985--P:positive regulation of hemoglobin biosynthetic process
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0032784--P:regulation of DNA-templated transcription, elongation
GO:0051893--P:regulation of focal adhesion assembly
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance
GO:0006366--P:transcription from RNA polymerase II promoter
GO:0000972--P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016055--P:Wnt signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.90	2.00e-04	41.60
IUUC-Aml-002031	Ailuropoda melanoleuca	96.15	0.00e+00	794.00
IUUC-Atr-003083	Amborella trichopoda	23.53	2.00e-04	41.60
IUUC-Apl-004210	Anas platyrhynchos	97.55	4.00e-178	617.00
IUUC-Aca-005241	Anolis carolinensis	98.06	0.00e+00	756.00
IUUC-Aly-006204	Arabidopsis lyrata	23.94	2.00e-06	48.10
IUUC-Ath-007339	Arabidopsis thaliana	23.94	2.00e-06	48.50
IUUC-Acl-008255	Aspergillus clavatus	20.60	8.00e-07	49.30
IUUC-Ame-010910	Astyanax mexicanus	93.24	0.00e+00	721.00
IUUC-Bgr-012180	Blumeria graminis	20.94	1.00e-05	45.10
IUUC-Bta-012596	Bos taurus	73.11	6.00e-154	536.00
IUUC-Bci-013927	Botrytis cinerea	26.03	1.00e-06	48.90
IUUC-Bol-015721	Brassica oleracea	24.48	4.00e-07	50.40
IUUC-Bra-017183	Brassica rapa	24.48	4.00e-07	50.40
IUUC-Cel-018189	Caenorhabditis elegans	33.19	2.00e-29	123.00
IUUC-Cja-019586	Callithrix jacchus	74.37	3.00e-155	541.00
IUUC-Cpo-022350	Cavia porcellus	98.52	0.00e+00	737.00
IUUC-Csa-023816	Chlorocebus sabaeus	98.79	0.00e+00	761.00
IUUC-Cho-024958	Choloepus hoffmanni	60.21	3.00e-63	235.00
IUUC-Cin-025721	Ciona intestinalis	50.80	1.00e-87	316.00
IUUC-Csv-026065	Ciona savignyi	51.44	6.00e-92	330.00
IUUC-Dre-027356	Danio rerio	70.97	6.00e-151	527.00
IUUC-Dno-029918	Dasypus novemcinctus	99.50	0.00e+00	778.00
IUUC-Dor-030634	Dipodomys ordii	98.94	0.00e+00	687.00
IUUC-Dse-031245	Dothistroma septosporum	24.67	5.00e-05	43.50
IUUC-Dme-031667	Drosophila melanogaster	62.79	3.00e-124	439.00
IUUC-Ete-032246	Echinops telfairi	72.70	3.00e-151	527.00
IUUC-Eca-034015	Equus caballus	73.82	2.00e-155	541.00
IUUC-Eeu-034902	Erinaceus europaeus	98.94	0.00e+00	687.00
IUUC-Fca-035903	Felis catus	99.51	0.00e+00	755.00
IUUC-Fal-037407	Ficedula albicollis	73.67	3.00e-152	531.00
IUUC-Gmo-039466	Gadus morhua	90.57	0.00e+00	732.00
IUUC-Ggr-040030	Gaeumannomyces graminis	25.93	3.00e-03	37.70
IUUC-Gga-040214	Gallus gallus	98.54	0.00e+00	761.00
IUUC-Gac-042214	Gasterosteus aculeatus	89.95	0.00e+00	734.00
IUUC-Gma-042794	Glycine max	23.90	3.00e-06	47.80
IUUC-Ggo-044988	Gorilla gorilla	73.54	6.00e-156	543.00
IUUC-Hsa-046092	Homo sapiens	74.23	9.00e-157	546.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	99.03	0.00e+00	763.00
IUUC-Lch-049895	Latimeria chalumnae	80.40	4.00e-96	343.00
IUUC-Lpe-050806	Leersia perrieri	25.34	3.00e-06	47.40
IUUC-Loc-052845	Lepisosteus oculatus	95.40	0.00e+00	751.00
IUUC-Lma-053090	Leptosphaeria maculans	24.41	1.00e-04	42.40
IUUC-Laf-054538	Loxodonta africana	96.73	0.00e+00	647.00
IUUC-Mcc-055116	Macaca mulatta	79.31	1.00e-116	412.00
IUUC-Meu-056777	Macropus eugenii	93.37	0.00e+00	631.00
IUUC-Mpo-057376	Magnaporthe poae	21.47	1.00e-03	38.90
IUUC-Mtr-058142	Medicago truncatula	25.83	3.00e-06	47.80
IUUC-Mga-059716	Meleagris gallopavo	73.11	2.00e-151	528.00
IUUC-Mmr-060649	Microcebus murinus	73.26	2.00e-154	538.00
IUUC-Mdo-062535	Monodelphis domestica	73.82	2.00e-152	531.00
IUUC-Mmu-064036	Mus musculus	73.67	3.00e-157	547.00
IUUC-Mac-065338	Musa acuminata	23.70	2.00e-05	44.70
IUUC-Mpu-065719	Mustela putorius furo	99.03	0.00e+00	763.00
IUUC-Mlu-067219	Myotis lucifugus	98.28	0.00e+00	743.00
IUUC-Ncr-068691	Neurospora crassa	22.36	4.00e-05	43.90
IUUC-Nle-068983	Nomascus leucogenys	74.37	9.00e-156	542.00
IUUC-Opr-070467	Ochotona princeps	98.94	0.00e+00	687.00
IUUC-Ont-071566	Oreochromis niloticus	92.16	0.00e+00	742.00
IUUC-Oan-073368	Ornithorhynchus anatinus	97.88	0.00e+00	673.00
IUUC-Ocu-074854	Oryctolagus cuniculus	73.54	2.00e-156	545.00
IUUC-Ome-081687	Oryza meridionalis	24.64	1.00e-03	38.10
IUUC-Ola-086364	Oryzias latipes	92.18	0.00e+00	739.00
IUUC-Oga-088235	Otolemur garnettii	72.14	2.00e-151	528.00
IUUC-Oar-089547	Ovis aries	100.00	0.00e+00	784.00
IUUC-Ptr-091423	Pan troglodytes	73.82	3.00e-155	541.00
IUUC-Pan-092378	Papio anubis	98.67	0.00e+00	686.00
IUUC-Psi-093638	Pelodiscus sinensis	72.35	2.00e-150	525.00
IUUC-Pma-094384	Petromyzon marinus	67.05	2.00e-53	201.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.66	1.00e-04	42.00
IUUC-Pfo-096031	Poecilia formosa	89.92	0.00e+00	682.00
IUUC-Pab-097886	Pongo abelii	74.37	9.00e-156	542.00
IUUC-Pop-099430	Populus trichocarpa	25.43	5.00e-06	47.00
IUUC-Pca-101138	Procavia capensis	98.94	0.00e+00	687.00
IUUC-Ppe-101293	Prunus persica	28.57	5.00e-06	46.20
IUUC-Pva-103215	Pteropus vampyrus	73.82	4.00e-156	543.00
IUUC-Pte-104238	Pyrenophora teres	24.41	2.00e-04	40.80
IUUC-Rno-105968	Rattus norvegicus	73.95	2.00e-157	548.00
IUUC-Sha-107595	Sarcophilus harrisii	98.25	0.00e+00	721.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	26.14	3.00e-06	47.00
IUUC-Smo-109552	Selaginella moellendorffii	18.85	8.00e-05	42.70
IUUC-Sly-110873	Solanum lycopersicum	31.96	7.00e-06	46.60
IUUC-Stu-112586	Solanum tuberosum	20.35	1.20e-02	35.40
IUUC-Sar-113076	Sorex araneus	71.98	4.00e-101	361.00
IUUC-Sre-115143	Sporisorium reilianum	18.93	4.00e-03	37.00
IUUC-Ssc-115755	Sus scrofa	99.47	0.00e+00	692.00
IUUC-Tgu-117326	Taeniopygia guttata	73.39	1.00e-151	529.00
IUUC-Tru-117858	Takifugu rubripes	72.39	4.00e-155	540.00
IUUC-Tsy-119296	Tarsius syrichta	68.25	8.00e-137	479.00
IUUC-Tni-119822	Tetraodon nigroviridis	87.85	2.00e-179	621.00
IUUC-Tca-120935	Theobroma cacao	28.57	3.00e-06	47.40
IUUC-Tbe-127366	Tupaia belangeri	97.35	0.00e+00	662.00
IUUC-Ttr-128484	Tursiops truncatus	73.64	2.00e-144	504.00
IUUC-Vpa-130304	Vicugna pacos	79.31	3.00e-116	410.00
IUUC-Vvi-131560	Vitis vinifera	28.42	8.00e-06	46.20
IUUC-Xtr-132062	Xenopus tropicalis	97.87	0.00e+00	682.00
IUUC-Xma-134288	Xiphophorus maculatus	92.75	0.00e+00	754.00
IUUC-Yli-134374	Yarrowia lipolytica	20.53	3.00e-06	47.00
IUUC-Zma-135310	Zea mays	22.10	4.00e-04	40.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence