iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049422

Ensembl Protein ID

ENSLACP00000021768.1

UniProt Accession

H3BIP7; H3BIP7_LATCH

Genbank Protein ID

ENSLACP00000021768

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01000840

Gene Name

GNB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000019130.1	ENSLACT00000021909.1	ENSLACP00000021768.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-41	139.3	224	259
UBD/Beta-Prp	3.70e-55	187.4	47	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++++++++f ++ + +++GsdD t++++Dlr + 
   Q: 224  GHESDINAICFfPNgNAFATGSDDATCRLFDLRADQ 259
           8*********99777*****************9875 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee. 131
           + r+l gh a+++a+ +  d+ +lv++s+D+ + +wd  t   vh++   ++ v+++++ psg++++ G+ d++  +++l+t++     
   Q: 47   TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRv 135
           5689******************************************************************************9877667 PP
   S: 132  ..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
              l+gh+g  +c ++ + +n +v++s D+t+ lWd++tg+  +t+tg ht++v sls+ ++++++vsg++d + klwd+++g c +t+
   Q: 136  srELAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDSRCFVSGACDASAKLWDIREGMCRQTF 222
           77**************99.78899***********************9.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           +gh++ ++ + f+pn++ +++gs+D + r++dlr ++ l ++++ 
   Q: 223  TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHD 267
           ************************************999888774 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSELDQLRQE AEQLKNQIRD ARKACADATL AQITANIDPV GRIQMRTRRT LRGHLAKIYA 60
MHWGTDSRLL VSASQDGKLI IWDSYTTNKV HAIPLRSSWV MTCAYAPSGN YVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCGTGGGGT TTCCCGTGCC TGTCTGCAGG GTTACCGCGC CCATCTCTTC GATGGCTGAC 60
GGAAACTGAG GGGAAGAGAG AGAGAAAAAA AAAAAAAAAA TTCTATCGGA GCCCGACGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048920--P:posterior lateral line neuromast primordium migration
GO:0007165--P:signal transduction

KEGG

lcm:102367354

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	50.74	3.00e-73	268.00
IUUC-Aml-001337	Ailuropoda melanoleuca	97.65	0.00e+00	657.00
IUUC-Atr-002610	Amborella trichopoda	49.35	1.00e-82	300.00
IUUC-Apl-003811	Anas platyrhynchos	99.41	0.00e+00	669.00
IUUC-Aca-004754	Anolis carolinensis	93.19	3.00e-172	597.00
IUUC-Aly-006025	Arabidopsis lyrata	50.00	4.00e-80	291.00
IUUC-Ath-006617	Arabidopsis thaliana	50.00	9.00e-80	290.00
IUUC-Ago-007831	Ashbya gossypii	37.98	1.00e-66	247.00
IUUC-Acl-008154	Aspergillus clavatus	69.14	2.00e-138	485.00
IUUC-Afl-008568	Aspergillus flavus	69.41	2.00e-140	491.00
IUUC-Afu-008789	Aspergillus fumigatus	69.14	3.00e-138	484.00
IUUC-Ani-009213	Aspergillus nidulans	69.12	1.00e-138	485.00
IUUC-Ang-009836	Aspergillus niger	69.12	1.00e-139	489.00
IUUC-Aor-010165	Aspergillus oryzae	69.41	2.00e-140	491.00
IUUC-Ate-010520	Aspergillus terreus	62.70	5.00e-109	387.00
IUUC-Ame-011092	Astyanax mexicanus	98.24	0.00e+00	694.00
IUUC-Bgr-012079	Blumeria graminis	67.55	1.00e-131	462.00
IUUC-Bta-012709	Bos taurus	97.65	0.00e+00	657.00
IUUC-Bci-013621	Botrytis cinerea	67.93	4.00e-130	457.00
IUUC-Bdi-014785	Brachypodium distachyon	51.28	4.00e-84	304.00
IUUC-Bol-015657	Brassica oleracea	50.32	6.00e-82	297.00
IUUC-Bra-017618	Brassica rapa	50.32	6.00e-82	297.00
IUUC-Cel-018704	Caenorhabditis elegans	86.76	2.00e-176	610.00
IUUC-Cja-019782	Callithrix jacchus	97.65	0.00e+00	657.00
IUUC-Cfa-020111	Canis familiaris	97.65	0.00e+00	657.00
IUUC-Cpo-022494	Cavia porcellus	97.65	0.00e+00	657.00
IUUC-Csa-023672	Chlorocebus sabaeus	97.65	0.00e+00	657.00
IUUC-Cho-024766	Choloepus hoffmanni	91.38	1.00e-173	602.00
IUUC-Cin-025309	Ciona intestinalis	79.88	5.00e-165	573.00
IUUC-Csv-026258	Ciona savignyi	80.18	2.00e-164	571.00
IUUC-Cgl-026673	Colletotrichum gloeosporioides	67.54	2.00e-134	471.00
IUUC-Cne-026811	Cryptococcus neoformans	68.17	2.00e-138	484.00
IUUC-Dre-027412	Danio rerio	98.53	0.00e+00	694.00
IUUC-Dno-029001	Dasypus novemcinctus	90.40	1.00e-172	599.00
IUUC-Dor-030322	Dipodomys ordii	81.11	1.00e-154	539.00
IUUC-Dse-031388	Dothistroma septosporum	68.82	4.00e-137	480.00
IUUC-Dme-031748	Drosophila melanogaster	84.41	2.00e-172	597.00
IUUC-Ete-032710	Echinops telfairi	89.94	1.00e-162	565.00
IUUC-Eca-033359	Equus caballus	97.65	0.00e+00	657.00
IUUC-Eeu-034978	Erinaceus europaeus	90.11	2.00e-140	491.00
IUUC-Fca-036537	Felis catus	90.40	1.00e-172	598.00
IUUC-Fal-037004	Ficedula albicollis	99.41	0.00e+00	667.00
IUUC-Fox-037946	Fusarium oxysporum	67.25	2.00e-128	451.00
IUUC-Fso-038136	Fusarium solani	67.25	2.00e-128	451.00
IUUC-Gmo-039709	Gadus morhua	98.24	0.00e+00	694.00
IUUC-Ggr-039969	Gaeumannomyces graminis	67.25	5.00e-134	470.00
IUUC-Gga-041163	Gallus gallus	99.08	0.00e+00	639.00
IUUC-Gac-041386	Gasterosteus aculeatus	97.65	0.00e+00	671.00
IUUC-Gma-043322	Glycine max	46.05	1.00e-87	316.00
IUUC-Ggo-044954	Gorilla gorilla	91.64	9.00e-173	598.00
IUUC-Hsa-046450	Homo sapiens	97.65	0.00e+00	657.00
IUUC-Hvu-047596	Hordeum vulgare	50.96	4.00e-83	301.00
IUUC-Itr-049064	Ictidomys tridecemlineatus	97.65	0.00e+00	657.00
IUUC-Kpa-049192	Komagataella pastoris	39.44	3.00e-62	232.00
IUUC-Lpe-051040	Leersia perrieri	51.28	1.00e-84	306.00
IUUC-Loc-052939	Lepisosteus oculatus	98.82	0.00e+00	696.00
IUUC-Lma-052985	Leptosphaeria maculans	68.56	2.00e-136	478.00
IUUC-Laf-054222	Loxodonta africana	97.65	0.00e+00	657.00
IUUC-Mcc-054970	Macaca mulatta	97.65	0.00e+00	657.00
IUUC-Meu-056902	Macropus eugenii	90.71	2.00e-173	600.00
IUUC-Mor-057188	Magnaporthe oryzae	66.96	2.00e-133	468.00
IUUC-Mpo-057544	Magnaporthe poae	66.96	2.00e-134	472.00
IUUC-Mtr-058752	Medicago truncatula	45.68	3.00e-86	311.00
IUUC-Mla-059086	Melampsora laricipopulina	73.19	3.00e-150	524.00
IUUC-Mga-060050	Meleagris gallopavo	92.90	3.00e-171	593.00
IUUC-Mvi-060482	Microbotryum violaceum	72.59	4.00e-149	520.00
IUUC-Mmr-061302	Microcebus murinus	97.65	0.00e+00	657.00
IUUC-Mdo-062044	Monodelphis domestica	98.24	0.00e+00	661.00
IUUC-Mmu-063323	Mus musculus	97.65	0.00e+00	657.00
IUUC-Mac-064871	Musa acuminata	45.96	1.00e-80	293.00
IUUC-Mpu-066358	Mustela putorius furo	91.95	5.00e-173	599.00
IUUC-Mlu-067309	Myotis lucifugus	97.65	0.00e+00	657.00
IUUC-Nfi-068332	Neosartorya fischeri	69.14	5.00e-138	483.00
IUUC-Ncr-068650	Neurospora crassa	66.08	6.00e-127	446.00
IUUC-Nle-069791	Nomascus leucogenys	97.65	0.00e+00	657.00
IUUC-Opr-070866	Ochotona princeps	90.40	1.00e-172	598.00
IUUC-Ont-071280	Oreochromis niloticus	98.53	0.00e+00	696.00
IUUC-Oan-072780	Ornithorhynchus anatinus	98.24	0.00e+00	662.00
IUUC-Ocu-073769	Oryctolagus cuniculus	97.65	0.00e+00	657.00
IUUC-Oba-075818	Oryza barthii	49.54	1.00e-81	296.00
IUUC-Obr-076229	Oryza brachyantha	50.64	4.00e-82	298.00
IUUC-Ogl-077730	Oryza glaberrima	51.60	5.00e-85	307.00
IUUC-Ogu-078583	Oryza glumaepatula	51.92	6.00e-67	247.00
IUUC-Oin-079661	Oryza indica	50.96	1.00e-81	296.00
IUUC-Olo-080225	Oryza longistaminata	51.92	6.00e-67	247.00
IUUC-Oni-082161	Oryza nivara	51.28	1.00e-84	306.00
IUUC-Opu-084072	Oryza punctata	51.60	2.00e-85	308.00
IUUC-Oru-084316	Oryza rufipogon	50.96	1.00e-81	296.00
IUUC-Osa-085380	Oryza sativa	50.96	1.00e-81	296.00
IUUC-Ola-087490	Oryzias latipes	98.16	0.00e+00	665.00
IUUC-Oga-087961	Otolemur garnettii	97.65	0.00e+00	657.00
IUUC-Oar-089360	Ovis aries	91.95	4.00e-173	600.00
IUUC-Ptr-091437	Pan troglodytes	91.95	3.00e-173	600.00
IUUC-Pan-092079	Papio anubis	97.65	0.00e+00	657.00
IUUC-Psi-093225	Pelodiscus sinensis	99.41	0.00e+00	667.00
IUUC-Pma-094748	Petromyzon marinus	91.67	1.00e-134	471.00
IUUC-Pno-095135	Phaeosphaeria nodorum	68.56	3.00e-136	477.00
IUUC-Ppa-095726	Physcomitrella patens	44.39	1.00e-74	273.00
IUUC-Pfo-097028	Poecilia formosa	98.53	0.00e+00	694.00
IUUC-Pab-098658	Pongo abelii	97.65	0.00e+00	657.00
IUUC-Pop-099370	Populus trichocarpa	51.94	3.00e-86	311.00
IUUC-Pca-100313	Procavia capensis	97.06	0.00e+00	646.00
IUUC-Ppe-102016	Prunus persica	45.76	2.00e-84	305.00
IUUC-Pva-102636	Pteropus vampyrus	97.35	0.00e+00	655.00
IUUC-Pgr-103321	Puccinia graminis	73.80	5.00e-151	526.00
IUUC-Ptt-103728	Puccinia triticina	73.80	5.00e-151	526.00
IUUC-Pte-104053	Pyrenophora teres	67.55	3.00e-136	478.00
IUUC-Pyt-104426	Pyrenophora triticirepentis	63.42	7.00e-124	436.00
IUUC-Rno-105112	Rattus norvegicus	97.65	0.00e+00	657.00
IUUC-Sce-106298	Saccharomyces cerevisiae	36.27	2.00e-64	239.00
IUUC-Sha-106856	Sarcophilus harrisii	98.24	0.00e+00	661.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	36.24	2.00e-55	209.00
IUUC-Spo-108352	Schizosaccharomyces pombe	42.00	3.00e-68	251.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	68.13	5.00e-130	457.00
IUUC-Smo-108835	Selaginella moellendorffii	44.01	3.00e-73	268.00
IUUC-Sit-110441	Setaria italica	51.28	2.00e-84	305.00
IUUC-Sly-111784	Solanum lycopersicum	50.65	2.00e-82	298.00
IUUC-Stu-112400	Solanum tuberosum	50.65	1.00e-82	299.00
IUUC-Sar-113642	Sorex araneus	92.65	2.00e-145	508.00
IUUC-Sbi-114038	Sorghum bicolor	50.64	3.00e-83	301.00
IUUC-Sre-115035	Sporisorium reilianum	69.97	1.00e-139	488.00
IUUC-Ssc-115595	Sus scrofa	90.40	1.00e-172	598.00
IUUC-Tgu-116775	Taeniopygia guttata	99.38	0.00e+00	638.00
IUUC-Tru-117828	Takifugu rubripes	98.82	0.00e+00	695.00
IUUC-Tsy-119354	Tarsius syrichta	90.09	1.00e-170	592.00
IUUC-Tni-120495	Tetraodon nigroviridis	97.94	0.00e+00	665.00
IUUC-Tca-121224	Theobroma cacao	51.94	6.00e-86	310.00
IUUC-Tre-122156	Trichoderma reesei	66.96	6.00e-133	466.00
IUUC-Tvi-122640	Trichoderma virens	66.96	6.00e-133	466.00
IUUC-Tae-125653	Triticum aestivum	50.64	5.00e-83	300.00
IUUC-Tur-126755	Triticum urartu	50.16	2.00e-83	304.00
IUUC-Tme-126886	Tuber melanosporum	70.66	6.00e-136	476.00
IUUC-Tbe-127694	Tupaia belangeri	69.04	1.00e-126	445.00
IUUC-Ttr-129243	Tursiops truncatus	91.95	3.00e-173	600.00
IUUC-Uma-129589	Ustilago maydis	70.27	5.00e-140	490.00
IUUC-Vda-129855	Verticillium dahliae	72.13	1.00e-127	449.00
IUUC-Vvi-131162	Vitis vinifera	51.94	4.00e-86	311.00
IUUC-Xtr-131924	Xenopus tropicalis	92.88	1.00e-171	595.00
IUUC-Xma-133743	Xiphophorus maculatus	98.53	0.00e+00	694.00
IUUC-Yli-134396	Yarrowia lipolytica	34.17	7.00e-62	230.00
IUUC-Zma-135893	Zea mays	50.32	6.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence