iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107093

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01035333

Gene Name

USP39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016049.1	ENSSHAT00000019062.1	ENSSHAP00000018906.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-51	175.4	163	493

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsg 86
           +Gl+N+ +  Y N+vLQ+Lsn+p+lr+++le+++ k  ++ p +    l++ + +l+++lw   + k +vsp+e+l+a+  ++++ f+ 
   Q: 163  VGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWnpRNFKAHVSPHEMLQAVVLCSKKtFQI 251
           6******************************9999999999********************999999**************99999*** PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk................sqikclec 159
           ++q D  +fl+++l++l+++l                          +kkk+k++++d+Fqg+++                +q+  ++ 
   Q: 252  TKQGDGVDFLSWFLNALHSAL------------------------GGTKKKKKTIVTDVFQGSMRiftkklphpdlpaeekEQLLHNDE 316
           *********************........................4578888889999999999888899999999998889******* PP
   S: 160  dnvssreepfldlslpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
            +++  e++f++l+l++p     k e          l ++L++f    e e    y++ k     +  k+++l+klP++Li+ +kRf  
   Q: 317  YQETMVESTFMYLTLDLPTAPLYKDEkeqliipqvPLFNILAKFNGITEKE----YKTYK----ENFLKRFQLTKLPPYLIFCIKRF-- 395
           ******************877776664455566666666666666666655....44333....3489*******************.. PP
   S: 240  seeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleet 326
           ++++ + ek+ + v+fp++ +dl+++++++ ++++++++Y+Lia +vH G++ +G Y  +v +  +gkW+++ D +Vt +  + +    
   Q: 396  TKNNFFVEKNPTIVNFPITnVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPTEGSYRIHVLHhGTGKWYELQDLQVTDILPQMITL-- 482
           88889********************************************************9935666******************9.. PP
   S: 327  gstaYvlfYkrr 338
            s+aY+ ++krr
   Q: 483  -SEAYIQIWKRR 493
           .********985 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

PGPAGPGTRV KREREADEDS EPEREGRVRY GRLDSEDRRS RHCPYLDTIN RSVLDFDFEK 60
LCSISLSHIN AYACLVCGKY FQGRGLKSHA YIHSVQFSHH VFLNLHTLKF YCLPDNYEII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGGGCCAG CGGGCTGNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	53.15	6.00e-128	450.00
IUUC-Aml-001846	Ailuropoda melanoleuca	96.62	0.00e+00	996.00
IUUC-Atr-002758	Amborella trichopoda	50.73	2.00e-128	452.00
IUUC-Apl-003336	Anas platyrhynchos	74.49	2.00e-176	611.00
IUUC-Aca-004846	Anolis carolinensis	97.14	0.00e+00	896.00
IUUC-Aly-005683	Arabidopsis lyrata	51.20	7.00e-117	414.00
IUUC-Ath-007661	Arabidopsis thaliana	50.55	2.00e-116	412.00
IUUC-Ago-007802	Ashbya gossypii	30.50	2.00e-59	223.00
IUUC-Acl-008304	Aspergillus clavatus	41.70	2.00e-91	330.00
IUUC-Afl-008735	Aspergillus flavus	58.97	1.00e-40	160.00
IUUC-Afu-009100	Aspergillus fumigatus	40.67	6.00e-89	321.00
IUUC-Ani-009138	Aspergillus nidulans	48.89	2.00e-93	336.00
IUUC-Ang-009661	Aspergillus niger	42.19	1.00e-94	340.00
IUUC-Aor-010235	Aspergillus oryzae	38.77	7.00e-79	288.00
IUUC-Ate-010346	Aspergillus terreus	36.52	1.00e-71	264.00
IUUC-Ame-011688	Astyanax mexicanus	89.89	0.00e+00	843.00
IUUC-Bgr-011998	Blumeria graminis	47.82	4.00e-114	404.00
IUUC-Bta-013407	Bos taurus	92.76	0.00e+00	981.00
IUUC-Bci-013977	Botrytis cinerea	48.91	5.00e-114	404.00
IUUC-Bdi-014361	Brachypodium distachyon	53.35	3.00e-134	471.00
IUUC-Bol-016317	Brassica oleracea	50.66	4.00e-115	408.00
IUUC-Bra-017952	Brassica rapa	50.00	1.00e-116	412.00
IUUC-Cel-018491	Caenorhabditis elegans	62.18	2.00e-176	612.00
IUUC-Cja-019134	Callithrix jacchus	97.59	0.00e+00	996.00
IUUC-Cfa-020098	Canis familiaris	97.02	0.00e+00	1001.00
IUUC-Cpo-021595	Cavia porcellus	97.74	0.00e+00	974.00
IUUC-Cre-022886	Chlamydomonas reinhardtii	50.81	4.00e-31	126.00
IUUC-Csa-024121	Chlorocebus sabaeus	97.59	0.00e+00	994.00
IUUC-Cho-025057	Choloepus hoffmanni	76.35	7.00e-85	307.00
IUUC-Cin-025473	Ciona intestinalis	63.55	5.00e-64	236.00
IUUC-Csv-025815	Ciona savignyi	82.05	3.00e-117	415.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	44.28	2.00e-107	382.00
IUUC-Cne-026802	Cryptococcus neoformans	42.97	5.00e-99	354.00
IUUC-Dre-027870	Danio rerio	89.51	0.00e+00	837.00
IUUC-Dno-029655	Dasypus novemcinctus	97.74	0.00e+00	977.00
IUUC-Dor-030762	Dipodomys ordii	98.15	0.00e+00	979.00
IUUC-Dse-031441	Dothistroma septosporum	45.59	7.00e-107	380.00
IUUC-Dme-032101	Drosophila melanogaster	65.13	5.00e-179	620.00
IUUC-Ete-032841	Echinops telfairi	91.65	0.00e+00	954.00
IUUC-Eca-033463	Equus caballus	97.98	0.00e+00	993.00
IUUC-Eeu-034438	Erinaceus europaeus	70.32	0.00e+00	691.00
IUUC-Fca-035774	Felis catus	97.22	0.00e+00	1002.00
IUUC-Fal-036988	Ficedula albicollis	93.28	0.00e+00	915.00
IUUC-Fox-037895	Fusarium oxysporum	45.36	8.00e-104	370.00
IUUC-Fso-038450	Fusarium solani	46.65	5.00e-105	374.00
IUUC-Gmo-038874	Gadus morhua	87.93	0.00e+00	821.00
IUUC-Ggr-040115	Gaeumannomyces graminis	44.40	4.00e-102	365.00
IUUC-Gac-041650	Gasterosteus aculeatus	86.23	0.00e+00	845.00
IUUC-Gma-043697	Glycine max	51.07	7.00e-128	450.00
IUUC-Ggo-044707	Gorilla gorilla	90.06	0.00e+00	914.00
IUUC-Hsa-046041	Homo sapiens	96.82	0.00e+00	996.00
IUUC-Hvu-047816	Hordeum vulgare	50.22	1.00e-121	429.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	98.81	0.00e+00	674.00
IUUC-Lch-050419	Latimeria chalumnae	92.03	0.00e+00	891.00
IUUC-Lpe-051593	Leersia perrieri	53.91	4.00e-134	471.00
IUUC-Loc-052930	Lepisosteus oculatus	86.29	0.00e+00	852.00
IUUC-Lma-053256	Leptosphaeria maculans	47.19	2.00e-111	395.00
IUUC-Laf-053555	Loxodonta africana	97.39	0.00e+00	990.00
IUUC-Mcc-055630	Macaca mulatta	97.59	0.00e+00	994.00
IUUC-Meu-056579	Macropus eugenii	95.99	0.00e+00	627.00
IUUC-Mor-057078	Magnaporthe oryzae	42.70	6.00e-103	367.00
IUUC-Mpo-057607	Magnaporthe poae	38.24	1.00e-83	303.00
IUUC-Mtr-058644	Medicago truncatula	49.57	2.00e-127	448.00
IUUC-Mla-059120	Melampsora laricipopulina	40.67	4.00e-99	355.00
IUUC-Mvi-060429	Microbotryum violaceum	45.60	5.00e-68	251.00
IUUC-Mmr-061313	Microcebus murinus	98.17	0.00e+00	990.00
IUUC-Mdo-062801	Monodelphis domestica	98.21	0.00e+00	1011.00
IUUC-Mmu-064424	Mus musculus	97.96	0.00e+00	987.00
IUUC-Mac-064694	Musa acuminata	51.17	8.00e-130	457.00
IUUC-Mpu-065980	Mustela putorius furo	99.05	0.00e+00	847.00
IUUC-Mlu-067007	Myotis lucifugus	98.15	0.00e+00	976.00
IUUC-Nfi-068274	Neosartorya fischeri	40.67	4.00e-89	322.00
IUUC-Ncr-068829	Neurospora crassa	46.67	5.00e-105	374.00
IUUC-Nle-069171	Nomascus leucogenys	98.94	0.00e+00	956.00
IUUC-Opr-070494	Ochotona princeps	89.94	0.00e+00	879.00
IUUC-Ont-072290	Oreochromis niloticus	86.15	0.00e+00	864.00
IUUC-Oan-073099	Ornithorhynchus anatinus	98.74	0.00e+00	956.00
IUUC-Ocu-074642	Oryctolagus cuniculus	97.77	0.00e+00	991.00
IUUC-Oba-075886	Oryza barthii	53.26	2.00e-133	469.00
IUUC-Obr-076220	Oryza brachyantha	53.26	1.00e-133	469.00
IUUC-Ogl-077682	Oryza glaberrima	53.26	8.00e-134	470.00
IUUC-Ogu-078492	Oryza glumaepatula	53.04	2.00e-133	468.00
IUUC-Oin-079956	Oryza indica	53.26	1.00e-133	470.00
IUUC-Olo-080239	Oryza longistaminata	46.82	3.00e-105	376.00
IUUC-Ome-081573	Oryza meridionalis	53.26	6.00e-134	471.00
IUUC-Oni-082975	Oryza nivara	53.26	1.00e-133	470.00
IUUC-Opu-083724	Oryza punctata	53.48	6.00e-134	470.00
IUUC-Oru-084566	Oryza rufipogon	53.26	1.00e-133	470.00
IUUC-Osa-086008	Oryza sativa	53.26	7.00e-134	470.00
IUUC-Ola-086967	Oryzias latipes	89.85	0.00e+00	845.00
IUUC-Olu-087614	Ostreococcus lucimarinus	43.70	7.00e-97	347.00
IUUC-Oga-088047	Otolemur garnettii	80.10	0.00e+00	650.00
IUUC-Oar-089393	Ovis aries	97.22	0.00e+00	1002.00
IUUC-Ptr-090561	Pan troglodytes	96.82	0.00e+00	996.00
IUUC-Pan-091812	Papio anubis	97.59	0.00e+00	995.00
IUUC-Psi-093507	Pelodiscus sinensis	99.32	2.00e-170	590.00
IUUC-Pno-095104	Phaeosphaeria nodorum	46.50	5.00e-109	388.00
IUUC-Ppa-095995	Physcomitrella patens	51.84	9.00e-135	473.00
IUUC-Pfo-096754	Poecilia formosa	89.44	0.00e+00	860.00
IUUC-Pab-098053	Pongo abelii	96.82	0.00e+00	996.00
IUUC-Pop-099230	Populus trichocarpa	51.13	1.00e-133	469.00
IUUC-Pca-100407	Procavia capensis	90.12	0.00e+00	895.00
IUUC-Ppe-101699	Prunus persica	52.39	5.00e-128	451.00
IUUC-Pva-103159	Pteropus vampyrus	94.62	0.00e+00	953.00
IUUC-Pgr-103433	Puccinia graminis	42.62	5.00e-103	368.00
IUUC-Ptt-103701	Puccinia triticina	39.44	3.00e-91	328.00
IUUC-Pte-104281	Pyrenophora teres	47.17	3.00e-111	395.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	47.17	6.00e-111	394.00
IUUC-Rno-105531	Rattus norvegicus	96.82	0.00e+00	1001.00
IUUC-Sce-106368	Saccharomyces cerevisiae	29.11	4.00e-46	178.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	44.81	7.00e-113	400.00
IUUC-Spo-108018	Schizosaccharomyces pombe	47.38	3.00e-112	398.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	46.44	1.00e-105	376.00
IUUC-Smo-108892	Selaginella moellendorffii	52.80	2.00e-132	465.00
IUUC-Sit-110782	Setaria italica	54.41	5.00e-136	477.00
IUUC-Sly-111308	Solanum lycopersicum	52.16	8.00e-138	483.00
IUUC-Stu-112447	Solanum tuberosum	53.04	1.00e-136	479.00
IUUC-Sar-113352	Sorex araneus	92.14	0.00e+00	775.00
IUUC-Sbi-114806	Sorghum bicolor	54.96	3.00e-135	475.00
IUUC-Sre-115059	Sporisorium reilianum	54.36	8.00e-72	264.00
IUUC-Ssc-115677	Sus scrofa	95.36	0.00e+00	712.00
IUUC-Tru-118478	Takifugu rubripes	86.82	0.00e+00	859.00
IUUC-Tsy-119082	Tarsius syrichta	85.71	0.00e+00	726.00
IUUC-Tni-120419	Tetraodon nigroviridis	86.25	0.00e+00	839.00
IUUC-Tca-121294	Theobroma cacao	49.50	3.00e-134	471.00
IUUC-Tre-121962	Trichoderma reesei	45.81	9.00e-101	360.00
IUUC-Tvi-122280	Trichoderma virens	45.47	5.00e-108	384.00
IUUC-Tae-124442	Triticum aestivum	54.21	2.00e-134	472.00
IUUC-Tur-126551	Triticum urartu	54.21	6.00e-134	470.00
IUUC-Tme-126959	Tuber melanosporum	47.07	2.00e-112	399.00
IUUC-Tbe-127737	Tupaia belangeri	94.05	0.00e+00	924.00
IUUC-Ttr-129211	Tursiops truncatus	95.57	1.00e-157	549.00
IUUC-Uma-129591	Ustilago maydis	39.16	2.00e-95	342.00
IUUC-Vda-129674	Verticillium dahliae	44.09	2.00e-94	339.00
IUUC-Vpa-130793	Vicugna pacos	87.06	0.00e+00	852.00
IUUC-Xtr-132430	Xenopus tropicalis	90.46	0.00e+00	886.00
IUUC-Xma-133515	Xiphophorus maculatus	89.30	0.00e+00	849.00
IUUC-Yli-134488	Yarrowia lipolytica	38.19	2.00e-79	289.00
IUUC-Zma-134748	Zea mays	54.72	1.00e-135	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence