iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d026582	Zm00001d026582_T002	Zm00001d026582_T002
Zm00001d026582	Zm00001d026582_T001	Zm00001d026582_T001
Zm00001d026582	Zm00001d026582_T003	Zm00001d026582_T003
Zm00001d026582	Zm00001d026582_T007	Zm00001d026582_T007
Zm00001d026582	Zm00001d026582_T005	Zm00001d026582_T005
Zm00001d026582	Zm00001d026582_T006	Zm00001d026582_T006

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	5.60e-08	35.2	417	491

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 4    eqatlqiRlpdGkrlvrkFpssttleqiyqfve.yllvessdpFeLvspfP..rrtlkpeehmstlqeagLvpsgs 76
             ++++iRlp+++r++r+F ++++++ ++ f++ + +  ++  F +v+++P    +l+  +   t   agL++s++
   Q: 417  LLCRVAIRLPNNQRIQRNFLHTDPIKLLWSFCApQVEDGEKRAFHFVQAIPgaSQKLQFGSD-LTFRKAGLANSMI 491
           479******************************9999999999********87455544333.3999999999987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAGDPPTAAE KETLVSSFIE ITAGQTLETA TQFLQMTSWH LEEALQLFYI DGEAAHTAAH 60
SVDPSPAAAA PSALAAAAGV EEAMRFAPPP AAALGDAMSH GFGVREDDDV RAPLPVKRET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTTCATCA CCCGCACGCT TTCTTCCACT TCTCTTTTCC TTACTTCCCA AACCCACCCT 60
CCCAAGTCCC AAGCCCACCG AACCCTACTC ACCAACCCAC CCGCAGGAGA ACGGAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012336--Thioredoxin-like_fold
IPR006577--UAS
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom
IPR003903--UIM_dom

PROSITE

PS50033--UBX
PS50330--UIM

Pfam

PF00789--UBX

SMART

SM00594--UAS

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004442	Anolis carolinensis	38.21	2.00e-35	142.00
IUUC-Ago-007718	Ashbya gossypii	37.93	3.00e-21	95.90
IUUC-Cpo-021430	Cavia porcellus	37.25	3.00e-32	132.00
IUUC-Dme-031981	Drosophila melanogaster	42.31	1.00e-25	110.00
IUUC-Ete-033025	Echinops telfairi	34.80	2.00e-30	126.00
IUUC-Fso-038081	Fusarium solani	29.26	1.00e-19	90.90
IUUC-Ggo-044872	Gorilla gorilla	41.04	7.00e-21	94.70
IUUC-Lch-049556	Latimeria chalumnae	36.41	4.00e-34	138.00
IUUC-Ncr-068638	Neurospora crassa	25.41	3.00e-24	106.00
IUUC-Opr-071163	Ochotona princeps	36.31	2.00e-30	125.00
IUUC-Oan-073323	Ornithorhynchus anatinus	43.75	2.00e-20	90.10
IUUC-Olo-080898	Oryza longistaminata	70.75	2.00e-164	571.00
IUUC-Oni-082128	Oryza nivara	71.06	0.00e+00	659.00
IUUC-Pva-103250	Pteropus vampyrus	39.64	6.00e-30	124.00
IUUC-Tme-126975	Tuber melanosporum	28.21	8.00e-24	104.00
IUUC-Tbe-128096	Tupaia belangeri	34.65	4.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence