iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111575

Ensembl Protein ID

Solyc12g100000.1.1

UniProt Accession

K4DI21; K4DI21_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g100000.1	Solyc12g100000.1.1	Solyc12g100000.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-30	104.1	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv++++G+ty+r+ I++w++ g + cP+trq l +++l+Pn+t+++li +wce+n++
   Q: 236  IPPDFCCPLSLELMTDPVIVATGQTYERAFIREWIDLGLTVCPKTRQMLGHTTLIPNYTVKALIANWCESNNV 308
           8********************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEISLLKVLL SSISQFFHLS SSENITDILV QRYYCKAEDL LKILKPILEA IVDVEAASSE 60
MLQKAFAGLA QSVDELRELC ETWQPLGSNV YFVLQVEPLI VKTRTCSLEF LELLKTSHEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATAT CGTTGTTAAA AGTTCTTCTC AGCAGCATCT CCCAATTTTT CCATTTATCA 60
TCTAGTGAAA ACATAACTGA TATTCTAGTT CAGAGGTATT ATTGCAAGGC TGAGGATCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101244851

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Fso-038217	Fusarium solani	28.24	1.00e-15	77.40
IUUC-Pgr-103316	Puccinia graminis	25.00	1.80e+00	28.50
IUUC-Ptt-103922	Puccinia triticina	29.34	3.00e-08	52.00
IUUC-Sce-106415	Saccharomyces cerevisiae	33.33	1.00e-20	94.00
IUUC-Stu-112751	Solanum tuberosum	93.68	0.00e+00	1478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence