iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_020436	EOY05426	EOY05426
TCM_020436	EOY05425	EOY05425
TCM_020436	EOY05427	EOY05427
TCM_020436	EOY05428	EOY05428

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.00e-09	36.5	191	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C + + +e  +v C++  C+ ewfH++C++l+   e+p+ + w+C++C 
   Q: 191  TYC-LCNQVSYGE--MVACDNpdCKiEWFHFGCVGLK---EQPKGK-WYCSDCA 237
           69*.*******99..**********************...999997.******7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSFIDEFQAD LEALPNILQK KYALMRDLDK SLQEIVRQNE QRCEQEIEDI RRGVRAGNIT 60
PDTSLLRFSD EALDEQKHSI RIADEKVALA IQAYDLVDSH IQQLDQYLKK SDEELRRERE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGTGGCGG GACGAAAATC TGGGACATTT CCCATCGAAA TTCAACTGCC AAATTCTAAA 60
ACCCTAAATC CCTAAAATGT CCTTCATCGA TGAATTTCAA GCCGGTAACT TCTCCCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

tcc:TCM_020436

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001338	Ailuropoda melanoleuca	33.08	1.00e-35	142.00
IUUC-Atr-002906	Amborella trichopoda	61.13	7.00e-77	279.00
IUUC-Apl-004097	Anas platyrhynchos	34.01	8.00e-36	142.00
IUUC-Aca-004593	Anolis carolinensis	32.94	2.00e-36	144.00
IUUC-Aly-005815	Arabidopsis lyrata	62.20	2.00e-74	270.00
IUUC-Ath-006765	Arabidopsis thaliana	63.82	4.00e-76	276.00
IUUC-Acl-008091	Aspergillus clavatus	62.96	3.00e-19	89.70
IUUC-Ate-010297	Aspergillus terreus	61.11	8.00e-19	88.20
IUUC-Ame-011133	Astyanax mexicanus	36.02	3.00e-38	150.00
IUUC-Bta-012699	Bos taurus	34.73	8.00e-37	146.00
IUUC-Bdi-014504	Brachypodium distachyon	56.91	4.00e-76	276.00
IUUC-Bol-015245	Brassica oleracea	67.48	9.00e-78	282.00
IUUC-Bra-017027	Brassica rapa	67.48	2.00e-77	281.00
IUUC-Cja-019988	Callithrix jacchus	31.82	3.00e-34	137.00
IUUC-Cfa-020620	Canis familiaris	33.73	1.00e-36	145.00
IUUC-Cpo-022085	Cavia porcellus	33.61	6.00e-33	133.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	38.95	9.00e-28	116.00
IUUC-Csa-023203	Chlorocebus sabaeus	31.82	3.00e-34	137.00
IUUC-Cho-025039	Choloepus hoffmanni	70.15	2.00e-28	119.00
IUUC-Cin-025479	Ciona intestinalis	38.08	4.00e-38	150.00
IUUC-Csv-026288	Ciona savignyi	31.62	1.00e-33	135.00
IUUC-Cne-027005	Cryptococcus neoformans	49.02	2.00e-12	65.50
IUUC-Dre-027588	Danio rerio	35.41	2.00e-37	148.00
IUUC-Dno-029766	Dasypus novemcinctus	32.81	8.00e-34	135.00
IUUC-Dor-030910	Dipodomys ordii	68.75	2.00e-27	115.00
IUUC-Dse-031323	Dothistroma septosporum	54.69	4.00e-17	82.80
IUUC-Dme-032200	Drosophila melanogaster	69.84	1.00e-28	119.00
IUUC-Ete-032510	Echinops telfairi	68.66	2.00e-27	116.00
IUUC-Eca-033493	Equus caballus	36.07	2.00e-35	141.00
IUUC-Eeu-034948	Erinaceus europaeus	32.03	1.00e-33	135.00
IUUC-Fca-035635	Felis catus	73.44	8.00e-29	119.00
IUUC-Fal-036998	Ficedula albicollis	35.48	1.00e-34	139.00
IUUC-Fox-037925	Fusarium oxysporum	64.44	4.00e-17	81.60
IUUC-Gmo-038982	Gadus morhua	35.94	5.00e-39	153.00
IUUC-Gga-040771	Gallus gallus	32.94	2.00e-36	144.00
IUUC-Gac-042184	Gasterosteus aculeatus	34.52	3.00e-38	150.00
IUUC-Gma-044339	Glycine max	71.14	1.00e-93	335.00
IUUC-Ggo-045559	Gorilla gorilla	31.82	3.00e-34	137.00
IUUC-Hsa-046852	Homo sapiens	31.82	3.00e-34	137.00
IUUC-Hvu-047046	Hordeum vulgare	50.18	3.00e-69	253.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	33.58	6.00e-37	146.00
IUUC-Kpa-049229	Komagataella pastoris	54.90	7.00e-16	76.60
IUUC-Lch-049419	Latimeria chalumnae	65.71	4.00e-28	118.00
IUUC-Lpe-050822	Leersia perrieri	54.25	2.00e-73	268.00
IUUC-Loc-052725	Lepisosteus oculatus	35.12	2.00e-35	141.00
IUUC-Lma-053234	Leptosphaeria maculans	51.72	1.00e-15	78.20
IUUC-Laf-054057	Loxodonta africana	31.82	2.00e-34	138.00
IUUC-Mcc-055455	Macaca mulatta	35.04	8.00e-34	135.00
IUUC-Meu-056848	Macropus eugenii	68.66	2.00e-27	115.00
IUUC-Mtr-058089	Medicago truncatula	76.92	1.00e-93	334.00
IUUC-Mga-059312	Meleagris gallopavo	38.86	2.00e-31	127.00
IUUC-Mmr-061351	Microcebus murinus	37.12	3.00e-33	134.00
IUUC-Mdo-062357	Monodelphis domestica	33.08	1.00e-36	145.00
IUUC-Mmu-063201	Mus musculus	33.20	4.00e-33	134.00
IUUC-Mac-064625	Musa acuminata	63.16	1.00e-89	321.00
IUUC-Mpu-066530	Mustela putorius furo	68.66	7.00e-28	117.00
IUUC-Mlu-068192	Myotis lucifugus	34.43	2.00e-33	135.00
IUUC-Nle-069062	Nomascus leucogenys	31.82	3.00e-34	137.00
IUUC-Opr-070207	Ochotona princeps	34.75	1.00e-34	139.00
IUUC-Ont-072446	Oreochromis niloticus	33.97	3.00e-37	147.00
IUUC-Oan-073641	Ornithorhynchus anatinus	68.66	1.00e-27	116.00
IUUC-Ocu-073871	Oryctolagus cuniculus	32.16	2.00e-31	128.00
IUUC-Obr-076266	Oryza brachyantha	54.66	4.00e-74	270.00
IUUC-Ogl-077118	Oryza glaberrima	64.17	7.00e-41	159.00
IUUC-Oin-079049	Oryza indica	64.17	7.00e-41	159.00
IUUC-Ome-081291	Oryza meridionalis	48.22	1.00e-63	235.00
IUUC-Oni-082218	Oryza nivara	64.17	7.00e-41	159.00
IUUC-Opu-084171	Oryza punctata	64.60	5.00e-38	150.00
IUUC-Osa-085563	Oryza sativa	48.22	1.00e-63	235.00
IUUC-Ola-086429	Oryzias latipes	33.07	2.00e-32	131.00
IUUC-Oga-089123	Otolemur garnettii	31.82	2.00e-34	138.00
IUUC-Oar-089524	Ovis aries	34.73	8.00e-37	146.00
IUUC-Ptr-090908	Pan troglodytes	32.20	3.00e-34	137.00
IUUC-Pan-092837	Papio anubis	33.08	2.00e-35	141.00
IUUC-Psi-093904	Pelodiscus sinensis	40.12	7.00e-32	129.00
IUUC-Pma-094144	Petromyzon marinus	68.66	7.00e-27	112.00
IUUC-Pfo-096617	Poecilia formosa	35.83	4.00e-39	153.00
IUUC-Pab-097549	Pongo abelii	68.66	8.00e-28	117.00
IUUC-Pop-099415	Populus trichocarpa	77.24	1.00e-91	328.00
IUUC-Pca-100600	Procavia capensis	68.75	1.00e-27	115.00
IUUC-Ppe-101441	Prunus persica	72.36	9.00e-96	341.00
IUUC-Pva-102282	Pteropus vampyrus	34.71	7.00e-35	139.00
IUUC-Pte-104284	Pyrenophora teres	50.00	8.00e-16	78.60
IUUC-Pyt-104787	Pyrenophora triticirepentis	53.45	5.00e-16	79.30
IUUC-Rno-105178	Rattus norvegicus	35.14	2.00e-38	151.00
IUUC-Sce-106421	Saccharomyces cerevisiae	44.44	4.00e-06	45.10
IUUC-Sha-107031	Sarcophilus harrisii	34.62	2.00e-33	135.00
IUUC-Smo-109441	Selaginella moellendorffii	39.51	7.00e-49	186.00
IUUC-Sit-109827	Setaria italica	55.28	9.00e-72	262.00
IUUC-Sly-111750	Solanum lycopersicum	68.70	3.00e-87	313.00
IUUC-Stu-112250	Solanum tuberosum	68.70	3.00e-87	313.00
IUUC-Sar-113193	Sorex araneus	68.66	9.00e-28	117.00
IUUC-Sbi-114826	Sorghum bicolor	53.66	3.00e-74	270.00
IUUC-Sre-115124	Sporisorium reilianum	57.58	1.00e-22	100.00
IUUC-Ssc-115797	Sus scrofa	34.44	8.00e-35	139.00
IUUC-Tgu-117270	Taeniopygia guttata	32.94	2.00e-36	144.00
IUUC-Tru-118253	Takifugu rubripes	35.16	5.00e-39	153.00
IUUC-Tsy-119035	Tarsius syrichta	68.66	2.00e-27	115.00
IUUC-Tni-119775	Tetraodon nigroviridis	37.10	8.00e-35	139.00
IUUC-Tre-121950	Trichoderma reesei	60.00	7.00e-20	91.70
IUUC-Tvi-122341	Trichoderma virens	61.11	5.00e-15	72.80
IUUC-Tae-123043	Triticum aestivum	51.84	6.00e-76	276.00
IUUC-Tbe-127558	Tupaia belangeri	33.08	1.00e-35	142.00
IUUC-Ttr-128300	Tursiops truncatus	69.84	7.00e-28	116.00
IUUC-Uma-129581	Ustilago maydis	64.29	8.00e-23	101.00
IUUC-Vpa-130063	Vicugna pacos	69.64	5.00e-24	103.00
IUUC-Vvi-131487	Vitis vinifera	76.89	2.00e-92	330.00
IUUC-Xtr-132189	Xenopus tropicalis	34.84	2.00e-35	141.00
IUUC-Xma-133297	Xiphophorus maculatus	35.80	2.00e-36	144.00
IUUC-Yli-134326	Yarrowia lipolytica	56.14	6.00e-18	83.60
IUUC-Zma-135298	Zea mays	60.00	3.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence