iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000004583.6	ENSGALT00000089593.1	ENSGALP00000058755.1
ENSGALG00000004583.6	ENSGALT00000076743.1	ENSGALP00000045125.1
ENSGALG00000004583.6	ENSGALT00000007292.5	ENSGALP00000007280.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	2.40e-11	43.3	583	609

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 3    aqWaCsaCTflNePeavkCemCsrpRg 29
           a+WaC++CTf+N+P + +CemCs pR+
   Q: 583  AMWACQHCTFMNQPGTDHCEMCSLPRT 609
           79***********************95 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MAETIIIRVQ SPEGVKRITA TKRETVATFL KKVAKEFGFR NNGFSVYTNR NRTGEITASQ 60
NKSLNLLKIK HGDMLFLYPS SPAGSSSETM DTSVSQGLRP VGAPQVVEDD IDQYLIKQDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCTGTG CGGGCAGCGC CATGGCGGAG ACGATCGTGA GTGAGGCCCG GAGGAGGCGG 60
TGTGGGGCGG CGAGGGCGGA GGAGGGGCGA TGAGGCAGCA GATTCCTGTG GGGCGGGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome

Interpro

IPR016563--Npl4
IPR007717--NPL4_C
IPR024682--Npl4_Ub-like_dom
IPR007716--NPL4_Zn-bd_put
IPR029071--Ubiquitin-rel_dom
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF05021--NPL4
PF11543--UN_NPL4
PF05020--zf-NPL4

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0043130--F:ubiquitin binding
GO:0031625--F:ubiquitin protein ligase binding
GO:0008270--F:zinc ion binding
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000460	Aegilops tauschii	26.59	3.00e-14	72.80
IUUC-Aml-002268	Ailuropoda melanoleuca	92.22	0.00e+00	1154.00
IUUC-Atr-002939	Amborella trichopoda	27.44	6.00e-18	84.70
IUUC-Apl-003496	Anas platyrhynchos	95.37	0.00e+00	1155.00
IUUC-Aca-005230	Anolis carolinensis	93.43	0.00e+00	1209.00
IUUC-Aly-006056	Arabidopsis lyrata	28.87	1.00e-21	97.40
IUUC-Ath-006993	Arabidopsis thaliana	27.78	6.00e-20	91.70
IUUC-Ago-007954	Ashbya gossypii	36.17	1.00e-78	286.00
IUUC-Acl-008208	Aspergillus clavatus	35.99	4.00e-94	338.00
IUUC-Afl-008574	Aspergillus flavus	36.40	4.00e-91	328.00
IUUC-Afu-008825	Aspergillus fumigatus	34.92	2.00e-97	349.00
IUUC-Ani-009495	Aspergillus nidulans	40.13	3.00e-95	342.00
IUUC-Ang-009762	Aspergillus niger	34.00	8.00e-92	331.00
IUUC-Aor-010199	Aspergillus oryzae	34.32	4.00e-90	325.00
IUUC-Ate-010592	Aspergillus terreus	38.95	1.00e-93	337.00
IUUC-Ame-011587	Astyanax mexicanus	57.30	0.00e+00	634.00
IUUC-Bgr-012124	Blumeria graminis	32.69	5.00e-89	322.00
IUUC-Bta-013312	Bos taurus	92.45	0.00e+00	1193.00
IUUC-Bci-013648	Botrytis cinerea	33.17	2.00e-95	342.00
IUUC-Bdi-014326	Brachypodium distachyon	27.17	6.00e-15	75.10
IUUC-Bol-016294	Brassica oleracea	27.86	6.00e-20	91.70
IUUC-Bra-017023	Brassica rapa	27.86	6.00e-20	91.70
IUUC-Cel-018713	Caenorhabditis elegans	43.63	5.00e-130	457.00
IUUC-Cja-018869	Callithrix jacchus	91.79	0.00e+00	1164.00
IUUC-Cfa-020757	Canis familiaris	92.56	0.00e+00	1167.00
IUUC-Cpo-022390	Cavia porcellus	92.72	0.00e+00	1153.00
IUUC-Csa-023366	Chlorocebus sabaeus	92.28	0.00e+00	1192.00
IUUC-Cho-024455	Choloepus hoffmanni	85.71	0.00e+00	754.00
IUUC-Cin-025638	Ciona intestinalis	49.37	2.00e-148	518.00
IUUC-Csv-026310	Ciona savignyi	45.78	3.00e-136	478.00
IUUC-Cgl-026685	Colletotrichum gloeosporioides	32.86	8.00e-91	327.00
IUUC-Cne-026794	Cryptococcus neoformans	28.55	7.00e-71	261.00
IUUC-Cme-027248	Cyanidioschyzon merolae	27.56	4.00e-16	79.30
IUUC-Dre-027689	Danio rerio	82.30	0.00e+00	1065.00
IUUC-Dno-030004	Dasypus novemcinctus	91.30	0.00e+00	1166.00
IUUC-Dor-030585	Dipodomys ordii	92.83	0.00e+00	943.00
IUUC-Dse-031202	Dothistroma septosporum	33.89	1.00e-89	323.00
IUUC-Dme-032092	Drosophila melanogaster	49.44	7.00e-179	620.00
IUUC-Ete-033009	Echinops telfairi	94.22	4.00e-98	351.00
IUUC-Eca-034001	Equus caballus	92.12	0.00e+00	1192.00
IUUC-Eeu-034485	Erinaceus europaeus	77.57	0.00e+00	800.00
IUUC-Fca-036128	Felis catus	91.63	0.00e+00	1139.00
IUUC-Fal-037523	Ficedula albicollis	97.21	0.00e+00	1249.00
IUUC-Fox-037802	Fusarium oxysporum	34.83	8.00e-99	354.00
IUUC-Fso-038152	Fusarium solani	33.44	9.00e-96	344.00
IUUC-Gmo-038486	Gadus morhua	77.03	0.00e+00	986.00
IUUC-Ggr-039916	Gaeumannomyces graminis	37.66	2.00e-86	313.00
IUUC-Gac-042304	Gasterosteus aculeatus	79.29	0.00e+00	1001.00
IUUC-Gma-044178	Glycine max	26.62	6.00e-15	75.10
IUUC-Ggo-045236	Gorilla gorilla	88.74	0.00e+00	1126.00
IUUC-Hsa-046334	Homo sapiens	92.28	0.00e+00	1191.00
IUUC-Hvu-047323	Hordeum vulgare	26.46	1.00e-08	52.80
IUUC-Itr-047878	Ictidomys tridecemlineatus	90.27	0.00e+00	680.00
IUUC-Lch-050302	Latimeria chalumnae	83.93	0.00e+00	1078.00
IUUC-Lpe-051362	Leersia perrieri	26.55	1.00e-16	80.50
IUUC-Loc-052548	Lepisosteus oculatus	83.98	0.00e+00	1047.00
IUUC-Lma-053092	Leptosphaeria maculans	34.10	3.00e-96	345.00
IUUC-Laf-053911	Loxodonta africana	91.64	0.00e+00	1177.00
IUUC-Mcc-055830	Macaca mulatta	91.85	0.00e+00	1166.00
IUUC-Meu-056460	Macropus eugenii	56.35	8.00e-141	493.00
IUUC-Mor-057189	Magnaporthe oryzae	32.69	7.00e-89	321.00
IUUC-Mpo-057366	Magnaporthe poae	33.12	5.00e-88	318.00
IUUC-Mtr-057834	Medicago truncatula	26.33	6.00e-17	81.60
IUUC-Mla-059190	Melampsora laricipopulina	31.14	3.00e-84	306.00
IUUC-Mga-060036	Meleagris gallopavo	99.67	0.00e+00	1266.00
IUUC-Mvi-060275	Microbotryum violaceum	34.48	3.00e-79	289.00
IUUC-Mmr-061300	Microcebus murinus	92.38	0.00e+00	1180.00
IUUC-Mdo-062911	Monodelphis domestica	93.69	0.00e+00	1029.00
IUUC-Mmu-063916	Mus musculus	92.28	0.00e+00	1166.00
IUUC-Mac-065601	Musa acuminata	32.31	2.00e-11	63.50
IUUC-Mpu-065912	Mustela putorius furo	91.74	0.00e+00	1157.00
IUUC-Mlu-067965	Myotis lucifugus	90.31	0.00e+00	1139.00
IUUC-Nfi-068465	Neosartorya fischeri	35.08	8.00e-98	351.00
IUUC-Ncr-068936	Neurospora crassa	34.16	1.00e-94	340.00
IUUC-Nle-069570	Nomascus leucogenys	91.79	0.00e+00	1184.00
IUUC-Opr-071097	Ochotona princeps	87.09	0.00e+00	882.00
IUUC-Ont-071430	Oreochromis niloticus	81.47	0.00e+00	1059.00
IUUC-Oan-073709	Ornithorhynchus anatinus	80.65	0.00e+00	773.00
IUUC-Ocu-074875	Oryctolagus cuniculus	87.27	0.00e+00	1096.00
IUUC-Oba-075214	Oryza barthii	26.64	1.00e-16	80.90
IUUC-Obr-076758	Oryza brachyantha	27.72	1.00e-16	80.10
IUUC-Ogl-077665	Oryza glaberrima	26.64	1.00e-16	80.90
IUUC-Ogu-078899	Oryza glumaepatula	26.64	1.00e-16	80.90
IUUC-Oin-079167	Oryza indica	26.64	1.00e-16	80.90
IUUC-Olo-080451	Oryza longistaminata	26.64	8.00e-17	80.90
IUUC-Ome-081836	Oryza meridionalis	27.01	1.00e-16	80.50
IUUC-Oni-083019	Oryza nivara	26.64	1.00e-16	80.90
IUUC-Opu-083122	Oryza punctata	27.21	5.00e-17	82.00
IUUC-Oru-084900	Oryza rufipogon	26.64	1.00e-16	80.90
IUUC-Osa-086054	Oryza sativa	26.64	1.00e-16	80.90
IUUC-Ola-087077	Oryzias latipes	70.75	0.00e+00	878.00
IUUC-Olu-087601	Ostreococcus lucimarinus	25.55	7.00e-05	41.60
IUUC-Oga-088049	Otolemur garnettii	78.91	0.00e+00	997.00
IUUC-Oar-089678	Ovis aries	92.26	0.00e+00	1188.00
IUUC-Ptr-091380	Pan troglodytes	91.31	0.00e+00	1082.00
IUUC-Pan-092821	Papio anubis	91.23	0.00e+00	1167.00
IUUC-Psi-093074	Pelodiscus sinensis	95.54	0.00e+00	1222.00
IUUC-Pma-094102	Petromyzon marinus	69.29	0.00e+00	907.00
IUUC-Pno-094987	Phaeosphaeria nodorum	34.48	1.00e-95	344.00
IUUC-Ppa-095368	Physcomitrella patens	27.84	2.00e-18	86.30
IUUC-Pfo-097245	Poecilia formosa	82.32	0.00e+00	1019.00
IUUC-Pab-098763	Pongo abelii	92.55	0.00e+00	1186.00
IUUC-Pop-099355	Populus trichocarpa	29.10	3.00e-14	72.00
IUUC-Ppe-101990	Prunus persica	27.65	3.00e-17	82.80
IUUC-Pva-102308	Pteropus vampyrus	84.41	0.00e+00	923.00
IUUC-Pgr-103553	Puccinia graminis	31.33	8.00e-81	294.00
IUUC-Pte-104100	Pyrenophora teres	33.22	5.00e-92	331.00
IUUC-Pyt-104482	Pyrenophora triticirepentis	32.41	8.00e-92	331.00
IUUC-Rno-105582	Rattus norvegicus	92.12	0.00e+00	1164.00
IUUC-Sce-106145	Saccharomyces cerevisiae	34.98	1.00e-91	330.00
IUUC-Sha-106647	Sarcophilus harrisii	93.74	0.00e+00	1169.00
IUUC-Sja-107972	Schizosaccharomyces japonicus	35.77	8.00e-87	314.00
IUUC-Spo-108281	Schizosaccharomyces pombe	34.44	2.00e-92	332.00
IUUC-Ssl-108617	Sclerotinia sclerotiorum	34.36	2.00e-92	332.00
IUUC-Smo-108933	Selaginella moellendorffii	29.23	3.00e-18	85.90
IUUC-Sit-110083	Setaria italica	26.91	5.00e-16	78.60
IUUC-Sly-111645	Solanum lycopersicum	26.00	2.00e-16	80.10
IUUC-Stu-112422	Solanum tuberosum	26.00	1.00e-16	80.90
IUUC-Sbi-113987	Sorghum bicolor	28.73	2.00e-16	80.10
IUUC-Sre-115095	Sporisorium reilianum	33.78	2.00e-81	296.00
IUUC-Ssc-116141	Sus scrofa	91.67	0.00e+00	1055.00
IUUC-Tgu-117492	Taeniopygia guttata	97.77	0.00e+00	926.00
IUUC-Tru-118463	Takifugu rubripes	79.23	0.00e+00	1001.00
IUUC-Tsy-118993	Tarsius syrichta	83.57	0.00e+00	954.00
IUUC-Tni-119896	Tetraodon nigroviridis	81.48	0.00e+00	1003.00
IUUC-Tca-121169	Theobroma cacao	28.12	9.00e-20	90.90
IUUC-Tre-122046	Trichoderma reesei	34.32	4.00e-93	335.00
IUUC-Tvi-122415	Trichoderma virens	34.72	3.00e-95	342.00
IUUC-Tae-123514	Triticum aestivum	26.30	2.00e-14	73.20
IUUC-Tme-127123	Tuber melanosporum	36.31	5.00e-103	368.00
IUUC-Tbe-127629	Tupaia belangeri	84.87	2.00e-145	508.00
IUUC-Ttr-128476	Tursiops truncatus	81.19	0.00e+00	917.00
IUUC-Uma-129492	Ustilago maydis	33.50	6.00e-81	295.00
IUUC-Vda-129702	Verticillium dahliae	37.39	4.00e-91	328.00
IUUC-Vvi-131090	Vitis vinifera	26.98	3.00e-13	69.30
IUUC-Xtr-131786	Xenopus tropicalis	86.62	0.00e+00	1090.00
IUUC-Xma-133997	Xiphophorus maculatus	79.75	0.00e+00	1016.00
IUUC-Yli-134537	Yarrowia lipolytica	35.40	3.00e-89	322.00
IUUC-Zma-134847	Zea mays	29.51	1.00e-17	84.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence