iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006151

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348718

Gene Name

ATL43; ARALYDRAFT_908496

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_600553.1	scaffold_600553.1	scaffold_600553.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-07	31.5	92	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   + +++lp C+H+fh +C+  w         + +CPlCr
   Q: 92   CAVCLARFepAEVLRLLPkCKHAFHVECVDTW------LDAHSTCPLCR 134
           ********6655588888**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPGIAVVIAV LTAFFSITFL LLLYVKHCKR RSGTVYVNHP QRFAISRYGG GYYNGGGVGG 60
GRKNSGIDRS VIESLPVFRF GALSGHKDGL ECAVCLARFE PAEVLRLLPK CKHAFHVECV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATACCTTCAC TTCCTCTTTC ATGCCGGGAA TCGCCGTCGT TATCGCCGTA CTCACCGCGT 60
TTTTCTCTAT CACTTTCTTA CTTCTCCTCT ACGTCAAACA CTGTAAACGA CGAAGCGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_908496

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003122	Amborella trichopoda	44.31	6.00e-57	214.00
IUUC-Ath-007131	Arabidopsis thaliana	95.18	1.00e-168	584.00
IUUC-Bdi-014982	Brachypodium distachyon	65.19	2.00e-45	175.00
IUUC-Bol-015760	Brassica oleracea	81.23	4.00e-129	453.00
IUUC-Bra-017357	Brassica rapa	77.87	2.00e-125	441.00
IUUC-Gma-042757	Glycine max	48.46	1.00e-58	219.00
IUUC-Hvu-047245	Hordeum vulgare	42.13	1.00e-51	196.00
IUUC-Lpe-051226	Leersia perrieri	62.22	3.00e-45	175.00
IUUC-Mtr-057973	Medicago truncatula	46.69	7.00e-59	220.00
IUUC-Mac-065494	Musa acuminata	41.87	3.00e-53	201.00
IUUC-Oba-075267	Oryza barthii	65.93	1.00e-45	176.00
IUUC-Ogl-077528	Oryza glaberrima	65.93	1.00e-45	176.00
IUUC-Ogu-078754	Oryza glumaepatula	65.93	1.00e-45	176.00
IUUC-Oin-079781	Oryza indica	65.93	1.00e-45	176.00
IUUC-Ome-081863	Oryza meridionalis	65.93	1.00e-45	176.00
IUUC-Oni-082943	Oryza nivara	65.93	1.00e-45	176.00
IUUC-Opu-083466	Oryza punctata	65.19	2.00e-45	176.00
IUUC-Oru-084675	Oryza rufipogon	65.93	1.00e-45	176.00
IUUC-Osa-085804	Oryza sativa	65.93	1.00e-45	176.00
IUUC-Ppa-095281	Physcomitrella patens	50.68	4.00e-32	132.00
IUUC-Pop-099148	Populus trichocarpa	46.23	3.00e-78	284.00
IUUC-Ppe-102095	Prunus persica	45.59	1.00e-68	252.00
IUUC-Smo-109603	Selaginella moellendorffii	77.36	3.00e-23	98.60
IUUC-Sit-109970	Setaria italica	44.09	9.00e-55	206.00
IUUC-Sly-111677	Solanum lycopersicum	44.57	2.00e-62	232.00
IUUC-Stu-112327	Solanum tuberosum	62.58	1.00e-50	192.00
IUUC-Sbi-114529	Sorghum bicolor	43.22	2.00e-55	209.00
IUUC-Tae-124580	Triticum aestivum	63.70	3.00e-44	172.00
IUUC-Vvi-131553	Vitis vinifera	51.83	1.00e-85	309.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence