iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058584

Ensembl Protein ID

KEH24054

UniProt Accession

A0A072U2Y7; A0A072U2Y7_MEDTR

Genbank Protein ID

KEH24054.1

Protein Name

CHY and CTCHY and RING-type zinc finger protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g102990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g102990	KEH24054	KEH24054
MTR_7g102990	KEH24055	KEH24055

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.6	160	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++C+e +    kd   vlpCgH++h+ C+  +     ++  + +CP+C
   Q: 160  CPVCFEFLfdttKD-ITVLPCGHTIHLGCVREM-----QQHLQYSCPVC 202
           ******99555444.668***********9666.....588999***** PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MEPHNNHHVD DVSPSEIGYG HFGCSHYKRR CKIISPCCNE IFDCRHCHNE SKNSIQVDPQ 60
HRHDIPRHHV KRVICSLCST EQDVQQVCIQ CGVCMGRYFC SKCKFFDDDV SKNQYHCDEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATATAAAAT CTTCTCACCC ATATTATCAA GACCAAAATA AATGGAACCT CATAATAACC 60
ACCACGTTGA TGATGTCTCT CCTTCGGAAA TCGGATATGG ACATTTCGGG TATTTCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004039--Rubredoxin-type_fold
IPR027370--Znf-RING_LisH
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_7g102990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006141	Arabidopsis lyrata	67.65	4.00e-115	406.00
IUUC-Ath-007628	Arabidopsis thaliana	69.12	9.00e-118	415.00
IUUC-Bdi-014852	Brachypodium distachyon	70.97	4.00e-111	393.00
IUUC-Bol-016321	Brassica oleracea	67.40	6.00e-116	409.00
IUUC-Bra-018009	Brassica rapa	68.13	4.00e-116	410.00
IUUC-Cre-022565	Chlamydomonas reinhardtii	53.78	1.00e-77	281.00
IUUC-Csv-025807	Ciona savignyi	47.60	7.00e-64	236.00
IUUC-Gma-044313	Glycine max	71.12	2.00e-116	411.00
IUUC-Hvu-047256	Hordeum vulgare	67.06	3.00e-108	383.00
IUUC-Lpe-051493	Leersia perrieri	65.75	7.00e-107	379.00
IUUC-Ogl-077866	Oryza glaberrima	67.89	3.00e-105	373.00
IUUC-Oin-079627	Oryza indica	60.78	1.00e-105	375.00
IUUC-Olo-080982	Oryza longistaminata	67.12	3.00e-92	330.00
IUUC-Oru-085088	Oryza rufipogon	60.78	1.00e-105	375.00
IUUC-Ppa-095916	Physcomitrella patens	61.36	2.00e-101	361.00
IUUC-Pop-099491	Populus trichocarpa	76.21	2.00e-125	440.00
IUUC-Ppe-101606	Prunus persica	77.78	6.00e-131	459.00
IUUC-Smo-108873	Selaginella moellendorffii	67.21	8.00e-105	372.00
IUUC-Stu-111990	Solanum tuberosum	76.63	3.00e-124	436.00
IUUC-Sbi-113777	Sorghum bicolor	65.10	3.00e-106	377.00
IUUC-Tca-121776	Theobroma cacao	77.78	6.00e-126	442.00
IUUC-Tae-124038	Triticum aestivum	65.64	3.00e-107	380.00
IUUC-Vvi-131666	Vitis vinifera	76.64	2.00e-127	447.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence