iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113910

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G039600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g003650	Sb01g003650.1	Sb01g003650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-08	35.6	161	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++ +p+++ lM d ++l++G++y  s ++  + + +  c +++ p+te ++ Pnl+lr  +qa+  e++s
   Q: 161  HLSDPLTGILMDDAMILSCGHSYGSSGMQH-VYRMK-ACGKCGLPITEASIRPNLALRLAVQAFKREEDS 228
           689*************************65.55555.5**************************988775 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASPAGANSG ASSSRGTPLP LPFPFPAAAH FPSRGAGPFL SQHHHPPVTS EGDDEVEEDE 60
GSMDDDSAEE DDAELSDGGA RGSPQRRAFS APGIGRTEMN GEIAVRSIQE GQQWHQFGLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAGCGCAC TTGAGACAAG CGTGAAGGCC CGCCGAGTCC AGCAAACAGC ACCGTCTCAA 60
TCCCCACCTC TTCCCGGCTC CGGCGGCCGC GCCACCATGG CTTCTCCTGC GGGGGCTAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_01g003650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000192	Aegilops tauschii	68.25	9.00e-104	369.00
IUUC-Atr-002682	Amborella trichopoda	59.33	3.00e-59	221.00
IUUC-Aly-005602	Arabidopsis lyrata	59.67	1.00e-54	206.00
IUUC-Ath-006823	Arabidopsis thaliana	54.76	1.00e-55	209.00
IUUC-Bdi-014337	Brachypodium distachyon	65.65	8.00e-115	405.00
IUUC-Bol-015470	Brassica oleracea	54.15	9.00e-54	202.00
IUUC-Bra-017015	Brassica rapa	55.98	4.00e-57	214.00
IUUC-Gma-042808	Glycine max	63.83	4.00e-63	234.00
IUUC-Hvu-047241	Hordeum vulgare	87.14	1.00e-34	136.00
IUUC-Mtr-058650	Medicago truncatula	53.14	1.00e-62	232.00
IUUC-Mac-065387	Musa acuminata	65.44	9.00e-80	289.00
IUUC-Oba-075942	Oryza barthii	75.00	1.00e-111	395.00
IUUC-Obr-076573	Oryza brachyantha	77.22	7.00e-116	409.00
IUUC-Ogl-077795	Oryza glaberrima	71.79	1.00e-108	385.00
IUUC-Ogu-078142	Oryza glumaepatula	75.37	3.00e-112	397.00
IUUC-Ome-081788	Oryza meridionalis	64.18	1.00e-89	323.00
IUUC-Oni-082512	Oryza nivara	76.74	1.00e-109	389.00
IUUC-Opu-083147	Oryza punctata	70.09	2.00e-113	400.00
IUUC-Oru-085135	Oryza rufipogon	76.74	1.00e-109	389.00
IUUC-Ppa-095972	Physcomitrella patens	51.78	1.00e-49	190.00
IUUC-Pop-099896	Populus trichocarpa	62.74	1.00e-66	246.00
IUUC-Ppe-101532	Prunus persica	62.87	1.00e-65	243.00
IUUC-Smo-109655	Selaginella moellendorffii	52.02	1.00e-44	172.00
IUUC-Sly-111788	Solanum lycopersicum	62.69	4.00e-64	237.00
IUUC-Stu-112107	Solanum tuberosum	54.03	1.00e-65	243.00
IUUC-Tca-121309	Theobroma cacao	59.81	4.00e-65	241.00
IUUC-Tae-125313	Triticum aestivum	74.81	9.00e-112	395.00
IUUC-Vvi-131465	Vitis vinifera	52.61	4.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence