iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114739

Ensembl Protein ID

Sb01g000780.1

UniProt Accession

C5WS04; C5WS04_SORBI

Genbank Protein ID

EER93077.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G007800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g000780	Sb01g000780.1	Sb01g000780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-25	86.7	334	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
           +v+c+++  d t+lvsGsdD ++++W 
   Q: 334  RVFCVKYtYDgTYLVSGSDDTNLRLWK 360
           69*****9556***************8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRVKVISRST DDYTRERSQD LQKVFRNYDP ALRSQEKAVE YTRALNAAKL EKIFAKPFIG 60
AMDGHIDAVS CMAKNPNHLK AIFSGSMDGD VRLWDIAARK TVCQFPGHQG AVRGLTTSTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTGATTTT CCCCGGCGGC GGCGGCGGCG TTGGGCGCTG GGTTGGGAGA GGAAGGCGGT 60
GCGCGGCGCA AAACCCCAGC TCCTCTTCGT CGTCAAGTGC TCTCCGGCCT CGCCGACCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

sbi:SORBI_01g000780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	47.79	6.00e-127	446.00
IUUC-Apl-003675	Anas platyrhynchos	48.65	2.00e-123	434.00
IUUC-Aca-004792	Anolis carolinensis	49.56	2.00e-134	471.00
IUUC-Ago-007774	Ashbya gossypii	45.69	3.00e-118	417.00
IUUC-Acl-008024	Aspergillus clavatus	44.30	3.00e-108	384.00
IUUC-Afu-008930	Aspergillus fumigatus	42.25	8.00e-103	366.00
IUUC-Ani-009370	Aspergillus nidulans	44.59	2.00e-107	382.00
IUUC-Ang-009827	Aspergillus niger	44.59	3.00e-107	380.00
IUUC-Aor-010060	Aspergillus oryzae	44.42	8.00e-101	359.00
IUUC-Ate-010434	Aspergillus terreus	45.38	8.00e-90	322.00
IUUC-Ame-011967	Astyanax mexicanus	44.57	5.00e-120	423.00
IUUC-Bgr-011989	Blumeria graminis	41.81	3.00e-102	364.00
IUUC-Bta-013291	Bos taurus	35.62	2.00e-80	291.00
IUUC-Bci-013868	Botrytis cinerea	41.85	5.00e-102	363.00
IUUC-Cel-018536	Caenorhabditis elegans	39.76	3.00e-95	340.00
IUUC-Cja-018779	Callithrix jacchus	48.89	2.00e-132	464.00
IUUC-Cfa-020105	Canis familiaris	48.67	5.00e-132	463.00
IUUC-Cpo-021538	Cavia porcellus	48.89	1.00e-126	445.00
IUUC-Csa-023492	Chlorocebus sabaeus	48.45	1.00e-131	462.00
IUUC-Cho-024497	Choloepus hoffmanni	41.54	1.00e-72	266.00
IUUC-Cin-025524	Ciona intestinalis	48.44	3.00e-130	457.00
IUUC-Csv-026197	Ciona savignyi	48.67	3.00e-130	457.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	42.89	3.00e-96	344.00
IUUC-Cme-027111	Cyanidioschyzon merolae	34.17	2.00e-73	268.00
IUUC-Dre-027471	Danio rerio	47.61	4.00e-124	437.00
IUUC-Dno-029790	Dasypus novemcinctus	48.32	2.00e-101	361.00
IUUC-Dor-030971	Dipodomys ordii	39.60	2.00e-94	338.00
IUUC-Dse-031563	Dothistroma septosporum	42.95	1.00e-101	362.00
IUUC-Dme-032161	Drosophila melanogaster	44.12	1.00e-116	412.00
IUUC-Ete-033127	Echinops telfairi	46.92	1.00e-122	432.00
IUUC-Eca-033531	Equus caballus	48.26	1.00e-122	432.00
IUUC-Eeu-034663	Erinaceus europaeus	44.27	1.00e-109	389.00
IUUC-Fca-036258	Felis catus	48.45	4.00e-131	460.00
IUUC-Fal-037456	Ficedula albicollis	49.56	2.00e-126	444.00
IUUC-Fox-038025	Fusarium oxysporum	42.24	4.00e-95	340.00
IUUC-Fso-038344	Fusarium solani	42.34	5.00e-90	323.00
IUUC-Gmo-039643	Gadus morhua	47.12	2.00e-124	438.00
IUUC-Gga-040143	Gallus gallus	50.44	2.00e-130	458.00
IUUC-Gac-041665	Gasterosteus aculeatus	48.97	3.00e-130	457.00
IUUC-Ggo-045058	Gorilla gorilla	48.67	4.00e-132	464.00
IUUC-Hsa-046843	Homo sapiens	48.67	5.00e-131	460.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	48.45	1.00e-131	461.00
IUUC-Kpa-049232	Komagataella pastoris	43.11	4.00e-117	414.00
IUUC-Lch-050542	Latimeria chalumnae	45.89	7.00e-131	459.00
IUUC-Loc-052674	Lepisosteus oculatus	49.02	5.00e-137	479.00
IUUC-Lma-053108	Leptosphaeria maculans	41.72	2.00e-101	362.00
IUUC-Laf-053385	Loxodonta africana	48.01	4.00e-128	450.00
IUUC-Mcc-055151	Macaca mulatta	48.45	1.00e-131	461.00
IUUC-Meu-056230	Macropus eugenii	45.37	7.00e-55	206.00
IUUC-Mor-057013	Magnaporthe oryzae	41.42	4.00e-92	330.00
IUUC-Mla-058964	Melampsora laricipopulina	38.23	4.00e-89	320.00
IUUC-Mga-059712	Meleagris gallopavo	49.31	1.00e-121	429.00
IUUC-Mmr-061340	Microcebus murinus	46.37	5.00e-122	430.00
IUUC-Mdo-062978	Monodelphis domestica	50.00	1.00e-134	471.00
IUUC-Mmu-063439	Mus musculus	48.68	3.00e-132	464.00
IUUC-Mpu-066548	Mustela putorius furo	43.41	5.00e-95	340.00
IUUC-Mlu-067660	Myotis lucifugus	47.79	2.00e-130	457.00
IUUC-Nfi-068455	Neosartorya fischeri	43.58	6.00e-106	376.00
IUUC-Ncr-068848	Neurospora crassa	42.45	4.00e-99	354.00
IUUC-Nle-069923	Nomascus leucogenys	48.45	5.00e-131	460.00
IUUC-Opr-070279	Ochotona princeps	38.10	2.00e-34	139.00
IUUC-Ont-072234	Oreochromis niloticus	48.88	1.00e-132	465.00
IUUC-Oan-073713	Ornithorhynchus anatinus	42.00	2.00e-44	171.00
IUUC-Ocu-073782	Oryctolagus cuniculus	48.89	5.00e-132	463.00
IUUC-Ola-086836	Oryzias latipes	48.23	2.00e-131	461.00
IUUC-Olu-087755	Ostreococcus lucimarinus	53.78	7.00e-144	503.00
IUUC-Oga-088170	Otolemur garnettii	48.67	4.00e-132	463.00
IUUC-Oar-089388	Ovis aries	48.67	6.00e-131	459.00
IUUC-Ptr-090494	Pan troglodytes	48.67	2.00e-131	462.00
IUUC-Pan-091697	Papio anubis	48.45	2.00e-131	461.00
IUUC-Psi-093916	Pelodiscus sinensis	48.01	1.00e-124	438.00
IUUC-Pno-095004	Phaeosphaeria nodorum	40.40	6.00e-95	340.00
IUUC-Pfo-097432	Poecilia formosa	49.89	1.00e-129	455.00
IUUC-Pab-098423	Pongo abelii	48.23	8.00e-132	462.00
IUUC-Pca-100365	Procavia capensis	46.68	1.00e-121	429.00
IUUC-Ppe-101350	Prunus persica	71.05	0.00e+00	692.00
IUUC-Pva-102845	Pteropus vampyrus	48.45	6.00e-129	453.00
IUUC-Pte-104111	Pyrenophora teres	41.94	2.00e-96	344.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	41.94	9.00e-97	346.00
IUUC-Rno-105082	Rattus norvegicus	48.67	2.00e-132	464.00
IUUC-Sce-106340	Saccharomyces cerevisiae	43.04	5.00e-112	397.00
IUUC-Sha-106584	Sarcophilus harrisii	49.78	4.00e-135	473.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	41.85	2.00e-101	361.00
IUUC-Sly-111762	Solanum lycopersicum	73.23	0.00e+00	709.00
IUUC-Stu-112156	Solanum tuberosum	73.23	0.00e+00	709.00
IUUC-Ssc-115510	Sus scrofa	48.45	5.00e-130	456.00
IUUC-Tgu-117234	Taeniopygia guttata	48.72	1.00e-116	412.00
IUUC-Tru-117986	Takifugu rubripes	47.59	8.00e-128	449.00
IUUC-Tsy-119252	Tarsius syrichta	48.51	1.00e-120	426.00
IUUC-Tni-119785	Tetraodon nigroviridis	48.83	5.00e-124	437.00
IUUC-Tre-122243	Trichoderma reesei	43.02	3.00e-98	351.00
IUUC-Tvi-122293	Trichoderma virens	43.48	3.00e-99	354.00
IUUC-Tme-127200	Tuber melanosporum	49.78	9.00e-125	439.00
IUUC-Tbe-127568	Tupaia belangeri	45.13	3.00e-55	208.00
IUUC-Ttr-129185	Tursiops truncatus	42.92	6.00e-106	377.00
IUUC-Vda-129768	Verticillium dahliae	40.48	5.00e-92	330.00
IUUC-Vpa-130572	Vicugna pacos	48.45	2.00e-129	455.00
IUUC-Xtr-132263	Xenopus tropicalis	47.98	8.00e-105	372.00
IUUC-Xma-133925	Xiphophorus maculatus	49.66	3.00e-128	451.00
IUUC-Zma-135616	Zea mays	97.79	0.00e+00	895.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence