iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047853

Ensembl Protein ID

MLOC_60624.1

UniProt Accession

F2CRW5; F2CRW5_HORVV

Genbank Protein ID

BAJ85586.1; BAJ96442.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

AK354367; AK365239

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_60624	MLOC_60624.2	MLOC_60624.2
MLOC_60624	MLOC_60624.1	MLOC_60624.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.60e-17	62.8	122	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrtlt........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
            vkvs++g+++++++dl+ + ++++L++a++++         +++ s++a++YeD+dGDl+ l++D+++++++s       ++rl+i+k
   Q: 122  YVKVSMDGAPYLRKIDLKMYKGYRELREALEAMFlgfsgdagSVNPSDFAVTYEDKDGDLM-LVGDVPFEMFMS------TCKRLRIMK 203
           69******************************44567788989999***************.************......9******98 PP

Organism

Hordeum vulgare

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAAAAMSYVH ADVENLKATE LRLGLPGVEE TAKVPSPPST PRAGSKRALA GEHREEEPKT 60
APPAAKAQVV GWPPVRSYRK SCFQQASSKT KPAAPAPVAV KQEEAAVTAA PPAAAAAGGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACGTACGT GTGCATGTGG ACGCATGTGG AGTTGAGCCT CCCTCACACG GGCGCGCCAC 60
ACGCCCGCCC GCCTATCCCG CCTCGTCGCA GCAGGCCAAG CCTCTATAAA ACATTTACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	57.48	3.00e-52	196.00
IUUC-Atr-002618	Amborella trichopoda	48.39	3.00e-45	172.00
IUUC-Aly-006269	Arabidopsis lyrata	49.77	2.00e-46	177.00
IUUC-Ath-007370	Arabidopsis thaliana	49.03	7.00e-48	182.00
IUUC-Bdi-014020	Brachypodium distachyon	68.57	8.00e-64	234.00
IUUC-Bol-015312	Brassica oleracea	49.51	3.00e-44	169.00
IUUC-Bra-016684	Brassica rapa	49.28	1.00e-45	174.00
IUUC-Gma-043277	Glycine max	47.42	1.00e-46	177.00
IUUC-Lpe-051475	Leersia perrieri	58.74	1.00e-53	201.00
IUUC-Mtr-058771	Medicago truncatula	47.77	2.00e-46	177.00
IUUC-Mac-065389	Musa acuminata	52.36	2.00e-50	190.00
IUUC-Oba-075141	Oryza barthii	70.24	1.00e-67	247.00
IUUC-Obr-076144	Oryza brachyantha	63.94	4.00e-58	216.00
IUUC-Ogl-077720	Oryza glaberrima	59.63	1.00e-57	214.00
IUUC-Ogu-078093	Oryza glumaepatula	69.76	1.00e-68	250.00
IUUC-Oin-079780	Oryza indica	69.27	4.00e-65	239.00
IUUC-Oni-083078	Oryza nivara	69.27	4.00e-65	239.00
IUUC-Opu-083449	Oryza punctata	59.31	1.00e-49	188.00
IUUC-Oru-084991	Oryza rufipogon	69.27	4.00e-65	239.00
IUUC-Osa-085321	Oryza sativa	69.27	4.00e-65	239.00
IUUC-Pop-099361	Populus trichocarpa	51.16	9.00e-47	178.00
IUUC-Ppe-101287	Prunus persica	50.23	3.00e-44	169.00
IUUC-Sit-109841	Setaria italica	68.20	3.00e-71	259.00
IUUC-Sly-110939	Solanum lycopersicum	50.48	8.00e-48	181.00
IUUC-Stu-112670	Solanum tuberosum	50.72	1.00e-46	177.00
IUUC-Sbi-114296	Sorghum bicolor	59.75	1.00e-58	218.00
IUUC-Tca-121147	Theobroma cacao	50.72	3.00e-48	182.00
IUUC-Tae-123807	Triticum aestivum	94.42	6.00e-95	338.00
IUUC-Vvi-131595	Vitis vinifera	52.29	1.00e-48	184.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence