iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099415

Ensembl Protein ID

POPTR_0003s17260.1

UniProt Accession

B9GZZ6; B9GZZ6_POPTR

Genbank Protein ID

EEE79670.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_712459; POPTR_0003s17260g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s17260	POPTR_0003s17260.1	POPTR_0003s17260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.70e-08	34.2	191	237

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C + + ++  ++ C++  C+ ewfH++C++l+  e+++++  w+C++C 
   Q: 191  TYC-FCNQVSYGD--MIACDNpdCKiEWFHFGCVGLK--EKVKGK--WYCSDCA 237
           69*.********9..**********************..778777..******6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSFVDEFQA NLEALPNILQ KKYSLLRDLD KSLQEIQRQN EQRCEQEIED IKRGVKAGNI 60
TPNTSLIRFS DEALDEQKHS IRIADEKMAL AVQAYDLVDA HIQQLDQFLK LCDEDNRRER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTGTATT TAAAATCCAG GGTTTAAAGG CGGGATCCTT GAAAAATCAA AATCCCAGAT 60
ACAAACCCTA AAATGTCCTC CTTCGTCGAT GAATTTCAAG CCAGTAATCC CTTTCTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

pop:POPTR_0003s17260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001338	Ailuropoda melanoleuca	31.97	9.00e-32	129.00
IUUC-Atr-002906	Amborella trichopoda	54.29	7.00e-71	259.00
IUUC-Apl-004097	Anas platyrhynchos	34.44	1.00e-32	132.00
IUUC-Aca-004593	Anolis carolinensis	33.33	3.00e-33	134.00
IUUC-Aly-005815	Arabidopsis lyrata	55.33	4.00e-62	230.00
IUUC-Ath-006765	Arabidopsis thaliana	61.07	1.00e-69	255.00
IUUC-Acl-008091	Aspergillus clavatus	61.11	5.00e-18	85.90
IUUC-Ate-010297	Aspergillus terreus	59.26	1.00e-17	84.30
IUUC-Ame-011133	Astyanax mexicanus	34.25	4.00e-34	137.00
IUUC-Bta-012699	Bos taurus	32.79	9.00e-33	132.00
IUUC-Bdi-014504	Brachypodium distachyon	52.05	5.00e-70	256.00
IUUC-Bol-015245	Brassica oleracea	61.89	5.00e-70	256.00
IUUC-Bra-017027	Brassica rapa	62.30	4.00e-69	253.00
IUUC-Cja-019988	Callithrix jacchus	30.49	2.00e-30	125.00
IUUC-Cfa-021282	Canis familiaris	31.30	1.00e-31	129.00
IUUC-Cpo-022011	Cavia porcellus	31.71	4.00e-33	134.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	36.48	3.00e-23	101.00
IUUC-Csa-023203	Chlorocebus sabaeus	30.49	2.00e-30	125.00
IUUC-Cho-025039	Choloepus hoffmanni	64.18	4.00e-26	111.00
IUUC-Cin-025479	Ciona intestinalis	34.47	3.00e-33	134.00
IUUC-Cne-027005	Cryptococcus neoformans	48.98	7.00e-12	64.30
IUUC-Cme-027118	Cyanidioschyzon merolae	44.44	1.00e-04	41.20
IUUC-Dre-027430	Danio rerio	33.75	2.00e-34	138.00
IUUC-Dno-029766	Dasypus novemcinctus	31.93	3.00e-30	124.00
IUUC-Dor-030910	Dipodomys ordii	67.19	5.00e-26	110.00
IUUC-Dme-032200	Drosophila melanogaster	59.74	6.00e-27	114.00
IUUC-Ete-032510	Echinops telfairi	52.22	8.00e-26	110.00
IUUC-Eca-033565	Equus caballus	31.85	1.00e-32	132.00
IUUC-Eeu-034948	Erinaceus europaeus	31.43	7.00e-31	126.00
IUUC-Fca-036368	Felis catus	30.89	5.00e-31	127.00
IUUC-Fal-037120	Ficedula albicollis	34.44	2.00e-32	131.00
IUUC-Fox-037925	Fusarium oxysporum	60.00	7.00e-16	77.80
IUUC-Gga-040771	Gallus gallus	33.33	3.00e-33	134.00
IUUC-Gac-042184	Gasterosteus aculeatus	32.84	4.00e-34	137.00
IUUC-Gma-044339	Glycine max	70.08	7.00e-87	312.00
IUUC-Ggo-045559	Gorilla gorilla	30.49	2.00e-30	125.00
IUUC-Hsa-046852	Homo sapiens	30.49	2.00e-30	125.00
IUUC-Hvu-047046	Hordeum vulgare	63.89	7.00e-37	146.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	32.26	6.00e-33	133.00
IUUC-Kpa-049229	Komagataella pastoris	51.02	7.00e-14	70.10
IUUC-Lch-049419	Latimeria chalumnae	61.43	5.00e-26	111.00
IUUC-Lpe-050822	Leersia perrieri	53.47	3.00e-69	254.00
IUUC-Loc-052038	Lepisosteus oculatus	76.36	5.00e-26	110.00
IUUC-Laf-054057	Loxodonta africana	30.89	5.00e-31	127.00
IUUC-Mcc-055212	Macaca mulatta	31.87	4.00e-30	124.00
IUUC-Meu-056848	Macropus eugenii	64.18	2.00e-25	109.00
IUUC-Mtr-058089	Medicago truncatula	68.70	4.00e-81	293.00
IUUC-Mga-059967	Meleagris gallopavo	34.30	1.00e-32	132.00
IUUC-Mmr-060843	Microcebus murinus	33.20	6.00e-32	130.00
IUUC-Mdo-062357	Monodelphis domestica	31.71	6.00e-33	133.00
IUUC-Mmu-064093	Mus musculus	31.71	4.00e-33	134.00
IUUC-Mac-064625	Musa acuminata	60.25	5.00e-77	279.00
IUUC-Mpu-066530	Mustela putorius furo	55.42	6.00e-26	111.00
IUUC-Mlu-067754	Myotis lucifugus	31.60	5.00e-31	127.00
IUUC-Nle-069062	Nomascus leucogenys	30.49	2.00e-30	125.00
IUUC-Opr-070207	Ochotona princeps	33.47	6.00e-31	126.00
IUUC-Ont-072446	Oreochromis niloticus	32.46	1.00e-33	135.00
IUUC-Oan-073652	Ornithorhynchus anatinus	33.47	3.00e-32	130.00
IUUC-Ocu-074235	Oryctolagus cuniculus	30.49	2.00e-30	125.00
IUUC-Obr-076266	Oryza brachyantha	52.65	7.00e-69	253.00
IUUC-Ogl-077118	Oryza glaberrima	50.00	3.00e-67	247.00
IUUC-Oin-079049	Oryza indica	50.20	4.00e-67	247.00
IUUC-Ome-081291	Oryza meridionalis	50.59	2.00e-67	248.00
IUUC-Oni-082218	Oryza nivara	49.80	4.00e-67	247.00
IUUC-Opu-084171	Oryza punctata	50.41	3.00e-66	244.00
IUUC-Osa-085563	Oryza sativa	50.59	2.00e-67	248.00
IUUC-Ola-086429	Oryzias latipes	31.52	4.00e-29	120.00
IUUC-Oga-089123	Otolemur garnettii	30.89	5.00e-31	127.00
IUUC-Oar-089524	Ovis aries	32.79	9.00e-33	132.00
IUUC-Ptr-090908	Pan troglodytes	31.05	1.00e-30	125.00
IUUC-Pan-092837	Papio anubis	31.97	9.00e-32	129.00
IUUC-Psi-093828	Pelodiscus sinensis	34.45	6.00e-32	130.00
IUUC-Pma-094144	Petromyzon marinus	65.67	4.00e-25	106.00
IUUC-Pab-098253	Pongo abelii	76.36	1.00e-25	109.00
IUUC-Pca-100600	Procavia capensis	67.19	3.00e-26	111.00
IUUC-Ppe-101441	Prunus persica	72.54	4.00e-89	320.00
IUUC-Pva-102325	Pteropus vampyrus	31.85	1.00e-32	132.00
IUUC-Pte-104284	Pyrenophora teres	51.79	1.00e-15	78.20
IUUC-Rno-105178	Rattus norvegicus	34.02	8.00e-34	136.00
IUUC-Sha-106773	Sarcophilus harrisii	31.71	6.00e-33	134.00
IUUC-Smo-109441	Selaginella moellendorffii	40.16	1.00e-47	181.00
IUUC-Sit-109827	Setaria italica	51.64	5.00e-68	249.00
IUUC-Sly-111750	Solanum lycopersicum	65.57	9.00e-83	298.00
IUUC-Stu-112250	Solanum tuberosum	65.57	9.00e-83	298.00
IUUC-Sar-113193	Sorex araneus	64.18	8.00e-26	110.00
IUUC-Sbi-114826	Sorghum bicolor	52.05	4.00e-69	253.00
IUUC-Sre-115124	Sporisorium reilianum	57.89	4.00e-21	96.30
IUUC-Ssc-115797	Sus scrofa	32.62	1.00e-31	129.00
IUUC-Tgu-117270	Taeniopygia guttata	33.33	3.00e-33	134.00
IUUC-Tru-118253	Takifugu rubripes	32.43	5.00e-34	137.00
IUUC-Tsy-119035	Tarsius syrichta	54.02	1.00e-25	110.00
IUUC-Tni-119775	Tetraodon nigroviridis	33.20	5.00e-28	117.00
IUUC-Tca-121597	Theobroma cacao	77.24	4.00e-92	330.00
IUUC-Tvi-122341	Trichoderma virens	59.26	7.00e-14	69.30
IUUC-Tae-123043	Triticum aestivum	52.83	3.00e-68	251.00
IUUC-Tbe-127558	Tupaia belangeri	31.97	9.00e-32	129.00
IUUC-Ttr-128300	Tursiops truncatus	73.68	3.00e-26	111.00
IUUC-Uma-129581	Ustilago maydis	57.89	1.00e-21	97.80
IUUC-Vpa-130063	Vicugna pacos	67.86	1.00e-22	99.80
IUUC-Vvi-131487	Vitis vinifera	64.98	4.00e-84	303.00
IUUC-Xtr-132200	Xenopus tropicalis	66.15	3.00e-26	111.00
IUUC-Xma-133297	Xiphophorus maculatus	33.61	7.00e-32	130.00
IUUC-Yli-134326	Yarrowia lipolytica	53.70	8.00e-17	80.50
IUUC-Zma-135298	Zea mays	60.71	4.00e-38	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence