iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114358

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G111100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g012740	Sb05g012740.1	Sb05g012740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.40e-32	112.4	127	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe+++R+EnqWA
   Q: 127  KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWA 174
           89*********************************************9 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAEGEKKMI TLKSSDGEEF EVEEAVAMES QTIRHMIEDD CADNGIPLPN VNSKILSKVI 60
EYCNKHVHAA AAAAAASKAG SDDVGAAAAN STAASGEDLK NWDADFVKVD QATLFDLILA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAATCCC TAATCGACTT CCCCAATCTT TCGCCCTCTT CGCGCAGCAG CTACAGAGCT 60
AGGGTTCCGT CCTCGATCCG ATCCGGCGAG TGCTCACCAC CTTTCCCCAC TTCCCTCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_05g012740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002858	Amborella trichopoda	71.93	4.00e-54	202.00
IUUC-Aly-006066	Arabidopsis lyrata	76.92	1.00e-56	211.00
IUUC-Ath-006881	Arabidopsis thaliana	75.15	7.00e-57	211.00
IUUC-Bdi-014448	Brachypodium distachyon	89.14	1.00e-63	234.00
IUUC-Bol-015842	Brassica oleracea	73.68	4.00e-55	205.00
IUUC-Bra-016913	Brassica rapa	73.68	4.00e-55	205.00
IUUC-Gma-043086	Glycine max	76.92	3.00e-58	216.00
IUUC-Lpe-050940	Leersia perrieri	90.86	3.00e-61	226.00
IUUC-Mac-064537	Musa acuminata	79.29	3.00e-57	213.00
IUUC-Oba-075637	Oryza barthii	90.34	2.00e-63	233.00
IUUC-Obr-076526	Oryza brachyantha	89.77	1.00e-68	250.00
IUUC-Ogl-077492	Oryza glaberrima	90.34	2.00e-63	233.00
IUUC-Ogu-078927	Oryza glumaepatula	90.34	2.00e-63	233.00
IUUC-Oin-079204	Oryza indica	90.34	2.00e-63	233.00
IUUC-Olo-080526	Oryza longistaminata	83.68	2.00e-60	223.00
IUUC-Ome-081685	Oryza meridionalis	90.34	2.00e-63	233.00
IUUC-Oni-082053	Oryza nivara	90.34	2.00e-63	233.00
IUUC-Opu-083354	Oryza punctata	90.34	9.00e-67	244.00
IUUC-Oru-084246	Oryza rufipogon	90.34	2.00e-63	233.00
IUUC-Osa-086133	Oryza sativa	90.34	2.00e-63	233.00
IUUC-Pop-099897	Populus trichocarpa	75.00	3.00e-58	216.00
IUUC-Ppe-101503	Prunus persica	75.00	5.00e-58	215.00
IUUC-Sit-110769	Setaria italica	98.30	3.00e-67	246.00
IUUC-Tca-121022	Theobroma cacao	75.00	8.00e-60	221.00
IUUC-Tae-122779	Triticum aestivum	87.21	2.00e-62	230.00
IUUC-Vvi-130994	Vitis vinifera	76.92	1.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence