iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043879

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000839

Gene Name

GLYMA_06G116800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G12310	GLYMA06G12310.1	GLYMA06G12310.1
GLYMA06G12310	GLYMA06G12310.2	GLYMA06G12310.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.60e-07	30.8	6	50
E3 adaptor/Cullin RING/DCX/DWD	3.10e-17	63.6	667	700

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl++f++    p+vl+CgH  ++ Cl  +   ++  + ++rCP C
   Q: 6    CPVCLQSFDERdaiPRVLSCGHSVCEACLAEL---PQRYQDTIRCPAC 50
           ********666677***************555...444599******9 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgv 34
           gH + v+ la  d  l sGs+Dgt+++W+l ++ 
   Q: 667  GHRSVVSTLAVCDEVLYSGSWDGTVRLWSLNDHS 700
           8********996799**************98775 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEPPECPVCL QSFDERDAIP RVLSCGHSVC EACLAELPQR YQDTIRCPAC TQLVKYPSQQ 60
GPSSLPKNID LLRLSLQHSP SPSSSSSSDH SQIPNQRSTT NSCYYHPPFS SHELYVTWKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCGC CGGAGTGCCC GGTATGTCTT CAATCCTTCG ACGAGCGCGA CGCAATTCCT 60
CGTGTCTTAT CATGTGGACA CTCCGTCTGC GAAGCTTGCC TCGCGGAGCT TCCGCAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	32.87	2.00e-74	273.00
IUUC-Atr-003105	Amborella trichopoda	37.70	7.00e-140	491.00
IUUC-Aly-006480	Arabidopsis lyrata	39.35	2.00e-142	500.00
IUUC-Ath-007304	Arabidopsis thaliana	42.69	0.00e+00	629.00
IUUC-Bdi-015002	Brachypodium distachyon	36.23	8.00e-105	374.00
IUUC-Bol-015912	Brassica oleracea	43.03	1.00e-170	593.00
IUUC-Bra-017564	Brassica rapa	43.54	0.00e+00	636.00
IUUC-Hvu-047671	Hordeum vulgare	39.53	4.00e-118	418.00
IUUC-Lpe-051223	Leersia perrieri	37.87	1.00e-107	384.00
IUUC-Mtr-058731	Medicago truncatula	63.18	0.00e+00	655.00
IUUC-Mac-065113	Musa acuminata	41.64	7.00e-161	560.00
IUUC-Oba-075807	Oryza barthii	37.85	3.00e-115	409.00
IUUC-Obr-076101	Oryza brachyantha	36.78	3.00e-125	442.00
IUUC-Ogl-077321	Oryza glaberrima	34.59	1.00e-115	411.00
IUUC-Ogu-078456	Oryza glumaepatula	36.31	8.00e-115	408.00
IUUC-Oin-079822	Oryza indica	37.88	8.00e-116	411.00
IUUC-Olo-080336	Oryza longistaminata	40.99	4.00e-105	375.00
IUUC-Ome-081976	Oryza meridionalis	35.87	3.00e-118	419.00
IUUC-Oni-082359	Oryza nivara	37.90	3.00e-115	409.00
IUUC-Opu-083757	Oryza punctata	35.78	4.00e-122	432.00
IUUC-Oru-085207	Oryza rufipogon	37.73	3.00e-115	409.00
IUUC-Osa-085546	Oryza sativa	34.70	1.00e-66	247.00
IUUC-Ppa-095665	Physcomitrella patens	31.19	3.00e-85	310.00
IUUC-Pop-098862	Populus trichocarpa	49.64	0.00e+00	792.00
IUUC-Ppe-101295	Prunus persica	52.53	0.00e+00	787.00
IUUC-Smo-109481	Selaginella moellendorffii	30.79	3.00e-60	227.00
IUUC-Sit-110599	Setaria italica	37.73	4.00e-112	399.00
IUUC-Sly-111867	Solanum lycopersicum	51.71	8.00e-103	366.00
IUUC-Stu-112296	Solanum tuberosum	43.11	0.00e+00	649.00
IUUC-Sbi-114828	Sorghum bicolor	37.63	4.00e-119	422.00
IUUC-Tca-121601	Theobroma cacao	49.40	0.00e+00	737.00
IUUC-Tae-125537	Triticum aestivum	38.68	7.00e-129	454.00
IUUC-Tur-126303	Triticum urartu	41.55	2.00e-116	412.00
IUUC-Vvi-130947	Vitis vinifera	50.59	0.00e+00	811.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence