iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100039

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_177975; POPTR_0001s04620g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s04620	POPTR_0001s04620.1	POPTR_0001s04620.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	61.37	0.00e+00	994.00	IUUC-Ath-006615

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MESSESEEPE KKRTHLNSPL SPTMARNSST SPPDNKSVKI SLPFYISLWF FFFASIQVDV 60
TVLQCQNQKL VQQLDVQKHE FHGLEAKIKE LKDKQASYDG MLITVNKLWN QLVDDLVLLG 120

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Nucleotide Sequence
(Fasta)

GGGTTTGTGT TCTTGCAGTT TGTTTCTTCA CAAAAGAAAA AAATGGAATC ATACAGTAAT 60
TCTCAGGCTG CTTAAATATT CATATAGTAA TTTAGTAAAC GAAGAAACCC TTAAATGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0045087--P:innate immune response
GO:0009965--P:leaf morphogenesis
GO:0010162--P:seed dormancy process
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

pop:POPTR_0001s04620g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	51.26	1.00e-139	489.00
IUUC-Aly-006469	Arabidopsis lyrata	62.11	0.00e+00	956.00
IUUC-Ath-006615	Arabidopsis thaliana	61.37	0.00e+00	964.00
IUUC-Bdi-015006	Brachypodium distachyon	56.04	0.00e+00	814.00
IUUC-Bol-016588	Brassica oleracea	63.43	0.00e+00	939.00
IUUC-Bra-017335	Brassica rapa	62.53	0.00e+00	909.00
IUUC-Cme-027134	Cyanidioschyzon merolae	40.28	1.00e-15	77.80
IUUC-Ggr-040117	Gaeumannomyces graminis	41.51	2.00e-11	63.90
IUUC-Lma-053312	Leptosphaeria maculans	44.23	1.00e-12	68.20
IUUC-Mor-057068	Magnaporthe oryzae	45.00	9.00e-13	68.60
IUUC-Mpo-057568	Magnaporthe poae	41.51	3.00e-11	63.20
IUUC-Mtr-058247	Medicago truncatula	61.74	0.00e+00	932.00
IUUC-Olo-080612	Oryza longistaminata	54.52	0.00e+00	734.00
IUUC-Opu-083683	Oryza punctata	55.15	0.00e+00	765.00
IUUC-Osa-085839	Oryza sativa	55.09	0.00e+00	764.00
IUUC-Pno-095079	Phaeosphaeria nodorum	46.43	2.00e-13	70.90
IUUC-Ppa-095651	Physcomitrella patens	43.67	3.00e-170	592.00
IUUC-Pte-104415	Pyrenophora teres	41.27	3.00e-13	70.10
IUUC-Pyt-104762	Pyrenophora triticirepentis	41.27	3.00e-13	70.10
IUUC-Smo-109550	Selaginella moellendorffii	43.37	1.00e-168	586.00
IUUC-Sar-113755	Sorex araneus	30.46	4.00e-16	80.10
IUUC-Tae-123217	Triticum aestivum	56.64	0.00e+00	852.00
IUUC-Tur-126160	Triticum urartu	55.12	0.00e+00	748.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence