iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012056

Ensembl Protein ID

CCU81810

UniProt Accession

N1JMI2; N1JMI2_BLUG1

Genbank Protein ID

CCU81810.1

Protein Name

Nucleotide excision repair protein RAD23

Genbank Nucleotide ID

CAUH01005483

Gene Name

BGHDH14_bgh01814

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh01814	CCU81810	CCU81810

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-09	36.3	154	185
ULD/UDP/UBQ/UBQ_PIM	6.60e-20	69.3	1	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 10   lveMGFdreealqaLraannnleaAveyLldg 41
           l++MGF+r+++  a+raa+ n e+AveyLl+g
   Q: 154  LESMGFERSQIDAAMRAAFFNSERAVEYLLNG 185
           789***************9999********86 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkl ++ lk+++f +e++++d ++ lK+kia+e+g +++ qkLIy+GkiL+D+ t+++++i++  +++++  k+k
   Q: 1    MKLSFRDLKQNKFIIEAEPSDLISTLKAKIAEEKGWDASTQKLIYSGKILQDANTVESYNIEERGFIVCMTAKPK 75
           8999******************************************************************98876 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MKLSFRDLKQ NKFIIEAEPS DLISTLKAKI AEEKGWDAST QKLIYSGKIL QDANTVESYN 60
IEERGFIVCM TAKPKAVPSI PASTAKAPST PSSNNTLSTL AAPSQPTASG NENIQAATPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACATCTC CACCTCGACT ATAACGAAAC TCCCAAACCT TCACTGTTCC AGTTGACTCC 60
TACTGTTTCC ACAGAAATGA AGCTCTCTTT CAGAGTAAGT AACTAATCGA TAACTCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0003684--F:damaged DNA binding
GO:0042177--P:negative regulation of protein catabolic process
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.31	6.00e-26	110.00
IUUC-Aml-001515	Ailuropoda melanoleuca	32.92	3.00e-32	130.00
IUUC-Atr-002756	Amborella trichopoda	35.73	2.00e-40	157.00
IUUC-Apl-003371	Anas platyrhynchos	42.98	2.00e-17	81.30
IUUC-Aca-004704	Anolis carolinensis	40.00	6.00e-23	99.40
IUUC-Aly-006159	Arabidopsis lyrata	33.00	3.00e-36	144.00
IUUC-Ath-006676	Arabidopsis thaliana	46.15	1.00e-22	99.00
IUUC-Ago-007830	Ashbya gossypii	29.90	1.00e-21	95.50
IUUC-Acl-008212	Aspergillus clavatus	48.72	6.00e-75	272.00
IUUC-Afl-008605	Aspergillus flavus	53.52	7.00e-52	196.00
IUUC-Afu-008877	Aspergillus fumigatus	51.43	2.00e-78	283.00
IUUC-Ani-009460	Aspergillus nidulans	51.43	4.00e-72	263.00
IUUC-Aor-010032	Aspergillus oryzae	53.52	8.00e-52	195.00
IUUC-Ate-010458	Aspergillus terreus	52.16	1.00e-52	198.00
IUUC-Ame-011107	Astyanax mexicanus	46.24	1.00e-16	79.00
IUUC-Bta-012377	Bos taurus	34.33	1.00e-21	95.50
IUUC-Bci-013933	Botrytis cinerea	60.37	3.00e-93	333.00
IUUC-Bdi-014253	Brachypodium distachyon	39.60	3.00e-25	107.00
IUUC-Bol-016493	Brassica oleracea	34.60	2.00e-30	124.00
IUUC-Bra-017582	Brassica rapa	34.09	8.00e-30	122.00
IUUC-Cel-018364	Caenorhabditis elegans	29.47	1.00e-17	82.00
IUUC-Cja-018946	Callithrix jacchus	33.91	2.00e-28	118.00
IUUC-Cfa-020683	Canis familiaris	41.96	8.00e-17	79.30
IUUC-Cpo-021850	Cavia porcellus	35.71	3.00e-40	157.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	42.98	3.00e-15	74.30
IUUC-Csa-023183	Chlorocebus sabaeus	33.42	2.00e-35	140.00
IUUC-Cho-024814	Choloepus hoffmanni	42.86	5.00e-17	80.10
IUUC-Cin-025741	Ciona intestinalis	30.47	3.00e-16	77.00
IUUC-Csv-025823	Ciona savignyi	38.38	4.00e-22	96.30
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.56	3.00e-41	160.00
IUUC-Cne-027056	Cryptococcus neoformans	44.00	1.00e-15	75.50
IUUC-Cme-027260	Cyanidioschyzon merolae	30.68	6.00e-13	66.60
IUUC-Dre-028209	Danio rerio	31.51	4.00e-28	116.00
IUUC-Dno-030017	Dasypus novemcinctus	30.48	4.00e-18	83.60
IUUC-Dor-030358	Dipodomys ordii	37.50	6.00e-25	106.00
IUUC-Dse-031336	Dothistroma septosporum	76.86	5.00e-41	159.00
IUUC-Dme-032027	Drosophila melanogaster	35.51	2.00e-25	108.00
IUUC-Ete-032583	Echinops telfairi	41.96	2.00e-16	78.60
IUUC-Eca-033599	Equus caballus	35.91	8.00e-18	82.40
IUUC-Eeu-035240	Erinaceus europaeus	46.43	5.00e-09	52.80
IUUC-Fca-036051	Felis catus	34.59	1.00e-36	144.00
IUUC-Fal-037148	Ficedula albicollis	42.98	3.00e-17	80.90
IUUC-Fox-037960	Fusarium oxysporum	56.07	3.00e-85	306.00
IUUC-Fso-038107	Fusarium solani	53.40	1.00e-43	168.00
IUUC-Gmo-039080	Gadus morhua	43.81	2.00e-16	77.40
IUUC-Ggr-040116	Gaeumannomyces graminis	81.15	7.00e-44	169.00
IUUC-Gga-040133	Gallus gallus	38.04	2.00e-15	74.70
IUUC-Gac-042239	Gasterosteus aculeatus	33.81	3.00e-36	143.00
IUUC-Gma-044245	Glycine max	35.28	1.00e-42	165.00
IUUC-Ggo-045084	Gorilla gorilla	32.67	1.00e-32	131.00
IUUC-Hsa-046614	Homo sapiens	32.67	9.00e-33	132.00
IUUC-Hvu-047832	Hordeum vulgare	38.04	9.00e-25	105.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	33.81	5.00e-38	149.00
IUUC-Kpa-049314	Komagataella pastoris	33.51	1.00e-39	155.00
IUUC-Lch-049719	Latimeria chalumnae	35.88	5.00e-42	162.00
IUUC-Lpe-051087	Leersia perrieri	35.66	3.00e-26	110.00
IUUC-Loc-051748	Lepisosteus oculatus	40.00	2.00e-26	111.00
IUUC-Lma-053328	Leptosphaeria maculans	69.86	1.00e-27	112.00
IUUC-Laf-054589	Loxodonta africana	35.18	1.00e-22	98.60
IUUC-Mcc-055860	Macaca mulatta	33.42	2.00e-35	140.00
IUUC-Meu-056459	Macropus eugenii	39.45	3.00e-27	114.00
IUUC-Mor-057287	Magnaporthe oryzae	49.47	4.00e-45	173.00
IUUC-Mpo-057609	Magnaporthe poae	80.83	6.00e-43	165.00
IUUC-Mtr-058239	Medicago truncatula	34.48	7.00e-38	149.00
IUUC-Mla-058961	Melampsora laricipopulina	36.87	6.00e-21	93.20
IUUC-Mvi-060220	Microbotryum violaceum	34.30	4.00e-21	94.40
IUUC-Mmr-060819	Microcebus murinus	34.86	9.00e-39	152.00
IUUC-Mdo-062742	Monodelphis domestica	37.38	9.00e-43	165.00
IUUC-Mmu-063258	Mus musculus	35.08	6.00e-25	106.00
IUUC-Mac-065180	Musa acuminata	32.29	4.00e-34	136.00
IUUC-Mpu-066684	Mustela putorius furo	33.91	2.00e-36	144.00
IUUC-Mlu-067787	Myotis lucifugus	34.60	2.00e-22	97.80
IUUC-Nfi-068390	Neosartorya fischeri	50.96	5.00e-68	249.00
IUUC-Ncr-068685	Neurospora crassa	52.59	2.00e-45	174.00
IUUC-Nle-069846	Nomascus leucogenys	32.02	1.00e-18	85.10
IUUC-Opr-070234	Ochotona princeps	48.21	7.00e-10	56.20
IUUC-Ont-072484	Oreochromis niloticus	32.49	4.00e-40	156.00
IUUC-Oan-073572	Ornithorhynchus anatinus	36.57	6.00e-38	149.00
IUUC-Oba-075392	Oryza barthii	38.00	8.00e-25	106.00
IUUC-Obr-076660	Oryza brachyantha	33.93	4.00e-33	133.00
IUUC-Ogl-077067	Oryza glaberrima	35.16	6.00e-36	142.00
IUUC-Ogu-078883	Oryza glumaepatula	38.00	8.00e-25	105.00
IUUC-Oin-079817	Oryza indica	38.40	1.00e-25	108.00
IUUC-Olo-080929	Oryza longistaminata	38.00	5.00e-25	106.00
IUUC-Ome-081866	Oryza meridionalis	38.00	6.00e-25	106.00
IUUC-Oni-083092	Oryza nivara	38.40	1.00e-25	108.00
IUUC-Opu-083756	Oryza punctata	37.60	3.00e-25	107.00
IUUC-Oru-084816	Oryza rufipogon	38.40	1.00e-25	108.00
IUUC-Osa-086112	Oryza sativa	38.40	1.00e-25	108.00
IUUC-Ola-086540	Oryzias latipes	40.41	9.00e-15	72.80
IUUC-Olu-087843	Ostreococcus lucimarinus	43.85	2.00e-17	81.30
IUUC-Oga-089075	Otolemur garnettii	36.00	6.00e-22	96.30
IUUC-Oar-090387	Ovis aries	32.84	2.00e-20	91.70
IUUC-Ptr-090912	Pan troglodytes	32.81	1.00e-28	118.00
IUUC-Pan-092009	Papio anubis	35.81	9.00e-25	105.00
IUUC-Psi-093347	Pelodiscus sinensis	32.93	2.00e-11	61.20
IUUC-Pno-095064	Phaeosphaeria nodorum	52.94	4.00e-62	229.00
IUUC-Ppa-095654	Physcomitrella patens	50.39	5.00e-22	96.70
IUUC-Pfo-096607	Poecilia formosa	37.66	2.00e-35	140.00
IUUC-Pab-097738	Pongo abelii	34.29	2.00e-31	127.00
IUUC-Pop-099642	Populus trichocarpa	32.94	3.00e-36	144.00
IUUC-Pca-100652	Procavia capensis	52.94	8.00e-10	55.80
IUUC-Ppe-101368	Prunus persica	33.01	6.00e-36	142.00
IUUC-Pva-102412	Pteropus vampyrus	33.91	7.00e-35	139.00
IUUC-Pgr-103618	Puccinia graminis	35.73	1.00e-36	145.00
IUUC-Ptt-103717	Puccinia triticina	47.73	5.00e-21	93.60
IUUC-Pte-104303	Pyrenophora teres	59.76	1.00e-48	185.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	55.27	1.00e-74	271.00
IUUC-Rno-105569	Rattus norvegicus	35.40	9.00e-37	145.00
IUUC-Sce-106214	Saccharomyces cerevisiae	32.11	2.00e-18	84.70
IUUC-Sha-106918	Sarcophilus harrisii	36.04	1.00e-34	138.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	38.72	8.00e-55	205.00
IUUC-Spo-108298	Schizosaccharomyces pombe	39.29	2.00e-52	197.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	60.00	9.00e-51	192.00
IUUC-Smo-109518	Selaginella moellendorffii	52.94	3.00e-18	84.00
IUUC-Sit-109813	Setaria italica	32.35	1.00e-30	125.00
IUUC-Sly-111480	Solanum lycopersicum	33.74	3.00e-40	156.00
IUUC-Stu-112306	Solanum tuberosum	47.58	1.00e-20	92.00
IUUC-Sar-112925	Sorex araneus	41.96	1.00e-16	79.00
IUUC-Sbi-114459	Sorghum bicolor	33.33	3.00e-31	127.00
IUUC-Sre-114894	Sporisorium reilianum	45.07	1.00e-12	65.50
IUUC-Ssc-115460	Sus scrofa	34.73	3.00e-36	144.00
IUUC-Tgu-116918	Taeniopygia guttata	42.98	4.00e-17	80.50
IUUC-Tru-118651	Takifugu rubripes	30.93	1.00e-35	142.00
IUUC-Tsy-118836	Tarsius syrichta	41.96	1.00e-16	79.00
IUUC-Tni-120493	Tetraodon nigroviridis	39.34	2.00e-29	120.00
IUUC-Tca-121661	Theobroma cacao	48.80	6.00e-21	92.80
IUUC-Tre-121911	Trichoderma reesei	52.23	3.00e-74	270.00
IUUC-Tvi-122617	Trichoderma virens	53.81	2.00e-87	313.00
IUUC-Tae-124646	Triticum aestivum	38.76	1.00e-26	111.00
IUUC-Tur-126610	Triticum urartu	38.31	1.00e-26	112.00
IUUC-Tme-127092	Tuber melanosporum	49.88	1.00e-78	284.00
IUUC-Tbe-127603	Tupaia belangeri	45.52	4.00e-17	80.10
IUUC-Ttr-129232	Tursiops truncatus	36.72	1.00e-24	105.00
IUUC-Uma-129484	Ustilago maydis	42.25	2.00e-11	61.20
IUUC-Vda-129946	Verticillium dahliae	78.69	3.00e-43	167.00
IUUC-Vpa-130357	Vicugna pacos	52.94	6.00e-10	56.60
IUUC-Vvi-131039	Vitis vinifera	36.92	2.00e-27	114.00
IUUC-Xtr-132679	Xenopus tropicalis	42.31	2.00e-13	68.20
IUUC-Xma-133503	Xiphophorus maculatus	32.63	7.00e-41	159.00
IUUC-Yli-134615	Yarrowia lipolytica	38.07	9.00e-46	175.00
IUUC-Zma-135742	Zea mays	42.86	2.00e-17	81.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence