iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099351

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_801479; POPTR_0005s24700g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s24700	POPTR_0005s24700.1	POPTR_0005s24700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-31	108.1	236	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM dPv+++sG+tydr sI+kwl++g + cP trq+l++++l+Pn+t++++i +wceen++
   Q: 236  IPPYFRCPLSLELMLDPVIVASGQTYDRVSIQKWLDHGLSICPRTRQTLSHTNLIPNYTVKAMIANWCEENNV 308
           8*********************************************************************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDTSSVRCLI NTISRFIHLV SCQTRKFMPI QKDYKSMVMM LKHLKPVLDG VVDYSISSDE 60
VLCKECEELD TTVNEAREFM ENWCPQMSKI CSVQQSEALL KKIQSSALEI CQILCRLLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGTCTCTC TCCAATGCAG CTTTGTAATG AGAGCAGGGC ATCGGTTCTC TATCCACACT 60
GTTTTTTCAA GGCATAAAGC ATGGATCTTT GATAACTTTT GTACAAGTTA TACGTCTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0005s24700g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005439	Arabidopsis lyrata	55.63	0.00e+00	720.00
IUUC-Ath-007270	Arabidopsis thaliana	56.58	0.00e+00	736.00
IUUC-Bol-015931	Brassica oleracea	55.28	0.00e+00	730.00
IUUC-Bra-017191	Brassica rapa	55.24	0.00e+00	720.00
IUUC-Fso-038217	Fusarium solani	28.39	2.00e-17	83.60
IUUC-Gma-043908	Glycine max	60.78	0.00e+00	859.00
IUUC-Mtr-058671	Medicago truncatula	61.52	0.00e+00	832.00
IUUC-Mac-064726	Musa acuminata	53.80	0.00e+00	724.00
IUUC-Sly-111511	Solanum lycopersicum	58.41	0.00e+00	713.00
IUUC-Tca-121486	Theobroma cacao	66.79	0.00e+00	962.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence