iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075640

Ensembl Protein ID

OBART03G05500.1

UniProt Accession

I1VTI4; I1VTI4_9ORYZ

Genbank Protein ID

AFI48343.1; AFI48345.1; AFI48348.1; AFI48350.1

Protein Name

Integrins alpha chain family protein

Genbank Nucleotide ID

JQ414767; JQ414769; JQ414772; JQ414774

Gene Name

NP8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART03G05500	OBART03G05500.1	OBART03G05500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	29.2	286	326

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++++g   + lpC+Hv+ha+C+ +w       s +  CP+C
   Q: 286  CVICQMEYRRGnlQMMLPCKHVYHASCVTRW------LSINKVCPVC 326
           ****999999866446***************......********** PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MGIKRGGIGT SRADKRTTAR EPQKISPPSL PPSTLSPLPS PSRHRHRHLS RARHCPPPAR 60
PPPTTAAEAA PAGAGSTTTD SVHDPSEGMN GSRQMELHYI NTGFPYTITE SFMDFFEGLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTATAA AGCGGGGAGG GATAGGGACG AGCCGGGCGG ACAAGAGGAC GACAGCACGC 60
GAGCCACAGA AGATCTCGCC TCCCTCCCTC CCTCCCTCCA CCCTCTCCCC CCTCCCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0401--Integrin

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0007229--P:integrin-mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000725	Aegilops tauschii	87.55	1.00e-119	421.00
IUUC-Atr-002639	Amborella trichopoda	59.20	2.00e-78	285.00
IUUC-Aly-006328	Arabidopsis lyrata	50.61	5.00e-66	243.00
IUUC-Ath-006928	Arabidopsis thaliana	51.81	1.00e-65	242.00
IUUC-Bdi-014877	Brachypodium distachyon	90.08	2.00e-117	414.00
IUUC-Bol-015817	Brassica oleracea	48.62	2.00e-59	221.00
IUUC-Bra-017680	Brassica rapa	49.39	1.00e-63	235.00
IUUC-Cin-025552	Ciona intestinalis	39.22	2.00e-16	77.80
IUUC-Gma-043363	Glycine max	52.78	1.00e-71	262.00
IUUC-Hvu-047311	Hordeum vulgare	88.40	2.00e-113	400.00
IUUC-Lpe-051357	Leersia perrieri	91.20	3.00e-122	430.00
IUUC-Mtr-058603	Medicago truncatula	50.57	2.00e-70	258.00
IUUC-Mac-064965	Musa acuminata	64.80	2.00e-92	331.00
IUUC-Obr-076687	Oryza brachyantha	96.90	2.00e-131	461.00
IUUC-Ogl-077270	Oryza glaberrima	99.60	2.00e-130	457.00
IUUC-Ogu-078788	Oryza glumaepatula	99.61	1.00e-136	478.00
IUUC-Oin-079201	Oryza indica	99.61	3.00e-135	473.00
IUUC-Olo-080862	Oryza longistaminata	94.16	8.00e-124	435.00
IUUC-Ome-081787	Oryza meridionalis	96.75	8.00e-151	525.00
IUUC-Oni-082723	Oryza nivara	99.60	2.00e-130	457.00
IUUC-Opu-084164	Oryza punctata	97.60	1.00e-126	444.00
IUUC-Oru-084238	Oryza rufipogon	99.61	8.00e-135	472.00
IUUC-Osa-085989	Oryza sativa	99.60	2.00e-130	457.00
IUUC-Pop-099571	Populus trichocarpa	54.22	2.00e-72	264.00
IUUC-Ppe-101485	Prunus persica	57.43	2.00e-68	251.00
IUUC-Sit-110753	Setaria italica	88.00	1.00e-136	477.00
IUUC-Sly-111293	Solanum lycopersicum	52.59	4.00e-71	260.00
IUUC-Stu-112116	Solanum tuberosum	51.39	5.00e-70	256.00
IUUC-Sbi-114143	Sorghum bicolor	86.00	8.00e-134	468.00
IUUC-Tca-121815	Theobroma cacao	56.40	9.00e-78	282.00
IUUC-Tae-123276	Triticum aestivum	87.50	4.00e-119	420.00
IUUC-Tur-125974	Triticum urartu	87.55	4.00e-119	420.00
IUUC-Vvi-131594	Vitis vinifera	56.18	2.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence