iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043020

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000846

Gene Name

LOC100811153; GLYMA_13G225900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G29780	GLYMA13G29780.1	GLYMA13G29780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.70e-34	117.2	291	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lMrdPv++++G+tydrssI +w+++g++tcP+t+q l+++ lvPn +lr+li +wc ++++
   Q: 291  VPKDFCCPISLDLMRDPVIISTGQTYDRSSISRWMEEGHTTCPKTGQMLAHTRLVPNRALRNLIVKWCTAHGV 363
           8********************************************************************9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MASGAIFSSL RRRRSPTLEA FLAPVDLSDV ALVQTLISVA NEIVSCFSKR SFFFQRKNSR 60
SLIRKVEVFQ LLLEYLRDSQ SGSSCLPPTA VLCLKELYLL LYRSKILLDY CAQSSKLWLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGTCGCAG CAAAGCAAGG GGAAACCAAA CCTAACCCCA AAATAAATGC AAATAAAAAA 60
ACAAAACAAA AAATGAATGG ACCAGAATCT GCATGATCAA TCCGTCAAAC TTAGGAAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100811153

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	50.27	7.00e-146	511.00
IUUC-Atr-002566	Amborella trichopoda	45.72	5.00e-124	438.00
IUUC-Aly-006027	Arabidopsis lyrata	71.25	0.00e+00	910.00
IUUC-Ath-007054	Arabidopsis thaliana	69.72	0.00e+00	897.00
IUUC-Bdi-014675	Brachypodium distachyon	48.15	5.00e-148	518.00
IUUC-Bol-015991	Brassica oleracea	68.82	0.00e+00	825.00
IUUC-Bra-017296	Brassica rapa	69.71	0.00e+00	825.00
IUUC-Hvu-047822	Hordeum vulgare	47.39	9.00e-156	543.00
IUUC-Lch-050386	Latimeria chalumnae	41.79	3.00e-11	62.80
IUUC-Lpe-051105	Leersia perrieri	49.35	3.00e-151	528.00
IUUC-Mtr-057764	Medicago truncatula	88.42	0.00e+00	1173.00
IUUC-Oba-075480	Oryza barthii	51.69	3.00e-148	518.00
IUUC-Ogl-077156	Oryza glaberrima	48.71	5.00e-155	541.00
IUUC-Ogu-078640	Oryza glumaepatula	48.71	4.00e-155	541.00
IUUC-Oin-079253	Oryza indica	46.29	3.00e-142	499.00
IUUC-Olo-080903	Oryza longistaminata	51.69	1.00e-148	519.00
IUUC-Ome-081982	Oryza meridionalis	48.55	7.00e-154	537.00
IUUC-Oni-082824	Oryza nivara	48.71	4.00e-155	541.00
IUUC-Opu-083758	Oryza punctata	47.84	4.00e-152	531.00
IUUC-Oru-084718	Oryza rufipogon	48.71	4.00e-155	541.00
IUUC-Osa-085662	Oryza sativa	50.09	4.00e-153	535.00
IUUC-Pop-099239	Populus trichocarpa	78.19	0.00e+00	988.00
IUUC-Ppe-101890	Prunus persica	79.64	0.00e+00	958.00
IUUC-Smo-109110	Selaginella moellendorffii	40.28	5.00e-120	425.00
IUUC-Sit-110022	Setaria italica	50.32	3.00e-155	541.00
IUUC-Sly-111463	Solanum lycopersicum	76.56	0.00e+00	993.00
IUUC-Stu-111976	Solanum tuberosum	75.87	0.00e+00	988.00
IUUC-Sbi-114100	Sorghum bicolor	48.96	2.00e-153	535.00
IUUC-Tca-121221	Theobroma cacao	79.89	0.00e+00	1011.00
IUUC-Tae-124437	Triticum aestivum	48.01	2.00e-155	542.00
IUUC-Tur-126627	Triticum urartu	51.77	2.00e-140	492.00
IUUC-Vvi-131159	Vitis vinifera	73.85	0.00e+00	902.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence