iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114209

Ensembl Protein ID

Sb02g024880.1

UniProt Accession

C5XCV9; C5XCV9_SORBI

Genbank Protein ID

EER96746.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G204200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g024880	Sb02g024880.1	Sb02g024880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.10e-86	285.1	78	152
ULD/UDP/UBQ/UBQ_PIM	8.00e-53	177.1	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 2    likvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           +ikvktLtgkeiei+ie++dti+rikerveekeGiPP+qqrliyaGkql+ddkta+dyn+e+gsvLhLvLaLrGG
   Q: 78   MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
           8*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID RIKERVEEKE GIPPVQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAGAAAGA ATTTCTTGGG CGTTCTTCGG TTTCGTTCTC ACGCAGTTCT GTTCGAGTTC 60
GGCGCCGCGC CGTCAAGTCC CCTGACCGGC CTTGCGCGAG GGAGGAAGAG GCGAGGAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

KEGG

sbi:SORBI_02g024880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006536	Arabidopsis lyrata	98.69	6.00e-73	265.00
IUUC-Ath-006811	Arabidopsis thaliana	99.35	7.00e-74	268.00
IUUC-Bdi-014376	Brachypodium distachyon	100.00	3.00e-74	269.00
IUUC-Bol-015848	Brassica oleracea	100.00	1.00e-73	267.00
IUUC-Cre-022655	Chlamydomonas reinhardtii	94.74	1.00e-72	264.00
IUUC-Cho-024788	Choloepus hoffmanni	84.00	7.00e-25	103.00
IUUC-Gma-042815	Glycine max	99.34	6.00e-73	265.00
IUUC-Mtr-058632	Medicago truncatula	82.97	2.00e-68	250.00
IUUC-Mac-064471	Musa acuminata	98.04	7.00e-73	265.00
IUUC-Obr-076386	Oryza brachyantha	99.35	1.00e-73	267.00
IUUC-Ogl-077485	Oryza glaberrima	100.00	3.00e-74	269.00
IUUC-Oin-079667	Oryza indica	100.00	3.00e-74	269.00
IUUC-Oru-084963	Oryza rufipogon	99.35	6.00e-74	268.00
IUUC-Osa-085928	Oryza sativa	100.00	3.00e-74	269.00
IUUC-Ppa-095992	Physcomitrella patens	92.81	1.00e-71	260.00
IUUC-Pop-098831	Populus trichocarpa	98.03	2.00e-82	296.00
IUUC-Ppe-101565	Prunus persica	98.68	8.00e-83	298.00
IUUC-Sit-110816	Setaria italica	100.00	3.00e-74	269.00
IUUC-Sly-111900	Solanum lycopersicum	100.00	3.00e-73	266.00
IUUC-Stu-112424	Solanum tuberosum	100.00	3.00e-73	266.00
IUUC-Tca-121816	Theobroma cacao	98.04	9.00e-73	264.00
IUUC-Tae-124562	Triticum aestivum	99.35	4.00e-74	268.00
IUUC-Tur-126780	Triticum urartu	99.35	4.00e-74	268.00
IUUC-Vpa-130121	Vicugna pacos	78.12	4.00e-17	78.20
IUUC-Vvi-131310	Vitis vinifera	98.68	1.00e-72	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence