iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113794

UUCD1 version

UUC-SoB-00026

Ensembl Protein ID

Sb02g016200.1

UniProt Accession

A0A1B6QBC2; A0A1B6QBC2_SORBI

Genbank Protein ID

KXG35225.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G147600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g016200	Sb02g016200.1	Sb02g016200.1
Sb02g016200	Sb02g016200.2	Sb02g016200.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/HECT	3.70e-118	395.6	3314	3660
UBD/Alpha-Helix/UBA	6.40e-08	33.3	1213	1252

Active Site

Position(s)	Description	Evidence
3805	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 activity/HECT

   S: 2    ksdlkkrlevefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknpehlklFeflGrllgkalqdgrlldlplsks 95
            +dlk rl v+f+gEeg+d+gG+tre+++lls+ ++++ + lf ++ ++++t+qpnp+s ++ +ehl++F+f+Gr+++kal+dg+lld+++++s
   Q: 3314 TQDLKGRLTVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNNATFQPNPNSVFQ-TEHLSYFKFVGRVVAKALFDGQLLDVHFTRS 3405
           589************************************9999.566688999******985.5****************************** PP
   S: 96   fyklllgkklsledleevdpelykslkeikenaesdieelgldltfs..vseei............lgetkeeeLkpgGenipVtneNkeeYvk 175
           fyk++lg k++++d+e++dp++yk+lk+++en   d+++l  dltfs  ++ee+              +++++eLkpgG+ni+Vt+e k+eYv+
   Q: 3406 FYKHILGAKVTYHDIEAIDPDYYKNLKWMLEN---DVSDL-PDLTFSmdPDEEKhilyektefnnfSTQVTDYELKPGGRNIKVTEETKQEYVD 3495
           ******************************99...55555.444444225555578999999999889999*********************** PP
   S: 176  lvveyrlkegikeqveafreGfneviplellslFteeelellicGeeeidvedlkketkykggytedspaiqwFwevleefsseerkafLqFvT 269
           lv+e++l++ i+ q++ f eGf+e++p +l+slF+ +elelli+G +eid++dlk +t+y  gy++ sp+iqwFwev+++fs+e+ +++LqFvT
   Q: 3496 LVAEHILTTAIRPQINGFLEGFTELVPRDLISLFNDKELELLISGLPEIDLDDLKVNTEY-IGYSAASPVIQWFWEVVKAFSKEDMARLLQFVT 3588
           ************************************************************.55******************************* PP
   S: 270  gssrlPlgGfaelk....prlfvirk.dasddrlPssnTCfnyLkLPeYsskeilkekLlyAieet.kgFel 335
           g+s++Pl+Gf++l+    p++f+i+k ++++drlPs++TCfn+L+LPeY+ske+l+e+Ll+Ai+e+ +gF++
   Q: 3589 GTSKVPLEGFKALQgisgPQRFQIHKaYGAPDRLPSAHTCFNQLDLPEYTSKEQLEERLLLAIHEAsEGFGF 3660
           **************************99999***********************************9***85 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           de++++ +veMGF+r +a + Lr+   n++e+A+++L+++
   Q: 1213 DESAIATIVEMGFSRARAEESLRSIrTNSVEMATDWLFSH 1252
           79**********************669***********97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPPNIKSFIN SVTTVPLENV ELPLKNFAWE FDKGDFHHWV DLFNHFDSFF ESYIKSRKDL 60
HLEDNFLDVD PPFPREAVLQ ILRVSKLILE NCTNRHFYIF FEQHLSALLA STDADIIEAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCTG TTTATAACTC ATCTGTTAAT GAAACCTAAG CAGAGTGTGA TATTATATGA 60
AACAATTGTG TGCACAAGTT GGTTGCATTT GCTTATTGCT TTACATATGA TCGTTAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025527--DUF4414
IPR010309--E3_Ub_ligase_DUF908
IPR010314--E3_Ub_ligase_DUF913
IPR000569--HECT_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50237--HECT
PS50030--UBA

Pfam

PF14377--DUF4414
PF06012--DUF908
PF06025--DUF913
PF00632--HECT
PF00627--UBA

SMART

SM00119--HECTc
SM00165--UBA

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003044	Amborella trichopoda	57.13	0.00e+00	1412.00
IUUC-Apl-003893	Anas platyrhynchos	44.10	3.00e-93	335.00
IUUC-Aly-006083	Arabidopsis lyrata	48.74	0.00e+00	1961.00
IUUC-Ath-007472	Arabidopsis thaliana	49.14	0.00e+00	2067.00
IUUC-Ani-009412	Aspergillus nidulans	33.14	3.00e-155	543.00
IUUC-Bra-016637	Brassica rapa	49.64	0.00e+00	1284.00
IUUC-Fal-037604	Ficedula albicollis	44.10	1.00e-93	337.00
IUUC-Gma-044247	Glycine max	54.88	0.00e+00	2850.00
IUUC-Ggo-045332	Gorilla gorilla	43.61	4.00e-93	335.00
IUUC-Lpe-050915	Leersia perrieri	75.45	0.00e+00	4376.00
IUUC-Meu-056436	Macropus eugenii	39.25	8.00e-77	281.00
IUUC-Mor-057201	Magnaporthe oryzae	39.59	4.00e-133	470.00
IUUC-Mtr-058128	Medicago truncatula	52.19	0.00e+00	3049.00
IUUC-Mga-059362	Meleagris gallopavo	44.00	1.00e-92	333.00
IUUC-Mac-065557	Musa acuminata	67.57	0.00e+00	1417.00
IUUC-Opr-070443	Ochotona princeps	44.25	6.00e-95	342.00
IUUC-Oba-075252	Oryza barthii	76.51	0.00e+00	4425.00
IUUC-Obr-076762	Oryza brachyantha	75.67	0.00e+00	4460.00
IUUC-Ogl-077590	Oryza glaberrima	77.53	0.00e+00	1394.00
IUUC-Ogu-077981	Oryza glumaepatula	75.31	0.00e+00	4343.00
IUUC-Oin-079663	Oryza indica	74.80	0.00e+00	4294.00
IUUC-Olo-080326	Oryza longistaminata	76.70	0.00e+00	4441.00
IUUC-Ome-081289	Oryza meridionalis	84.52	0.00e+00	1425.00
IUUC-Oni-082342	Oryza nivara	76.57	0.00e+00	4427.00
IUUC-Opu-083428	Oryza punctata	76.78	0.00e+00	4443.00
IUUC-Oru-084559	Oryza rufipogon	76.54	0.00e+00	4427.00
IUUC-Osa-086200	Oryza sativa	78.48	0.00e+00	1939.00
IUUC-Ptr-091629	Pan troglodytes	44.50	6.00e-95	341.00
IUUC-Psi-093645	Pelodiscus sinensis	44.10	3.00e-94	338.00
IUUC-Pma-094364	Petromyzon marinus	43.37	2.00e-89	321.00
IUUC-Pop-099520	Populus trichocarpa	54.00	0.00e+00	3249.00
IUUC-Pca-100568	Procavia capensis	43.00	7.00e-87	315.00
IUUC-Ppe-102109	Prunus persica	56.21	0.00e+00	2977.00
IUUC-Pva-102354	Pteropus vampyrus	43.61	3.00e-93	335.00
IUUC-Rno-105318	Rattus norvegicus	43.61	2.00e-93	336.00
IUUC-Sce-106449	Saccharomyces cerevisiae	29.81	1.00e-126	448.00
IUUC-Ssl-108514	Sclerotinia sclerotiorum	43.20	1.00e-94	340.00
IUUC-Sit-110149	Setaria italica	84.92	0.00e+00	5611.00
IUUC-Sly-111285	Solanum lycopersicum	53.98	0.00e+00	2896.00
IUUC-Stu-112501	Solanum tuberosum	67.91	7.00e-127	446.00
IUUC-Tgu-117130	Taeniopygia guttata	44.10	2.00e-93	336.00
IUUC-Tsy-118806	Tarsius syrichta	43.75	2.00e-92	333.00
IUUC-Tca-121646	Theobroma cacao	55.50	0.00e+00	2936.00
IUUC-Tbe-127408	Tupaia belangeri	42.32	1.00e-85	310.00
IUUC-Vvi-131170	Vitis vinifera	58.37	0.00e+00	1587.00
IUUC-Yli-134657	Yarrowia lipolytica	32.40	2.00e-141	498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence