iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116211

Ensembl Protein ID

ENSSSCP00000018877.2

UniProt Accession

F1RHH8; F1RHH8_PIG

Genbank Protein ID

ENSSSCP00000018877

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312656

Gene Name

PRPF8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000017817.2	ENSSSCT00000019391.2	ENSSSCP00000018877.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Jab_MPN	62.56	0.00e+00	2872.00	IUUC-Sce-106157
UBD/Jab_MPN	62.52	0.00e+00	2870.00	IUUC-Ots-000011

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

XLLENMPMPW EQIPDVPVLY HITGAISFVN EIPWVIEPVY ISQWGSMWIM MRREKRDRRH 60
FKRMRFPPFD DEEPPLDYAD NILDVEPLEA IQLELDPEED APVLDWFYDH QPLRDSRKYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNACTCCTGG AGAACATGCC 60
GATGCCTTGG GAGCAGATTC CGGATGTGCC TGTGCTATAC CACATCACCG GAGCCATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000555--JAMM/MPN+_dom
IPR012591--PRO8NT
IPR012592--PROCN
IPR012984--PROCT
IPR027652--PRP8
IPR021983--PRP8_domainIV
IPR019581--Prp8_U5-snRNA-bd
IPR019580--Prp8_U6-snRNA-bd
IPR012337--RNaseH-like_dom
IPR019582--RRM_spliceosomal_PrP8

Pfam

PF01398--JAB
PF08082--PRO8NT
PF08083--PROCN
PF08084--PROCT
PF12134--PRP8_domainIV
PF10598--RRM_4
PF10597--U5_2-snRNA_bdg
PF10596--U6-snRNA_bdg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0016020--C:membrane
GO:0030623--F:U5 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000244--P:spliceosomal tri-snRNP complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001091	Aegilops tauschii	83.59	0.00e+00	3903.00
IUUC-Aml-002261	Ailuropoda melanoleuca	99.73	0.00e+00	4481.00
IUUC-Atr-002524	Amborella trichopoda	83.68	0.00e+00	3888.00
IUUC-Apl-004039	Anas platyrhynchos	99.29	0.00e+00	4459.00
IUUC-Aca-005394	Anolis carolinensis	97.51	0.00e+00	3537.00
IUUC-Aly-005909	Arabidopsis lyrata	83.27	0.00e+00	3883.00
IUUC-Ath-007237	Arabidopsis thaliana	83.44	0.00e+00	3901.00
IUUC-Ago-007815	Ashbya gossypii	62.69	0.00e+00	2952.00
IUUC-Acl-008111	Aspergillus clavatus	74.10	0.00e+00	3484.00
IUUC-Afl-008609	Aspergillus flavus	74.23	0.00e+00	2200.00
IUUC-Afu-009078	Aspergillus fumigatus	74.52	0.00e+00	2258.00
IUUC-Ani-009297	Aspergillus nidulans	73.48	0.00e+00	2220.00
IUUC-Ang-009749	Aspergillus niger	74.00	0.00e+00	3476.00
IUUC-Aor-010106	Aspergillus oryzae	74.04	0.00e+00	3487.00
IUUC-Ate-010566	Aspergillus terreus	74.19	0.00e+00	3488.00
IUUC-Ame-011416	Astyanax mexicanus	97.81	0.00e+00	4465.00
IUUC-Bgr-012078	Blumeria graminis	70.94	0.00e+00	2118.00
IUUC-Bta-013532	Bos taurus	99.73	0.00e+00	4481.00
IUUC-Bci-013914	Botrytis cinerea	74.10	0.00e+00	2237.00
IUUC-Bdi-014349	Brachypodium distachyon	83.55	0.00e+00	3890.00
IUUC-Bol-015707	Brassica oleracea	83.14	0.00e+00	3881.00
IUUC-Bra-017086	Brassica rapa	82.36	0.00e+00	3852.00
IUUC-Cel-018508	Caenorhabditis elegans	86.86	0.00e+00	4017.00
IUUC-Cja-019483	Callithrix jacchus	99.73	0.00e+00	4481.00
IUUC-Cfa-021018	Canis familiaris	99.73	0.00e+00	4481.00
IUUC-Cpo-022159	Cavia porcellus	99.73	0.00e+00	4481.00
IUUC-Cre-022998	Chlamydomonas reinhardtii	81.27	0.00e+00	3749.00
IUUC-Csa-023885	Chlorocebus sabaeus	99.73	0.00e+00	4481.00
IUUC-Cho-024639	Choloepus hoffmanni	94.21	0.00e+00	2578.00
IUUC-Cin-025356	Ciona intestinalis	83.00	2.00e-180	625.00
IUUC-Csv-025880	Ciona savignyi	90.92	0.00e+00	4191.00
IUUC-Cgl-026713	Colletotrichum gloeosporioides	70.84	0.00e+00	3361.00
IUUC-Cne-026874	Cryptococcus neoformans	75.86	0.00e+00	2127.00
IUUC-Cme-027252	Cyanidioschyzon merolae	33.93	0.00e+00	988.00
IUUC-Dre-027996	Danio rerio	97.95	0.00e+00	4469.00
IUUC-Dno-029708	Dasypus novemcinctus	99.76	0.00e+00	4127.00
IUUC-Dor-030119	Dipodomys ordii	95.91	0.00e+00	4167.00
IUUC-Dse-031333	Dothistroma septosporum	72.96	0.00e+00	3402.00
IUUC-Dme-031908	Drosophila melanogaster	92.18	0.00e+00	4170.00
IUUC-Ete-032766	Echinops telfairi	94.02	0.00e+00	4207.00
IUUC-Eca-034109	Equus caballus	99.73	0.00e+00	4481.00
IUUC-Eeu-035094	Erinaceus europaeus	98.20	0.00e+00	2328.00
IUUC-Fca-035567	Felis catus	99.73	0.00e+00	3643.00
IUUC-Fal-036613	Ficedula albicollis	99.42	0.00e+00	4469.00
IUUC-Fox-037855	Fusarium oxysporum	72.51	0.00e+00	3404.00
IUUC-Fso-038078	Fusarium solani	72.20	0.00e+00	3390.00
IUUC-Gmo-038986	Gadus morhua	95.54	0.00e+00	4380.00
IUUC-Ggr-039855	Gaeumannomyces graminis	72.04	0.00e+00	3360.00
IUUC-Gga-040719	Gallus gallus	99.42	0.00e+00	4471.00
IUUC-Gac-042502	Gasterosteus aculeatus	97.24	0.00e+00	4433.00
IUUC-Gma-043317	Glycine max	83.42	0.00e+00	3852.00
IUUC-Ggo-045622	Gorilla gorilla	93.98	0.00e+00	4144.00
IUUC-Hsa-046060	Homo sapiens	99.73	0.00e+00	4481.00
IUUC-Hvu-047251	Hordeum vulgare	84.41	0.00e+00	3667.00
IUUC-Itr-048517	Ictidomys tridecemlineatus	99.66	0.00e+00	2245.00
IUUC-Kpa-049289	Komagataella pastoris	64.96	0.00e+00	3059.00
IUUC-Lch-049690	Latimeria chalumnae	98.29	0.00e+00	4077.00
IUUC-Lpe-050868	Leersia perrieri	82.57	0.00e+00	3863.00
IUUC-Loc-052365	Lepisosteus oculatus	97.77	0.00e+00	4472.00
IUUC-Lma-053043	Leptosphaeria maculans	73.64	0.00e+00	3482.00
IUUC-Laf-053582	Loxodonta africana	99.73	0.00e+00	4481.00
IUUC-Mcc-055024	Macaca mulatta	99.73	0.00e+00	4481.00
IUUC-Meu-056637	Macropus eugenii	97.72	0.00e+00	4363.00
IUUC-Mor-057244	Magnaporthe oryzae	72.16	0.00e+00	3331.00
IUUC-Mpo-057580	Magnaporthe poae	72.08	0.00e+00	3364.00
IUUC-Mtr-058326	Medicago truncatula	83.42	0.00e+00	3884.00
IUUC-Mla-059121	Melampsora laricipopulina	76.63	0.00e+00	3495.00
IUUC-Mga-059789	Meleagris gallopavo	99.42	0.00e+00	4471.00
IUUC-Mvi-060563	Microbotryum violaceum	75.04	0.00e+00	3486.00
IUUC-Mmr-060880	Microcebus murinus	98.48	0.00e+00	4409.00
IUUC-Mdo-062237	Monodelphis domestica	99.60	0.00e+00	4480.00
IUUC-Mmu-064177	Mus musculus	99.64	0.00e+00	4479.00
IUUC-Mac-065558	Musa acuminata	81.62	0.00e+00	3740.00
IUUC-Mpu-066903	Mustela putorius furo	99.73	0.00e+00	4481.00
IUUC-Mlu-067424	Myotis lucifugus	99.64	0.00e+00	4481.00
IUUC-Nfi-068265	Neosartorya fischeri	74.40	0.00e+00	2252.00
IUUC-Ncr-068963	Neurospora crassa	72.89	0.00e+00	3405.00
IUUC-Nle-069111	Nomascus leucogenys	99.00	0.00e+00	3237.00
IUUC-Opr-070706	Ochotona princeps	99.42	0.00e+00	4454.00
IUUC-Ont-071405	Oreochromis niloticus	98.12	0.00e+00	4455.00
IUUC-Oan-073481	Ornithorhynchus anatinus	99.53	0.00e+00	2200.00
IUUC-Ocu-074231	Oryctolagus cuniculus	99.73	0.00e+00	4481.00
IUUC-Oba-075452	Oryza barthii	83.64	0.00e+00	3879.00
IUUC-Obr-076377	Oryza brachyantha	83.68	0.00e+00	3874.00
IUUC-Ogl-077666	Oryza glaberrima	83.68	0.00e+00	3880.00
IUUC-Ogu-078187	Oryza glumaepatula	83.68	0.00e+00	3878.00
IUUC-Oin-079234	Oryza indica	83.64	0.00e+00	3877.00
IUUC-Olo-080543	Oryza longistaminata	83.68	0.00e+00	3877.00
IUUC-Ome-081541	Oryza meridionalis	83.19	0.00e+00	3845.00
IUUC-Oni-082712	Oryza nivara	85.49	0.00e+00	3064.00
IUUC-Opu-083904	Oryza punctata	83.55	0.00e+00	3869.00
IUUC-Oru-084749	Oryza rufipogon	83.68	0.00e+00	3881.00
IUUC-Osa-085504	Oryza sativa	85.55	0.00e+00	2049.00
IUUC-Ola-087464	Oryzias latipes	97.92	0.00e+00	4345.00
IUUC-Olu-087705	Ostreococcus lucimarinus	81.30	0.00e+00	3808.00
IUUC-Oga-087910	Otolemur garnettii	100.00	7.00e-75	271.00
IUUC-Oar-089892	Ovis aries	99.87	0.00e+00	4491.00
IUUC-Ptr-090562	Pan troglodytes	96.80	0.00e+00	917.00
IUUC-Pan-092555	Papio anubis	99.73	0.00e+00	4478.00
IUUC-Psi-094049	Pelodiscus sinensis	99.37	0.00e+00	4467.00
IUUC-Pma-094240	Petromyzon marinus	93.57	0.00e+00	4237.00
IUUC-Pno-095146	Phaeosphaeria nodorum	72.13	0.00e+00	3387.00
IUUC-Ppa-095776	Physcomitrella patens	83.42	0.00e+00	3883.00
IUUC-Pfo-097177	Poecilia formosa	97.90	0.00e+00	4448.00
IUUC-Pab-097961	Pongo abelii	99.73	0.00e+00	4481.00
IUUC-Pop-099731	Populus trichocarpa	83.28	0.00e+00	3878.00
IUUC-Pca-100655	Procavia capensis	93.98	0.00e+00	1613.00
IUUC-Ppe-101199	Prunus persica	81.58	0.00e+00	3779.00
IUUC-Pva-103175	Pteropus vampyrus	99.38	0.00e+00	3612.00
IUUC-Pgr-103467	Puccinia graminis	76.47	0.00e+00	3503.00
IUUC-Ptt-103770	Puccinia triticina	70.35	0.00e+00	3126.00
IUUC-Pte-104210	Pyrenophora teres	72.87	0.00e+00	3427.00
IUUC-Pyt-104572	Pyrenophora triticirepentis	73.22	0.00e+00	2192.00
IUUC-Rno-105997	Rattus norvegicus	99.64	0.00e+00	4479.00
IUUC-Sce-106157	Saccharomyces cerevisiae	62.52	0.00e+00	2926.00
IUUC-Sha-107355	Sarcophilus harrisii	99.55	0.00e+00	4478.00
IUUC-Sja-107760	Schizosaccharomyces japonicus	74.77	0.00e+00	3469.00
IUUC-Spo-108160	Schizosaccharomyces pombe	74.16	0.00e+00	3445.00
IUUC-Ssl-108519	Sclerotinia sclerotiorum	73.95	0.00e+00	2227.00
IUUC-Smo-109278	Selaginella moellendorffii	84.17	0.00e+00	3881.00
IUUC-Sit-110777	Setaria italica	83.82	0.00e+00	3900.00
IUUC-Sly-110889	Solanum lycopersicum	83.62	0.00e+00	3892.00
IUUC-Stu-112016	Solanum tuberosum	83.53	0.00e+00	3892.00
IUUC-Sar-113245	Sorex araneus	95.43	0.00e+00	2672.00
IUUC-Sbi-114423	Sorghum bicolor	84.62	0.00e+00	1821.00
IUUC-Sre-115077	Sporisorium reilianum	67.57	0.00e+00	3134.00
IUUC-Tgu-116697	Taeniopygia guttata	99.42	0.00e+00	4469.00
IUUC-Tru-117984	Takifugu rubripes	97.72	0.00e+00	4458.00
IUUC-Tsy-118893	Tarsius syrichta	99.49	0.00e+00	1543.00
IUUC-Tni-120620	Tetraodon nigroviridis	98.45	0.00e+00	3414.00
IUUC-Tca-121331	Theobroma cacao	83.59	0.00e+00	3888.00
IUUC-Tre-122031	Trichoderma reesei	73.17	0.00e+00	3404.00
IUUC-Tvi-122603	Trichoderma virens	72.68	0.00e+00	3387.00
IUUC-Tae-125167	Triticum aestivum	83.55	0.00e+00	3902.00
IUUC-Tur-126772	Triticum urartu	83.37	0.00e+00	3902.00
IUUC-Tme-126899	Tuber melanosporum	73.90	0.00e+00	3467.00
IUUC-Tbe-127364	Tupaia belangeri	99.72	0.00e+00	2969.00
IUUC-Ttr-129009	Tursiops truncatus	99.11	0.00e+00	4445.00
IUUC-Vda-130015	Verticillium dahliae	71.57	0.00e+00	2182.00
IUUC-Vpa-130769	Vicugna pacos	93.59	0.00e+00	1112.00
IUUC-Vvi-131030	Vitis vinifera	83.23	0.00e+00	3863.00
IUUC-Xtr-132067	Xenopus tropicalis	98.84	0.00e+00	4473.00
IUUC-Xma-134252	Xiphophorus maculatus	97.77	0.00e+00	4445.00
IUUC-Yli-134434	Yarrowia lipolytica	65.58	0.00e+00	3066.00
IUUC-Zma-134994	Zea mays	83.42	0.00e+00	3880.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence