iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d036359	Zm00001d036359_T003	Zm00001d036359_T003
Zm00001d036359	Zm00001d036359_T001	Zm00001d036359_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-06	28.6	257	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H ++vt++af  + +l+++++ D +ik+WDlr+
   Q: 257  HHGPVTAVAFdRGgNLMATAGVDRKIKIWDLRK 289
           8899******96679***************986 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAHGDFVTPE NTPIAALHQA LGDKKLKGQL SVKEKLYGQS AKAAANAEKW LMPNDGGILE 60
PGHLEKTYRF SQEDILTEVD LLSSRKPFDM ILPVLGPYNI GYTSNGRYML VGGRKGHLAM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCACG GTGATTTCGT GACGCCAGAG AATACCCCGA TCGCTGCTCT TCACCAGGTT 60
ATCCTGCGGA CGGTCCCTCC TATGTAATGG CAAAGCTCCA GTGATGGACC ATGACACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	79.52	0.00e+00	778.00
IUUC-Atr-002528	Amborella trichopoda	66.00	2.00e-165	575.00
IUUC-Aly-005663	Arabidopsis lyrata	61.97	1.00e-164	572.00
IUUC-Ath-007405	Arabidopsis thaliana	62.17	2.00e-164	572.00
IUUC-Ang-009764	Aspergillus niger	39.19	5.00e-94	338.00
IUUC-Ame-011572	Astyanax mexicanus	46.24	3.00e-88	318.00
IUUC-Bdi-014459	Brachypodium distachyon	82.52	0.00e+00	752.00
IUUC-Bol-015965	Brassica oleracea	62.42	4.00e-159	553.00
IUUC-Bra-016837	Brassica rapa	62.45	7.00e-153	533.00
IUUC-Cel-018465	Caenorhabditis elegans	44.84	2.00e-91	328.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	46.51	1.00e-127	449.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	40.60	3.00e-98	352.00
IUUC-Cne-026784	Cryptococcus neoformans	36.96	2.00e-69	256.00
IUUC-Dre-028533	Danio rerio	44.22	1.00e-83	303.00
IUUC-Dse-031280	Dothistroma septosporum	39.02	4.00e-91	328.00
IUUC-Eeu-034982	Erinaceus europaeus	46.55	6.00e-52	197.00
IUUC-Fox-037980	Fusarium oxysporum	39.84	2.00e-95	342.00
IUUC-Fso-038154	Fusarium solani	40.30	1.00e-95	343.00
IUUC-Gmo-039548	Gadus morhua	45.29	1.00e-89	323.00
IUUC-Ggr-039976	Gaeumannomyces graminis	39.32	5.00e-94	337.00
IUUC-Gac-042249	Gasterosteus aculeatus	43.07	7.00e-88	317.00
IUUC-Gma-042693	Glycine max	64.11	1.00e-175	608.00
IUUC-Hvu-047436	Hordeum vulgare	81.87	3.00e-164	570.00
IUUC-Kpa-049329	Komagataella pastoris	44.84	2.00e-93	335.00
IUUC-Lpe-051501	Leersia perrieri	82.35	0.00e+00	738.00
IUUC-Loc-051736	Lepisosteus oculatus	43.06	1.00e-89	323.00
IUUC-Meu-056419	Macropus eugenii	45.50	3.00e-78	285.00
IUUC-Mor-057146	Magnaporthe oryzae	40.12	6.00e-96	344.00
IUUC-Mpo-057512	Magnaporthe poae	39.36	2.00e-94	339.00
IUUC-Mtr-058139	Medicago truncatula	59.48	2.00e-172	598.00
IUUC-Mla-059028	Melampsora laricipopulina	40.44	1.00e-81	296.00
IUUC-Mvi-060533	Microbotryum violaceum	40.75	3.00e-82	299.00
IUUC-Mac-065643	Musa acuminata	76.06	0.00e+00	688.00
IUUC-Ont-071977	Oreochromis niloticus	45.28	5.00e-88	318.00
IUUC-Oba-075525	Oryza barthii	80.36	0.00e+00	756.00
IUUC-Obr-076468	Oryza brachyantha	81.95	0.00e+00	758.00
IUUC-Ogl-077395	Oryza glaberrima	80.36	0.00e+00	756.00
IUUC-Ogu-078730	Oryza glumaepatula	80.36	0.00e+00	757.00
IUUC-Oin-079797	Oryza indica	80.56	0.00e+00	758.00
IUUC-Olo-080539	Oryza longistaminata	80.36	0.00e+00	751.00
IUUC-Oni-082635	Oryza nivara	80.36	0.00e+00	755.00
IUUC-Opu-083733	Oryza punctata	80.96	0.00e+00	775.00
IUUC-Oru-084560	Oryza rufipogon	80.56	0.00e+00	758.00
IUUC-Osa-085463	Oryza sativa	80.56	0.00e+00	758.00
IUUC-Ola-086667	Oryzias latipes	43.83	4.00e-95	341.00
IUUC-Olu-087881	Ostreococcus lucimarinus	44.44	8.00e-108	383.00
IUUC-Pma-094742	Petromyzon marinus	44.51	2.00e-83	302.00
IUUC-Ppa-095230	Physcomitrella patens	50.30	3.00e-138	484.00
IUUC-Pop-099756	Populus trichocarpa	62.68	1.00e-165	575.00
IUUC-Ppe-101354	Prunus persica	65.91	1.00e-164	572.00
IUUC-Pte-104146	Pyrenophora teres	38.66	7.00e-91	327.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	38.26	3.00e-90	325.00
IUUC-Sce-106227	Saccharomyces cerevisiae	42.52	9.00e-96	343.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	45.71	3.00e-99	355.00
IUUC-Spo-108359	Schizosaccharomyces pombe	47.71	3.00e-97	348.00
IUUC-Smo-108814	Selaginella moellendorffii	55.41	4.00e-128	451.00
IUUC-Sit-110158	Setaria italica	89.28	0.00e+00	807.00
IUUC-Sly-111569	Solanum lycopersicum	64.78	1.00e-161	562.00
IUUC-Stu-112403	Solanum tuberosum	64.50	3.00e-168	584.00
IUUC-Sbi-113839	Sorghum bicolor	95.67	0.00e+00	850.00
IUUC-Sre-115150	Sporisorium reilianum	42.72	4.00e-89	322.00
IUUC-Tru-118535	Takifugu rubripes	45.58	3.00e-94	338.00
IUUC-Tca-121165	Theobroma cacao	63.78	2.00e-174	605.00
IUUC-Tre-122114	Trichoderma reesei	41.53	1.00e-99	356.00
IUUC-Tvi-122437	Trichoderma virens	45.21	1.00e-97	350.00
IUUC-Tae-125874	Triticum aestivum	79.52	0.00e+00	778.00
IUUC-Tur-126307	Triticum urartu	75.34	0.00e+00	750.00
IUUC-Tme-127208	Tuber melanosporum	47.40	2.00e-99	355.00
IUUC-Ttr-129047	Tursiops truncatus	43.44	5.00e-87	314.00
IUUC-Uma-129320	Ustilago maydis	43.03	3.00e-89	322.00
IUUC-Vda-129926	Verticillium dahliae	38.97	5.00e-92	331.00
IUUC-Vvi-131643	Vitis vinifera	65.85	3.00e-175	607.00
IUUC-Yli-134674	Yarrowia lipolytica	41.94	7.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence