iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006960

UUCD1 version

UUC-ArT-00923

Ensembl Protein ID

AT3G02340.1

UniProt Accession

Q9FWA5; Q9FWA5_ARATH

Genbank Protein ID

AAG12602.1; AAP12856.1; AEE73794.1; ANM65223.1; BAE99789.1

Protein Name

At3g02340; Putative uncharacterized protein At3g02340; RING zinc-finger protein, putative; 7563-8792; RING/U-box superfamily protein

Genbank Nucleotide ID

AC068900; BT006207; CP002686; CP002686; AK227808

Gene Name

At3g02340; F11A12.3; F11A12_3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G02340	AT3G02340.1	AT3G02340.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	31.9	335	376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++++  ++ ++ lpC H++h +C+  w         + +CP+Cr
   Q: 335  CAVCKDEMlvEEKVRRLPCSHFYHGECIIPW------LGIRNTCPVCR 376
           ********99666******************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MASTKPDSAI NLEEEAEGDG VAVDDPIFIP ETTNLLVRYS PFDDRDIDCN PYFPFTGPIS 60
DSGSGSYSDS EPDPNSCPID FFDRDSSDVD VAEYLESGGL TAGDYNIWGF YDPKEDEEEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTAATTAC TTTTCTCTGA GACACAGCAA TGGCGTCGAC GAAGCCCGAT TCCGCAATCA 60
ACCTTGAAGA AGAGGCTGAA GGCGACGGTG TAGCCGTAGA CGATCCGATT TTCATACCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005543	Arabidopsis lyrata	84.02	4.00e-178	616.00
IUUC-Bol-015267	Brassica oleracea	60.30	8.00e-95	339.00
IUUC-Bra-017949	Brassica rapa	61.02	4.00e-101	360.00
IUUC-Gma-043053	Glycine max	50.60	2.00e-41	162.00
IUUC-Lch-049758	Latimeria chalumnae	51.19	5.00e-23	99.80
IUUC-Loc-052244	Lepisosteus oculatus	48.48	2.00e-21	94.40
IUUC-Mtr-057647	Medicago truncatula	50.33	1.00e-32	133.00
IUUC-Mac-065058	Musa acuminata	40.79	1.00e-39	156.00
IUUC-Ola-087215	Oryzias latipes	52.87	3.00e-22	97.10
IUUC-Ppe-101891	Prunus persica	38.18	1.00e-41	162.00
IUUC-Sly-110977	Solanum lycopersicum	50.94	2.00e-37	149.00
IUUC-Stu-112415	Solanum tuberosum	49.38	6.00e-36	144.00
IUUC-Sar-113319	Sorex araneus	52.54	4.00e-15	74.70
IUUC-Sbi-114270	Sorghum bicolor	49.04	5.00e-24	104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence