iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017049

Ensembl Protein ID

Bra003314.1-P

UniProt Accession

M4CGI1; M4CGI1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003314	Bra003314.1	Bra003314.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-06	27.4	138	178
E3 activity/RING/U-box	1.30e-06	29.4	135	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  k+ p+++ CgH+++  Cl +w     + s +  CP+C+
   Q: 138  CNICLDLSKE-PVLTCCGHLYCWPCLFQW----LQISEAKECPVCK 178
           99******99.999***************....8899999*****7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPn 58
           +f C I l+l ++Pv +++G+ y   ++ +wl+ ++  +cPv++ ++t+++++P 
   Q: 135  FFDCNICLDLSKEPVLTCCGHLYCWPCLFQWLQISEAkECPVCKGEVTPKTVTPI 189
           79******************************6555448**************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGEELADTMN LDLNLGPDPE SDLQPTLNET VNLADWTNDP SQRSSEAVTR IRTRHRTRFR 60
QLNLPIPILS ETHMSIELNQ LMGSPVTGAA LQTGEGSERG NEDLKMCENG DGAIGDGVSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGAGG AGTTAGCTGA CACAATGAAC CTAGATTTGA ATCTAGGGCC TGATCCTGAG 60
TCAGATCTCC AGCCGACCCT AAACGAAACT GTCAATCTGG CTGATTGGAC TAATGACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000500	Aegilops tauschii	49.14	7.00e-31	127.00
IUUC-Atr-002855	Amborella trichopoda	55.75	3.00e-30	126.00
IUUC-Aly-006126	Arabidopsis lyrata	92.02	0.00e+00	709.00
IUUC-Ath-007143	Arabidopsis thaliana	91.09	0.00e+00	706.00
IUUC-Ago-007781	Ashbya gossypii	42.55	6.00e-08	51.60
IUUC-Bdi-014417	Brachypodium distachyon	51.96	8.00e-31	128.00
IUUC-Bol-015310	Brassica oleracea	98.50	0.00e+00	758.00
IUUC-Gma-042913	Glycine max	50.98	1.00e-96	346.00
IUUC-Hvu-047679	Hordeum vulgare	51.46	7.00e-31	127.00
IUUC-Lpe-051486	Leersia perrieri	49.57	5.00e-32	132.00
IUUC-Mtr-057874	Medicago truncatula	49.68	2.00e-98	352.00
IUUC-Mac-064953	Musa acuminata	55.79	5.00e-30	125.00
IUUC-Oba-075089	Oryza barthii	47.97	8.00e-31	128.00
IUUC-Obr-076527	Oryza brachyantha	48.78	3.00e-31	129.00
IUUC-Ogl-077589	Oryza glaberrima	47.97	8.00e-31	128.00
IUUC-Ogu-078192	Oryza glumaepatula	47.97	1.00e-30	127.00
IUUC-Oin-079645	Oryza indica	51.96	5.00e-30	125.00
IUUC-Olo-080972	Oryza longistaminata	51.96	5.00e-30	125.00
IUUC-Ome-081574	Oryza meridionalis	47.97	1.00e-30	127.00
IUUC-Oni-082269	Oryza nivara	47.97	2.00e-30	127.00
IUUC-Opu-083935	Oryza punctata	47.73	4.00e-31	128.00
IUUC-Oru-084734	Oryza rufipogon	49.59	9.00e-31	127.00
IUUC-Osa-085691	Oryza sativa	47.97	1.00e-30	127.00
IUUC-Olu-087623	Ostreococcus lucimarinus	46.58	2.00e-18	84.70
IUUC-Ppa-095532	Physcomitrella patens	57.97	7.00e-24	105.00
IUUC-Pop-099819	Populus trichocarpa	51.57	7.00e-105	373.00
IUUC-Ppe-101193	Prunus persica	55.65	4.00e-87	314.00
IUUC-Sit-110715	Setaria italica	50.41	7.00e-32	131.00
IUUC-Sly-111147	Solanum lycopersicum	47.84	3.00e-80	291.00
IUUC-Stu-112419	Solanum tuberosum	47.65	3.00e-82	298.00
IUUC-Sbi-114164	Sorghum bicolor	46.10	7.00e-32	131.00
IUUC-Tca-121427	Theobroma cacao	51.96	6.00e-92	330.00
IUUC-Tae-125367	Triticum aestivum	50.45	1.00e-30	127.00
IUUC-Tur-126535	Triticum urartu	50.45	7.00e-31	127.00
IUUC-Vvi-131195	Vitis vinifera	46.30	1.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence