iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021419

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02015139

Gene Name

SCAF11

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000005084.3	ENSCPOT00000005139.2	ENSCPOP00000004572.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-07	30.4	48	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ +  k+  +  +C+Hvf+ +C+ kw      + + ++CP++r
   Q: 48   CPICLNYLleKEVGFPESCNHVFCMTCILKW------AETLASCPIDR 89
           ******997544344477*************......********986 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

ETLSQGEMKK KTVYTLHMGD QEHEDMEGEA SRNNTAIAGL LYSEADRCPI CLNYLLEKEV 60
GFPESCNHVF CMTCILKWAE TLASCPIDRK PFQAVFKFSA LEGCIKVQVK RQLRETKDNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAACACTTT CTCAAGGAGA AATGAAGAAG AAAACTGTAT ATACCCTACA CATGGGAGAT 60
CAAGAGCATG AAGATATGGA AGGTAACTTC ATTTTTATAA AGTTTGTGTG TTGAAAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015970--P40_nucleoprot_sub2_BD-vir
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016604--C:nuclear body
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006143	Arabidopsis lyrata	34.43	8.00e-07	47.40
IUUC-Bdi-014704	Brachypodium distachyon	38.33	1.00e-08	53.50
IUUC-Cre-022875	Chlamydomonas reinhardtii	33.87	4.00e-07	46.60
IUUC-Csa-023947	Chlorocebus sabaeus	72.02	0.00e+00	1770.00
IUUC-Cho-024396	Choloepus hoffmanni	69.28	6.00e-110	392.00
IUUC-Dno-029714	Dasypus novemcinctus	68.30	0.00e+00	971.00
IUUC-Hsa-046200	Homo sapiens	84.26	9.00e-52	194.00
IUUC-Lpe-050939	Leersia perrieri	36.67	3.00e-08	52.00
IUUC-Mlu-067644	Myotis lucifugus	71.95	0.00e+00	1034.00
IUUC-Oan-073333	Ornithorhynchus anatinus	53.38	1.00e-42	165.00
IUUC-Oba-075008	Oryza barthii	34.48	2.00e-07	49.30
IUUC-Obr-076867	Oryza brachyantha	36.67	2.00e-08	52.80
IUUC-Ogl-077681	Oryza glaberrima	36.21	6.00e-08	51.20
IUUC-Ogu-078356	Oryza glumaepatula	36.21	6.00e-08	51.20
IUUC-Oin-079949	Oryza indica	36.21	6.00e-08	51.20
IUUC-Olo-080990	Oryza longistaminata	34.48	4.00e-06	45.10
IUUC-Ome-081618	Oryza meridionalis	36.21	6.00e-08	51.20
IUUC-Oni-082491	Oryza nivara	36.21	6.00e-08	51.20
IUUC-Opu-083979	Oryza punctata	36.21	6.00e-08	51.20
IUUC-Osa-085324	Oryza sativa	36.21	6.00e-08	51.20
IUUC-Pop-099205	Populus trichocarpa	32.79	1.00e-07	49.70
IUUC-Sit-110148	Setaria italica	35.00	2.00e-08	52.80
IUUC-Sly-111635	Solanum lycopersicum	36.07	1.00e-08	53.10
IUUC-Stu-111988	Solanum tuberosum	36.07	1.00e-08	53.10
IUUC-Sbi-114796	Sorghum bicolor	34.48	5.00e-07	48.10
IUUC-Tca-121633	Theobroma cacao	34.48	4.00e-08	51.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence