iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112797

Ensembl Protein ID

PGSC0003DMT400073836

UniProt Accession

M1CSR6; M1CSR6_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028687	PGSC0003DMT400073836	PGSC0003DMT400073836

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.90e-34	116.8	11	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++flCpIsl+lM+dPv+l++Gi+ydr++Iekw++  ++tcPvt+qpl++ d++Pn+t+r++iq+wc en++
   Q: 11   IPSHFLCPISLDLMKDPVTLCTGISYDRENIEKWIEARNSTCPVTNQPLRNFDIIPNHTIRKMIQDWCVENKN 83
           8********************************************************************9985 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKLNSCKELT IPSHFLCPIS LDLMKDPVTL CTGISYDREN IEKWIEARNS TCPVTNQPLR 60
NFDIIPNHTI RKMIQDWCVE NKNYGIERVP TPRIPIDSSQ VTEICSRLMI EAQRGNEKKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTATAGTC ACGATGATTT TTTCGTGGAG ACGTAAAAAT AAGGCTATGA AATTGAACTC 60
TTGTAAAGAA CTTACAATTC CATCTCATTT TCTTTGTCCA ATTTCTCTTG ATTTAATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006171	Arabidopsis lyrata	46.96	5.00e-94	337.00
IUUC-Ath-007692	Arabidopsis thaliana	47.07	3.00e-92	330.00
IUUC-Bol-016269	Brassica oleracea	45.92	6.00e-96	343.00
IUUC-Bra-017285	Brassica rapa	45.80	6.00e-98	349.00
IUUC-Gma-043784	Glycine max	49.28	6.00e-116	409.00
IUUC-Mtr-058526	Medicago truncatula	48.49	8.00e-103	365.00
IUUC-Pop-099425	Populus trichocarpa	54.52	2.00e-121	427.00
IUUC-Ppe-101406	Prunus persica	51.08	2.00e-127	447.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence