iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002460

Ensembl Protein ID

ERM96906

UniProt Accession

W1NMV8; W1NMV8_AMBTC

Genbank Protein ID

ERM96906.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI396637

Gene Name

AMTR_s00074p00101590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00074p00101590	ERM96906	ERM96906

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-26	90.5	558	590
E3 activity/RING/U-box	5.50e-09	36.4	54	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           gH+  v+ ++f s++ l+s+s D t+++WD+ +
   Q: 558  GHSKAVSYVKFlSTNELASASTDSTLRLWDVNE 590
           89*********9889***************966 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliq 66
           v ++flCpI +++ rd   +++G+++   +I  +l+++   cP +++ lt+++l Pn  l +l +
   Q: 54   VDKDFLCPICMQMIRDAFLTACGHSFCYMCIVTHLNNKSD-CPCCGRFLTNNQLFPNFLLNKLLK 117
           5689***********************************9.****************99987766 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAEGSLSHHS TAGGALVPSV KGEQRSGSAS APEGDEGLGV GSGPGAGAGL GVEVDKDFLC 60
PICMQMIRDA FLTACGHSFC YMCIVTHLNN KSDCPCCGRF LTNNQLFPNF LLNKLLKKTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGG GCTCTCTCTC TCATCACTCC ACGGCGGGGG GCGCGCTCGT GCCCTCGGTC 60
AAGGGCGAGC AGAGGTCTGG CTCTGCATCG GCACCGGAGG GCGATGAGGG CTTGGGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0046283--P:anthocyanin-containing compound metabolic process
GO:0006281--P:DNA repair
GO:0009649--P:entrainment of circadian clock
GO:0009640--P:photomorphogenesis
GO:0048573--P:photoperiodism, flowering
GO:0010119--P:regulation of stomatal movement
GO:0009641--P:shade avoidance

KEGG

atr:18424854

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	73.19	0.00e+00	960.00
IUUC-Aml-001265	Ailuropoda melanoleuca	39.63	2.00e-125	441.00
IUUC-Apl-003796	Anas platyrhynchos	39.07	1.00e-118	419.00
IUUC-Aca-005078	Anolis carolinensis	39.63	8.00e-126	443.00
IUUC-Aly-006014	Arabidopsis lyrata	74.22	0.00e+00	1024.00
IUUC-Ath-007636	Arabidopsis thaliana	74.22	0.00e+00	1031.00
IUUC-Ame-011176	Astyanax mexicanus	57.85	6.00e-40	157.00
IUUC-Bta-012595	Bos taurus	39.75	3.00e-126	444.00
IUUC-Bdi-014152	Brachypodium distachyon	71.66	0.00e+00	988.00
IUUC-Bol-016380	Brassica oleracea	74.00	0.00e+00	1007.00
IUUC-Bra-017690	Brassica rapa	73.16	0.00e+00	982.00
IUUC-Cja-018926	Callithrix jacchus	40.06	8.00e-127	446.00
IUUC-Cfa-021088	Canis familiaris	40.06	2.00e-127	448.00
IUUC-Cpo-022442	Cavia porcellus	39.43	6.00e-120	423.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	30.77	3.00e-34	137.00
IUUC-Csa-024119	Chlorocebus sabaeus	39.60	2.00e-125	442.00
IUUC-Cin-025375	Ciona intestinalis	39.47	8.00e-125	439.00
IUUC-Cme-027350	Cyanidioschyzon merolae	45.18	8.00e-94	337.00
IUUC-Dre-028453	Danio rerio	40.28	1.00e-126	446.00
IUUC-Dno-029887	Dasypus novemcinctus	39.85	8.00e-127	446.00
IUUC-Dor-031110	Dipodomys ordii	52.63	6.00e-92	330.00
IUUC-Ete-033016	Echinops telfairi	52.46	1.00e-91	329.00
IUUC-Eca-034403	Equus caballus	39.07	8.00e-119	419.00
IUUC-Eeu-034690	Erinaceus europaeus	52.67	1.00e-86	312.00
IUUC-Fca-036475	Felis catus	38.75	1.00e-118	419.00
IUUC-Fal-037189	Ficedula albicollis	39.57	7.00e-125	439.00
IUUC-Gmo-039245	Gadus morhua	39.91	8.00e-120	423.00
IUUC-Gga-040806	Gallus gallus	39.69	3.00e-126	444.00
IUUC-Gac-042177	Gasterosteus aculeatus	39.21	4.00e-127	447.00
IUUC-Gma-044206	Glycine max	73.41	0.00e+00	956.00
IUUC-Ggo-044430	Gorilla gorilla	36.02	8.00e-82	296.00
IUUC-Hsa-045853	Homo sapiens	39.75	4.00e-126	444.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	53.30	3.00e-71	259.00
IUUC-Lch-050420	Latimeria chalumnae	40.79	1.00e-129	455.00
IUUC-Lpe-051219	Leersia perrieri	78.04	0.00e+00	1008.00
IUUC-Loc-052728	Lepisosteus oculatus	41.26	2.00e-122	432.00
IUUC-Laf-053775	Loxodonta africana	39.78	5.00e-127	447.00
IUUC-Meu-056595	Macropus eugenii	41.09	2.00e-58	219.00
IUUC-Mtr-058555	Medicago truncatula	73.78	0.00e+00	1016.00
IUUC-Mga-059646	Meleagris gallopavo	39.04	6.00e-119	420.00
IUUC-Mmr-060990	Microcebus murinus	39.63	2.00e-125	441.00
IUUC-Mdo-062287	Monodelphis domestica	39.69	3.00e-126	444.00
IUUC-Mmu-064097	Mus musculus	39.54	7.00e-126	443.00
IUUC-Mac-065240	Musa acuminata	76.51	0.00e+00	1040.00
IUUC-Mpu-066612	Mustela putorius furo	39.07	1.00e-118	419.00
IUUC-Mlu-067967	Myotis lucifugus	38.94	3.00e-117	414.00
IUUC-Nle-069543	Nomascus leucogenys	39.75	7.00e-126	443.00
IUUC-Opr-070366	Ochotona princeps	45.41	5.00e-46	177.00
IUUC-Ont-071522	Oreochromis niloticus	39.04	6.00e-128	450.00
IUUC-Oan-073409	Ornithorhynchus anatinus	39.00	3.00e-117	414.00
IUUC-Ocu-073756	Oryctolagus cuniculus	39.78	6.00e-121	426.00
IUUC-Oba-075149	Oryza barthii	74.05	0.00e+00	1024.00
IUUC-Obr-076563	Oryza brachyantha	78.45	0.00e+00	1020.00
IUUC-Ogl-077701	Oryza glaberrima	74.38	0.00e+00	1028.00
IUUC-Ogu-078383	Oryza glumaepatula	74.38	0.00e+00	1028.00
IUUC-Oin-079965	Oryza indica	74.37	0.00e+00	944.00
IUUC-Olo-080639	Oryza longistaminata	76.04	0.00e+00	1007.00
IUUC-Ome-081821	Oryza meridionalis	78.06	0.00e+00	949.00
IUUC-Oni-082622	Oryza nivara	74.38	0.00e+00	1028.00
IUUC-Opu-083295	Oryza punctata	74.17	0.00e+00	1030.00
IUUC-Oru-084661	Oryza rufipogon	74.38	0.00e+00	1028.00
IUUC-Osa-085766	Oryza sativa	74.38	0.00e+00	1028.00
IUUC-Ola-086727	Oryzias latipes	40.03	4.00e-130	457.00
IUUC-Oga-088215	Otolemur garnettii	39.30	4.00e-121	427.00
IUUC-Oar-089880	Ovis aries	39.30	4.00e-121	427.00
IUUC-Ptr-090597	Pan troglodytes	39.75	4.00e-126	444.00
IUUC-Pan-091987	Papio anubis	39.69	4.00e-126	444.00
IUUC-Psi-094033	Pelodiscus sinensis	39.18	5.00e-121	426.00
IUUC-Pma-094587	Petromyzon marinus	40.31	6.00e-114	403.00
IUUC-Ppa-095401	Physcomitrella patens	64.84	0.00e+00	867.00
IUUC-Pfo-097388	Poecilia formosa	38.98	2.00e-128	451.00
IUUC-Pab-098029	Pongo abelii	39.75	4.00e-126	444.00
IUUC-Pop-099319	Populus trichocarpa	72.66	0.00e+00	998.00
IUUC-Pca-100846	Procavia capensis	48.33	1.00e-104	372.00
IUUC-Ppe-101250	Prunus persica	67.89	0.00e+00	908.00
IUUC-Pva-102407	Pteropus vampyrus	39.60	2.00e-122	432.00
IUUC-Rno-105312	Rattus norvegicus	39.60	9.00e-126	442.00
IUUC-Sha-106514	Sarcophilus harrisii	48.36	3.00e-100	357.00
IUUC-Smo-109418	Selaginella moellendorffii	64.71	0.00e+00	817.00
IUUC-Sit-110248	Setaria italica	76.12	0.00e+00	1008.00
IUUC-Sly-110895	Solanum lycopersicum	73.55	0.00e+00	1017.00
IUUC-Stu-112386	Solanum tuberosum	70.28	0.00e+00	961.00
IUUC-Sar-113230	Sorex araneus	43.33	1.00e-67	249.00
IUUC-Sbi-113962	Sorghum bicolor	70.50	0.00e+00	989.00
IUUC-Ssc-115987	Sus scrofa	28.41	9.00e-27	113.00
IUUC-Tgu-116471	Taeniopygia guttata	39.47	3.00e-125	441.00
IUUC-Tru-118231	Takifugu rubripes	40.74	7.00e-121	426.00
IUUC-Tsy-119415	Tarsius syrichta	38.65	2.00e-116	412.00
IUUC-Tni-120893	Tetraodon nigroviridis	40.55	6.00e-121	426.00
IUUC-Tca-121703	Theobroma cacao	79.17	0.00e+00	1012.00
IUUC-Tae-125524	Triticum aestivum	74.44	0.00e+00	989.00
IUUC-Tur-126557	Triticum urartu	73.88	0.00e+00	959.00
IUUC-Tbe-127253	Tupaia belangeri	43.61	3.00e-69	255.00
IUUC-Ttr-129100	Tursiops truncatus	39.35	1.00e-117	416.00
IUUC-Vpa-130613	Vicugna pacos	35.60	1.00e-102	365.00
IUUC-Vvi-130880	Vitis vinifera	83.64	0.00e+00	1042.00
IUUC-Xtr-132033	Xenopus tropicalis	39.42	4.00e-132	464.00
IUUC-Xma-133421	Xiphophorus maculatus	38.98	2.00e-128	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence