iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121639

Ensembl Protein ID

EOX94956

UniProt Accession

A0A061DS80; A0A061DS80_THECC

Genbank Protein ID

EOX94956.1

Protein Name

Zinc finger (C3HC4-type RING finger) family protein isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_004549

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_004549	EOX94958	EOX94958
TCM_004549	EOX94956	EOX94956
TCM_004549	EOX94959	EOX94959

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-08	34.9	157	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e ++d    +++l+CgH++h dC+ ++       +++ rCP+C
   Q: 157  CPICYEYLFDSvksTRILNCGHTMHMDCFSQM-----TMQNQYRCPIC 199
           ******9977623355677**********555.....49********* PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAGGSVSAPQ RSKDFGNLEH GCEHYKRRCK IRAPCCNKIF PCRHCHNEAA NSVSNPKDHH 60
DLVRQDVKQV ICSICNTEQE VAQVCCNCRV NMGEYFCNIC KFYDDDTTKE QFHCNDCGIC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATGTCATA AAAAGATAAC TTCTGAATTG ACTTTCACTG GAACTTAGTT GAGAATTTAA 60
CAGAATAAAA GAAAGAAAGA AAATCCCGTT ATTTTCGTGT TATTCTTTTT GTTGTTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005993	Arabidopsis lyrata	70.08	4.00e-114	403.00
IUUC-Ath-007665	Arabidopsis thaliana	69.77	2.00e-104	370.00
IUUC-Bol-015118	Brassica oleracea	65.89	1.00e-107	381.00
IUUC-Cre-022565	Chlamydomonas reinhardtii	53.36	5.00e-77	279.00
IUUC-Cho-024855	Choloepus hoffmanni	42.31	2.00e-55	207.00
IUUC-Dor-030930	Dipodomys ordii	38.67	5.00e-40	156.00
IUUC-Gma-044113	Glycine max	69.38	5.00e-108	382.00
IUUC-Itr-048684	Ictidomys tridecemlineatus	44.49	4.00e-63	233.00
IUUC-Mmr-060992	Microcebus murinus	45.82	7.00e-61	226.00
IUUC-Mlu-067798	Myotis lucifugus	42.01	6.00e-54	203.00
IUUC-Ocu-074867	Oryctolagus cuniculus	44.85	1.00e-63	235.00
IUUC-Pop-099476	Populus trichocarpa	67.04	3.00e-110	390.00
IUUC-Ppe-101925	Prunus persica	73.41	7.00e-116	408.00
IUUC-Rno-105229	Rattus norvegicus	43.01	9.00e-63	232.00
IUUC-Tni-120395	Tetraodon nigroviridis	45.53	2.00e-55	207.00
IUUC-Tbe-127598	Tupaia belangeri	54.43	7.00e-21	92.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence