iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093931

Ensembl Protein ID

ENSPSIP00000003133.1

UniProt Accession

K7F523; K7F523_PELSI

Genbank Protein ID

ENSPSIP00000003133

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01165674

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000003009.1	ENSPSIT00000003146.1	ENSPSIP00000003133.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	95.11	4.00e-171	598.00	IUUC-Hsa-046680
UBD/Other/Other	95.11	4.00e-171	598.00	IUUC-Hsa-046680
UBD/Other/Other	38.79	9.00e-52	198.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCACCGCT GGTAGGATAG CCCCCACGCC TGTCGAAACT GAAAGTCACT CTTAGAGCAA 60
AGGGGCAGGG CCCAGTGATT TCCTCCTCCC TGCTTCCCTT TCCCTCAGCA GAGGATTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pss:102452778

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.35	2.00e-65	242.00
IUUC-Aml-001398	Ailuropoda melanoleuca	95.10	1.00e-171	595.00
IUUC-Atr-002449	Amborella trichopoda	48.78	7.00e-55	206.00
IUUC-Apl-004065	Anas platyrhynchos	97.33	2.00e-147	514.00
IUUC-Aca-004973	Anolis carolinensis	93.49	1.00e-172	598.00
IUUC-Aly-005501	Arabidopsis lyrata	51.30	9.00e-66	243.00
IUUC-Ath-007324	Arabidopsis thaliana	52.61	1.00e-67	249.00
IUUC-Ago-007918	Ashbya gossypii	38.20	5.00e-54	204.00
IUUC-Acl-008362	Aspergillus clavatus	42.04	1.00e-67	250.00
IUUC-Afl-008690	Aspergillus flavus	54.17	2.00e-64	239.00
IUUC-Afu-008787	Aspergillus fumigatus	43.24	2.00e-66	245.00
IUUC-Ani-009385	Aspergillus nidulans	56.57	4.00e-57	214.00
IUUC-Ang-009709	Aspergillus niger	56.22	4.00e-64	238.00
IUUC-Aor-010240	Aspergillus oryzae	54.17	2.00e-64	239.00
IUUC-Ate-010551	Aspergillus terreus	55.56	3.00e-64	238.00
IUUC-Ame-011417	Astyanax mexicanus	89.29	4.00e-159	553.00
IUUC-Bgr-011986	Blumeria graminis	56.25	6.00e-62	230.00
IUUC-Bta-012559	Bos taurus	94.71	1.00e-124	437.00
IUUC-Bci-013767	Botrytis cinerea	56.08	4.00e-58	218.00
IUUC-Bdi-014336	Brachypodium distachyon	51.56	4.00e-65	241.00
IUUC-Bol-015824	Brassica oleracea	44.74	4.00e-66	244.00
IUUC-Bra-016732	Brassica rapa	44.41	4.00e-66	244.00
IUUC-Cel-018590	Caenorhabditis elegans	40.47	1.00e-50	192.00
IUUC-Cja-019487	Callithrix jacchus	95.44	1.00e-172	598.00
IUUC-Cfa-020497	Canis familiaris	94.79	7.00e-172	595.00
IUUC-Cpo-022150	Cavia porcellus	95.10	9.00e-172	595.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	49.78	6.00e-58	216.00
IUUC-Csa-023602	Chlorocebus sabaeus	95.11	2.00e-172	597.00
IUUC-Cin-025594	Ciona intestinalis	57.38	4.00e-93	333.00
IUUC-Csv-026040	Ciona savignyi	55.27	7.00e-95	340.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	43.32	1.00e-51	196.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	2.00e-39	156.00
IUUC-Cme-027323	Cyanidioschyzon merolae	47.47	6.00e-42	164.00
IUUC-Dre-027987	Danio rerio	87.34	7.00e-155	539.00
IUUC-Dor-030294	Dipodomys ordii	93.81	2.00e-169	587.00
IUUC-Dse-031411	Dothistroma septosporum	37.65	3.00e-58	218.00
IUUC-Dme-031798	Drosophila melanogaster	55.70	7.00e-94	336.00
IUUC-Ete-032432	Echinops telfairi	93.81	7.00e-170	588.00
IUUC-Eca-034427	Equus caballus	95.11	2.00e-172	597.00
IUUC-Eeu-034917	Erinaceus europaeus	69.38	7.00e-110	389.00
IUUC-Fca-035380	Felis catus	94.79	7.00e-172	595.00
IUUC-Fal-037659	Ficedula albicollis	98.34	1.00e-173	601.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	3.00e-21	94.00
IUUC-Fso-038111	Fusarium solani	35.09	1.00e-52	199.00
IUUC-Gmo-039298	Gadus morhua	85.76	3.00e-146	510.00
IUUC-Ggr-039771	Gaeumannomyces graminis	50.52	1.00e-55	210.00
IUUC-Gga-040313	Gallus gallus	98.05	2.00e-176	610.00
IUUC-Gac-042009	Gasterosteus aculeatus	85.16	8.00e-147	512.00
IUUC-Gma-043844	Glycine max	49.26	5.00e-68	250.00
IUUC-Ggo-044639	Gorilla gorilla	85.13	3.00e-167	580.00
IUUC-Hsa-046680	Homo sapiens	95.11	2.00e-172	597.00
IUUC-Hvu-047614	Hordeum vulgare	51.82	2.00e-65	242.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	95.10	1.00e-171	595.00
IUUC-Kpa-049136	Komagataella pastoris	36.89	2.00e-55	208.00
IUUC-Lch-050607	Latimeria chalumnae	89.40	2.00e-157	547.00
IUUC-Lpe-050726	Leersia perrieri	49.77	5.00e-61	228.00
IUUC-Loc-051848	Lepisosteus oculatus	88.67	3.00e-160	556.00
IUUC-Lma-053187	Leptosphaeria maculans	41.95	8.00e-65	240.00
IUUC-Laf-053569	Loxodonta africana	93.85	6.00e-169	585.00
IUUC-Mcc-055275	Macaca mulatta	94.79	1.00e-171	594.00
IUUC-Mor-056967	Magnaporthe oryzae	36.76	2.00e-56	212.00
IUUC-Mpo-057399	Magnaporthe poae	51.03	5.00e-56	211.00
IUUC-Mtr-058353	Medicago truncatula	50.43	2.00e-64	239.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	97.71	3.00e-148	516.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	2.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	94.79	9.00e-172	595.00
IUUC-Mdo-062831	Monodelphis domestica	96.09	9.00e-174	602.00
IUUC-Mmu-064302	Mus musculus	94.79	7.00e-171	592.00
IUUC-Mac-064745	Musa acuminata	52.44	9.00e-65	240.00
IUUC-Mpu-065922	Mustela putorius furo	94.79	2.00e-172	597.00
IUUC-Mlu-068236	Myotis lucifugus	93.85	4.00e-170	589.00
IUUC-Nfi-068417	Neosartorya fischeri	43.24	3.00e-66	245.00
IUUC-Ncr-068747	Neurospora crassa	40.38	3.00e-54	205.00
IUUC-Nle-069948	Nomascus leucogenys	84.88	1.00e-167	582.00
IUUC-Opr-070919	Ochotona princeps	80.73	6.00e-136	476.00
IUUC-Ont-071467	Oreochromis niloticus	86.73	2.00e-152	531.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	3.00e-69	253.00
IUUC-Ocu-074427	Oryctolagus cuniculus	94.46	2.00e-164	570.00
IUUC-Oba-075440	Oryza barthii	50.00	1.00e-65	243.00
IUUC-Obr-076275	Oryza brachyantha	50.69	9.00e-60	223.00
IUUC-Ogl-077237	Oryza glaberrima	50.00	1.00e-65	243.00
IUUC-Ogu-078934	Oryza glumaepatula	50.00	9.00e-66	243.00
IUUC-Oin-079475	Oryza indica	50.64	7.00e-66	243.00
IUUC-Olo-080285	Oryza longistaminata	59.64	7.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	50.21	1.00e-65	242.00
IUUC-Oni-082064	Oryza nivara	50.41	6.00e-66	243.00
IUUC-Opu-083610	Oryza punctata	51.69	2.00e-65	242.00
IUUC-Oru-084911	Oryza rufipogon	43.73	2.00e-66	245.00
IUUC-Osa-085366	Oryza sativa	50.00	1.00e-65	243.00
IUUC-Ola-086846	Oryzias latipes	75.57	5.00e-139	486.00
IUUC-Olu-087879	Ostreococcus lucimarinus	44.71	6.00e-57	214.00
IUUC-Oga-089017	Otolemur garnettii	93.85	3.00e-169	587.00
IUUC-Oar-089970	Ovis aries	90.85	3.00e-162	563.00
IUUC-Ptr-091147	Pan troglodytes	86.08	9.00e-157	545.00
IUUC-Pan-091757	Papio anubis	87.99	1.00e-153	535.00
IUUC-Pno-094775	Phaeosphaeria nodorum	51.78	2.00e-58	219.00
IUUC-Ppa-095156	Physcomitrella patens	51.34	1.00e-63	236.00
IUUC-Pfo-097295	Poecilia formosa	85.85	6.00e-152	529.00
IUUC-Pab-098537	Pongo abelii	95.11	2.00e-172	597.00
IUUC-Pop-099436	Populus trichocarpa	50.42	2.00e-66	245.00
IUUC-Pca-100631	Procavia capensis	82.90	3.00e-160	556.00
IUUC-Ppe-101259	Prunus persica	50.43	8.00e-66	243.00
IUUC-Pva-102679	Pteropus vampyrus	86.45	5.00e-153	533.00
IUUC-Pgr-103475	Puccinia graminis	45.59	6.00e-45	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	2.00e-32	132.00
IUUC-Pte-104071	Pyrenophora teres	55.03	4.00e-61	228.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	55.03	5.00e-61	228.00
IUUC-Rno-104858	Rattus norvegicus	94.14	2.00e-170	591.00
IUUC-Sce-106174	Saccharomyces cerevisiae	39.26	2.00e-54	205.00
IUUC-Sha-107075	Sarcophilus harrisii	96.08	1.00e-173	601.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	43.00	5.00e-60	224.00
IUUC-Spo-108259	Schizosaccharomyces pombe	44.87	2.00e-53	202.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	40.19	1.00e-51	196.00
IUUC-Smo-109290	Selaginella moellendorffii	53.71	1.00e-65	243.00
IUUC-Sit-109992	Setaria italica	51.49	7.00e-65	240.00
IUUC-Sly-110858	Solanum lycopersicum	51.35	3.00e-63	234.00
IUUC-Stu-112129	Solanum tuberosum	50.68	1.00e-63	236.00
IUUC-Sar-113061	Sorex araneus	94.46	7.00e-171	592.00
IUUC-Sbi-114882	Sorghum bicolor	43.61	1.00e-65	243.00
IUUC-Sre-115104	Sporisorium reilianum	47.12	1.00e-44	173.00
IUUC-Ssc-115403	Sus scrofa	94.46	5.00e-171	592.00
IUUC-Tgu-117013	Taeniopygia guttata	98.37	5.00e-176	609.00
IUUC-Tru-118307	Takifugu rubripes	87.01	5.00e-149	519.00
IUUC-Tsy-119309	Tarsius syrichta	81.69	8.00e-64	236.00
IUUC-Tni-120209	Tetraodon nigroviridis	86.41	2.00e-147	514.00
IUUC-Tca-121421	Theobroma cacao	50.43	3.00e-66	244.00
IUUC-Tre-122235	Trichoderma reesei	45.64	1.00e-51	196.00
IUUC-Tvi-122421	Trichoderma virens	45.59	2.00e-52	199.00
IUUC-Tae-124587	Triticum aestivum	51.82	9.00e-66	243.00
IUUC-Tur-126353	Triticum urartu	37.50	3.00e-25	109.00
IUUC-Tme-126918	Tuber melanosporum	53.65	4.00e-59	221.00
IUUC-Ttr-129286	Tursiops truncatus	85.46	6.00e-157	546.00
IUUC-Uma-129404	Ustilago maydis	48.17	8.00e-46	177.00
IUUC-Vda-129746	Verticillium dahliae	36.83	1.00e-53	202.00
IUUC-Vpa-130648	Vicugna pacos	63.74	6.00e-24	104.00
IUUC-Vvi-131301	Vitis vinifera	51.30	6.00e-66	243.00
IUUC-Xtr-132583	Xenopus tropicalis	92.51	9.00e-167	578.00
IUUC-Xma-133129	Xiphophorus maculatus	86.17	5.00e-152	530.00
IUUC-Yli-134515	Yarrowia lipolytica	46.04	7.00e-51	194.00
IUUC-Zma-135266	Zea mays	42.90	5.00e-65	240.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence