iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-072685

Ensembl Protein ID

ENSONIP00000016019.1

UniProt Accession

I3K4H4; I3K4H4_ORENI

Genbank Protein ID

ENSONIP00000016019

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01021059

Gene Name

upf1 (1 of many); LOC100695574

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000012729.1	ENSONIT00000016034.1	ENSONIP00000016019.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	57.95	0.00e+00	974.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MSVEAYGPSS QTLTFLDTEE AELLGADTQG SEYDFTDFTL PSQTQTQGQT QSQLDSQVNG 60
PDEGLHNGGV DDSVAKASQL LAELNFEEDE EDTYYTKDLP LHACSYCGIH DPACVVYCNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACGAGGAG CTAGGAGAAT TATGTGTATT AGTATTGCTA TTTTTAATGG ATTTCCTCAC 60
AGCGTTTCGT GACGTTGCTT TGAGACCCGG ATATAGGATC AGAGTGAGAG CTCTTCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	70.86	0.00e+00	1167.00
IUUC-Aml-002008	Ailuropoda melanoleuca	91.92	0.00e+00	2004.00
IUUC-Atr-002632	Amborella trichopoda	67.70	0.00e+00	1261.00
IUUC-Apl-003997	Anas platyrhynchos	93.93	0.00e+00	1932.00
IUUC-Aca-004322	Anolis carolinensis	31.76	3.00e-54	207.00
IUUC-Aly-006521	Arabidopsis lyrata	71.24	0.00e+00	1244.00
IUUC-Ath-007059	Arabidopsis thaliana	71.00	0.00e+00	1243.00
IUUC-Ago-007801	Ashbya gossypii	54.50	0.00e+00	961.00
IUUC-Acl-008312	Aspergillus clavatus	68.94	0.00e+00	1197.00
IUUC-Afl-008429	Aspergillus flavus	68.05	0.00e+00	1194.00
IUUC-Afu-009092	Aspergillus fumigatus	64.04	0.00e+00	1196.00
IUUC-Ani-009317	Aspergillus nidulans	68.94	0.00e+00	1196.00
IUUC-Ang-009783	Aspergillus niger	67.80	0.00e+00	1189.00
IUUC-Aor-010178	Aspergillus oryzae	68.05	0.00e+00	1194.00
IUUC-Ate-010294	Aspergillus terreus	67.19	0.00e+00	1193.00
IUUC-Ame-010774	Astyanax mexicanus	75.58	0.00e+00	1228.00
IUUC-Bgr-012293	Blumeria graminis	67.53	0.00e+00	1191.00
IUUC-Bta-012382	Bos taurus	91.93	0.00e+00	2009.00
IUUC-Bci-013937	Botrytis cinerea	67.78	0.00e+00	1185.00
IUUC-Bdi-014612	Brachypodium distachyon	72.38	0.00e+00	1254.00
IUUC-Bol-015145	Brassica oleracea	70.18	0.00e+00	1234.00
IUUC-Bra-017370	Brassica rapa	68.74	0.00e+00	1199.00
IUUC-Cel-018240	Caenorhabditis elegans	59.17	0.00e+00	998.00
IUUC-Cja-019892	Callithrix jacchus	94.47	0.00e+00	1939.00
IUUC-Cfa-020700	Canis familiaris	91.69	0.00e+00	2008.00
IUUC-Cpo-021510	Cavia porcellus	91.42	0.00e+00	2010.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	59.03	0.00e+00	988.00
IUUC-Csa-023665	Chlorocebus sabaeus	92.33	0.00e+00	2004.00
IUUC-Cin-025798	Ciona intestinalis	79.30	0.00e+00	1376.00
IUUC-Csv-025901	Ciona savignyi	73.14	0.00e+00	1607.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	65.37	0.00e+00	1161.00
IUUC-Cne-027014	Cryptococcus neoformans	62.11	0.00e+00	1195.00
IUUC-Dre-028705	Danio rerio	93.47	0.00e+00	2045.00
IUUC-Dor-030369	Dipodomys ordii	91.46	0.00e+00	1858.00
IUUC-Dme-031767	Drosophila melanogaster	72.26	0.00e+00	1390.00
IUUC-Ete-032800	Echinops telfairi	33.49	2.00e-52	201.00
IUUC-Eca-033840	Equus caballus	94.54	0.00e+00	1935.00
IUUC-Fca-035466	Felis catus	93.65	0.00e+00	1931.00
IUUC-Fal-037548	Ficedula albicollis	94.28	0.00e+00	1913.00
IUUC-Fox-038023	Fusarium oxysporum	64.07	0.00e+00	1148.00
IUUC-Gmo-039285	Gadus morhua	94.52	0.00e+00	2023.00
IUUC-Ggr-039810	Gaeumannomyces graminis	66.26	0.00e+00	1176.00
IUUC-Gga-040972	Gallus gallus	92.40	0.00e+00	2001.00
IUUC-Gac-042075	Gasterosteus aculeatus	97.40	0.00e+00	2119.00
IUUC-Gma-042713	Glycine max	71.96	0.00e+00	1288.00
IUUC-Ggo-045398	Gorilla gorilla	94.63	0.00e+00	1934.00
IUUC-Hsa-046152	Homo sapiens	92.33	0.00e+00	2004.00
IUUC-Hvu-047555	Hordeum vulgare	72.46	0.00e+00	728.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	94.23	0.00e+00	1890.00
IUUC-Kpa-049205	Komagataella pastoris	50.81	0.00e+00	787.00
IUUC-Lch-049587	Latimeria chalumnae	94.26	0.00e+00	1259.00
IUUC-Lpe-051059	Leersia perrieri	72.58	0.00e+00	1261.00
IUUC-Loc-051911	Lepisosteus oculatus	95.64	0.00e+00	2022.00
IUUC-Lma-053007	Leptosphaeria maculans	61.94	0.00e+00	1170.00
IUUC-Laf-054234	Loxodonta africana	91.23	0.00e+00	1991.00
IUUC-Mcc-054762	Macaca mulatta	92.01	0.00e+00	2005.00
IUUC-Meu-056677	Macropus eugenii	88.45	0.00e+00	825.00
IUUC-Mor-057147	Magnaporthe oryzae	66.79	0.00e+00	1168.00
IUUC-Mpo-057314	Magnaporthe poae	66.26	0.00e+00	1177.00
IUUC-Mtr-058329	Medicago truncatula	71.43	0.00e+00	1286.00
IUUC-Mla-059094	Melampsora laricipopulina	67.28	0.00e+00	682.00
IUUC-Mga-060126	Meleagris gallopavo	93.45	0.00e+00	1907.00
IUUC-Mvi-060373	Microbotryum violaceum	69.22	0.00e+00	1276.00
IUUC-Mmr-060628	Microcebus murinus	91.92	0.00e+00	2003.00
IUUC-Mdo-061858	Monodelphis domestica	94.64	0.00e+00	1938.00
IUUC-Mmu-064116	Mus musculus	92.11	0.00e+00	1998.00
IUUC-Mac-065136	Musa acuminata	61.85	0.00e+00	1253.00
IUUC-Mpu-066463	Mustela putorius furo	92.42	0.00e+00	2009.00
IUUC-Mlu-068098	Myotis lucifugus	92.21	0.00e+00	1996.00
IUUC-Nfi-068370	Neosartorya fischeri	64.15	0.00e+00	1195.00
IUUC-Ncr-068792	Neurospora crassa	64.69	0.00e+00	1165.00
IUUC-Nle-070102	Nomascus leucogenys	94.53	0.00e+00	1927.00
IUUC-Opr-070620	Ochotona princeps	87.04	0.00e+00	1763.00
IUUC-Oan-073665	Ornithorhynchus anatinus	91.32	0.00e+00	1989.00
IUUC-Ocu-074154	Oryctolagus cuniculus	33.49	1.00e-54	208.00
IUUC-Oba-075075	Oryza barthii	68.61	0.00e+00	1003.00
IUUC-Obr-076183	Oryza brachyantha	72.59	0.00e+00	1081.00
IUUC-Ogl-077691	Oryza glaberrima	73.36	0.00e+00	1259.00
IUUC-Ogu-078423	Oryza glumaepatula	73.36	0.00e+00	1257.00
IUUC-Oin-080107	Oryza indica	73.36	0.00e+00	1257.00
IUUC-Olo-080269	Oryza longistaminata	73.05	0.00e+00	1186.00
IUUC-Ome-081779	Oryza meridionalis	73.36	0.00e+00	1256.00
IUUC-Oni-082366	Oryza nivara	73.36	0.00e+00	1258.00
IUUC-Opu-083958	Oryza punctata	73.12	0.00e+00	1261.00
IUUC-Oru-084182	Oryza rufipogon	73.36	0.00e+00	1257.00
IUUC-Osa-085285	Oryza sativa	73.12	0.00e+00	1258.00
IUUC-Ola-086954	Oryzias latipes	94.36	0.00e+00	2046.00
IUUC-Olu-087685	Ostreococcus lucimarinus	57.52	0.00e+00	948.00
IUUC-Oga-088591	Otolemur garnettii	92.42	0.00e+00	2006.00
IUUC-Oar-089417	Ovis aries	90.80	0.00e+00	1868.00
IUUC-Ptr-091510	Pan troglodytes	92.86	0.00e+00	1791.00
IUUC-Pan-091886	Papio anubis	92.33	0.00e+00	2004.00
IUUC-Psi-093755	Pelodiscus sinensis	93.34	0.00e+00	1363.00
IUUC-Pma-094470	Petromyzon marinus	87.93	0.00e+00	1898.00
IUUC-Pno-094963	Phaeosphaeria nodorum	62.47	0.00e+00	1168.00
IUUC-Ppa-095479	Physcomitrella patens	72.08	0.00e+00	1291.00
IUUC-Pfo-097456	Poecilia formosa	98.09	0.00e+00	2095.00
IUUC-Pab-098075	Pongo abelii	85.41	0.00e+00	1818.00
IUUC-Pop-099557	Populus trichocarpa	62.18	0.00e+00	1283.00
IUUC-Pca-100717	Procavia capensis	98.65	5.00e-175	608.00
IUUC-Ppe-101675	Prunus persica	62.16	0.00e+00	1289.00
IUUC-Pva-103029	Pteropus vampyrus	93.14	0.00e+00	1338.00
IUUC-Pgr-103318	Puccinia graminis	63.72	0.00e+00	1218.00
IUUC-Ptt-103956	Puccinia triticina	63.90	0.00e+00	1222.00
IUUC-Pte-104399	Pyrenophora teres	62.72	0.00e+00	1181.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	62.50	0.00e+00	1179.00
IUUC-Rno-105784	Rattus norvegicus	92.11	0.00e+00	2008.00
IUUC-Sce-106206	Saccharomyces cerevisiae	57.95	0.00e+00	943.00
IUUC-Sha-106566	Sarcophilus harrisii	93.64	0.00e+00	1929.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	62.26	0.00e+00	1092.00
IUUC-Spo-108258	Schizosaccharomyces pombe	59.19	0.00e+00	1054.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	64.44	0.00e+00	1048.00
IUUC-Sit-109760	Setaria italica	72.74	0.00e+00	1253.00
IUUC-Sly-111807	Solanum lycopersicum	72.48	0.00e+00	1292.00
IUUC-Stu-112869	Solanum tuberosum	68.21	0.00e+00	1276.00
IUUC-Sar-112950	Sorex araneus	37.97	9.00e-43	169.00
IUUC-Sbi-114863	Sorghum bicolor	72.99	0.00e+00	1258.00
IUUC-Sre-115092	Sporisorium reilianum	65.93	0.00e+00	1263.00
IUUC-Tgu-117214	Taeniopygia guttata	86.81	0.00e+00	1612.00
IUUC-Tru-118386	Takifugu rubripes	89.98	0.00e+00	2000.00
IUUC-Tsy-119550	Tarsius syrichta	96.14	4.00e-161	561.00
IUUC-Tni-120212	Tetraodon nigroviridis	93.81	0.00e+00	1973.00
IUUC-Tca-121353	Theobroma cacao	71.16	0.00e+00	1283.00
IUUC-Tre-122245	Trichoderma reesei	34.48	4.00e-52	201.00
IUUC-Tvi-122452	Trichoderma virens	59.82	0.00e+00	1121.00
IUUC-Tae-123692	Triticum aestivum	72.61	0.00e+00	1252.00
IUUC-Tur-126770	Triticum urartu	60.78	0.00e+00	1068.00
IUUC-Tme-126956	Tuber melanosporum	69.02	0.00e+00	1198.00
IUUC-Tbe-127873	Tupaia belangeri	33.89	4.00e-50	193.00
IUUC-Ttr-128212	Tursiops truncatus	88.91	0.00e+00	1889.00
IUUC-Uma-129327	Ustilago maydis	70.32	0.00e+00	1256.00
IUUC-Vda-129858	Verticillium dahliae	65.53	0.00e+00	1134.00
IUUC-Vpa-130743	Vicugna pacos	33.18	1.00e-50	195.00
IUUC-Vvi-131222	Vitis vinifera	71.96	0.00e+00	1264.00
IUUC-Xtr-131800	Xenopus tropicalis	78.33	0.00e+00	1662.00
IUUC-Xma-133216	Xiphophorus maculatus	97.91	0.00e+00	2091.00
IUUC-Yli-134482	Yarrowia lipolytica	53.83	0.00e+00	890.00
IUUC-Zma-134802	Zea mays	71.87	0.00e+00	1262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence