iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000006571.1	ENSONIT00000008295.1	ENSONIP00000008290.1
ENSONIG00000006571.1	ENSONIT00000008296.1	ENSONIP00000008291.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-19	69.5	193	231
ULD/UDP/UBQ/UBQ_PIM	3.90e-26	91.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 193  YEAMLTEIMSMGYERERVVAALRASFNNPHRAVEYLLTG 231
           6889*********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl+++++++e+++++tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt++++++i+++++v+++v+k++
   Q: 1    MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGkdnFPVSGQKLIYAGKILQDDTPIKDYKIDEKNFVVVMVSKKQ 78
           99*************************************************************************987 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MQITLKTLQQ QTIQIEIDPE QTVKALKEKI EAERGKDNFP VSGQKLIYAG KILQDDTPIK 60
DYKIDEKNFV VVMVSKKQKA KPAAAASPSV SEAPKPPVQD SGSTSTAAPT TNPTPAPAPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTCGTTAA TGTTATTGTT TTGGCAGAAT TTGATATGTG CATCACATTT CAGATAATAT 60
AAACTCAATT TTACAATAGC ATTAACTTTT CTGACTTTAG CCTGTTGTAA CTCTAATTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004704	Anolis carolinensis	57.57	4.00e-82	298.00
IUUC-Ame-011342	Astyanax mexicanus	65.73	4.00e-69	254.00
IUUC-Bta-012377	Bos taurus	69.64	4.00e-66	245.00
IUUC-Cja-018946	Callithrix jacchus	69.64	1.00e-67	250.00
IUUC-Csa-023183	Chlorocebus sabaeus	69.64	2.00e-68	253.00
IUUC-Dor-030358	Dipodomys ordii	69.20	1.00e-66	247.00
IUUC-Gmo-038528	Gadus morhua	67.85	7.00e-114	403.00
IUUC-Gac-042298	Gasterosteus aculeatus	72.91	3.00e-111	395.00
IUUC-Ggo-045084	Gorilla gorilla	69.64	4.00e-68	251.00
IUUC-Hsa-046614	Homo sapiens	69.64	2.00e-68	252.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	55.90	7.00e-97	347.00
IUUC-Lch-050563	Latimeria chalumnae	52.66	9.00e-87	313.00
IUUC-Loc-051758	Lepisosteus oculatus	58.06	6.00e-82	297.00
IUUC-Lma-053328	Leptosphaeria maculans	48.65	3.00e-12	63.20
IUUC-Mcc-055860	Macaca mulatta	69.64	2.00e-68	253.00
IUUC-Meu-056459	Macropus eugenii	71.88	1.00e-74	273.00
IUUC-Mla-058961	Melampsora laricipopulina	46.92	2.00e-21	96.70
IUUC-Mga-060060	Meleagris gallopavo	44.59	1.00e-12	67.40
IUUC-Mdo-062742	Monodelphis domestica	56.40	9.00e-97	347.00
IUUC-Ola-086474	Oryzias latipes	69.41	1.00e-83	302.00
IUUC-Oar-090387	Ovis aries	69.78	2.00e-66	246.00
IUUC-Ptr-090912	Pan troglodytes	69.64	2.00e-68	252.00
IUUC-Pan-092140	Papio anubis	69.64	4.00e-68	251.00
IUUC-Psi-093347	Pelodiscus sinensis	65.31	4.00e-39	155.00
IUUC-Pno-095064	Phaeosphaeria nodorum	48.65	4.00e-14	72.40
IUUC-Pfo-096607	Poecilia formosa	77.11	1.00e-125	442.00
IUUC-Pab-097738	Pongo abelii	69.64	3.00e-68	252.00
IUUC-Pca-100348	Procavia capensis	69.20	5.00e-68	251.00
IUUC-Pva-102412	Pteropus vampyrus	69.64	8.00e-69	254.00
IUUC-Ptt-103717	Puccinia triticina	49.24	2.00e-24	106.00
IUUC-Sha-106918	Sarcophilus harrisii	70.00	3.00e-70	259.00
IUUC-Sre-114894	Sporisorium reilianum	50.75	1.00e-11	64.70
IUUC-Ssc-115460	Sus scrofa	68.70	2.00e-67	249.00
IUUC-Tru-117920	Takifugu rubripes	72.06	6.00e-90	324.00
IUUC-Tni-120493	Tetraodon nigroviridis	70.38	1.00e-119	422.00
IUUC-Xma-133647	Xiphophorus maculatus	83.46	3.00e-92	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence