iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-106032

Ensembl Protein ID

ENSRNOP00000071053.1

UniProt Accession

A0A0G2JZH9; A0A0G2JZH9_RAT

Genbank Protein ID

ENSRNOP00000071053

Protein Name

DExH-box helicase 57

Genbank Nucleotide ID

AABR07062677

Gene Name

Dhx57

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000054272.1	ENSRNOT00000090688.1	ENSRNOP00000071053.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	32.14	3.00e-117	418.00	IUUC-Spo-108229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTSENQEKVK ALLRDLQEQG ADAGSERGSS GEEEEDAPEG AAEQSWSAGP EPTFLPDCRP 60
WEYIGPEEVE PPLPEFTVSP LAVQKLSRYG FHTEHCQLAL RICEGDLGAA LEHLLHQCFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTAGGAAAA CACTCTCTCT ATTTGATGTC ATCTGCTGTC GGTGTGTGTC GTGAGTATTT 60
GGGAGCTCTG ATAAGAGTAT CAAAGTTTTG TTCATGAGCA TGTGACTTTA ATTCAGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011545--DEAD/DEAH_box_helicase_dom
IPR011709--DUF1605
IPR007502--Helicase-assoc_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR006575--RWD-domain
IPR015940--UBA
IPR009060--UBA-like
IPR016135--UBQ-conjugating_enzyme/RWD
IPR000571--Znf_CCCH

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50030--UBA
PS50103--ZF_C3H1

Pfam

PF00270--DEAD
PF04408--HA2
PF00271--Helicase_C
PF07717--OB_NTP_bind
PF05773--RWD
PF00642--zf-CCCH

SMART

SM00487--DEXDc
SM00847--HA2
SM00490--HELICc
SM00165--UBA
SM00356--ZnF_C3H1

Gene Ontology

GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0046872--F:metal ion binding
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001779	Ailuropoda melanoleuca	43.44	2.00e-169	590.00
IUUC-Apl-003596	Anas platyrhynchos	72.17	0.00e+00	1834.00
IUUC-Ago-007773	Ashbya gossypii	30.89	3.00e-109	390.00
IUUC-Acl-008083	Aspergillus clavatus	36.29	4.00e-124	439.00
IUUC-Afl-008510	Aspergillus flavus	37.43	2.00e-139	490.00
IUUC-Afu-008922	Aspergillus fumigatus	36.23	3.00e-125	443.00
IUUC-Ani-009411	Aspergillus nidulans	36.61	4.00e-119	423.00
IUUC-Ang-009730	Aspergillus niger	36.71	4.00e-121	429.00
IUUC-Aor-010172	Aspergillus oryzae	37.43	3.00e-139	489.00
IUUC-Ate-010493	Aspergillus terreus	35.86	4.00e-123	436.00
IUUC-Ame-011169	Astyanax mexicanus	70.07	0.00e+00	1300.00
IUUC-Bgr-011983	Blumeria graminis	35.97	3.00e-128	453.00
IUUC-Bta-013378	Bos taurus	43.44	2.00e-165	576.00
IUUC-Bci-013754	Botrytis cinerea	35.33	3.00e-124	440.00
IUUC-Bol-016139	Brassica oleracea	41.13	2.00e-158	553.00
IUUC-Bra-016816	Brassica rapa	41.03	2.00e-158	553.00
IUUC-Cja-019540	Callithrix jacchus	43.44	5.00e-170	591.00
IUUC-Cfa-020791	Canis familiaris	41.58	7.00e-170	591.00
IUUC-Csa-024273	Chlorocebus sabaeus	43.56	4.00e-170	592.00
IUUC-Cho-024970	Choloepus hoffmanni	39.21	1.00e-151	530.00
IUUC-Cin-025138	Ciona intestinalis	47.29	4.00e-80	291.00
IUUC-Cgl-026747	Colletotrichum gloeosporioides	35.40	2.00e-86	314.00
IUUC-Cne-026991	Cryptococcus neoformans	33.95	6.00e-136	478.00
IUUC-Dre-028088	Danio rerio	60.76	0.00e+00	1473.00
IUUC-Dno-029278	Dasypus novemcinctus	86.16	0.00e+00	2200.00
IUUC-Dor-030468	Dipodomys ordii	41.62	2.00e-161	563.00
IUUC-Dse-031349	Dothistroma septosporum	34.35	2.00e-128	454.00
IUUC-Dme-031899	Drosophila melanogaster	36.05	1.00e-123	437.00
IUUC-Eca-033631	Equus caballus	41.80	1.00e-168	587.00
IUUC-Eeu-035300	Erinaceus europaeus	42.42	4.00e-168	585.00
IUUC-Fca-036139	Felis catus	43.09	2.00e-168	586.00
IUUC-Fal-036635	Ficedula albicollis	71.00	0.00e+00	1763.00
IUUC-Fox-037919	Fusarium oxysporum	35.14	8.00e-138	485.00
IUUC-Fso-038325	Fusarium solani	36.30	6.00e-88	319.00
IUUC-Gmo-038845	Gadus morhua	69.08	0.00e+00	1248.00
IUUC-Ggr-039898	Gaeumannomyces graminis	35.93	3.00e-62	233.00
IUUC-Gga-040352	Gallus gallus	40.87	1.00e-165	577.00
IUUC-Hsa-045800	Homo sapiens	43.09	3.00e-168	586.00
IUUC-Itr-047998	Ictidomys tridecemlineatus	43.11	2.00e-168	586.00
IUUC-Kpa-049373	Komagataella pastoris	30.36	2.00e-65	244.00
IUUC-Lch-050113	Latimeria chalumnae	42.51	3.00e-162	565.00
IUUC-Lma-053050	Leptosphaeria maculans	33.21	2.00e-79	291.00
IUUC-Mcc-055887	Macaca mulatta	43.44	1.00e-169	590.00
IUUC-Mor-057213	Magnaporthe oryzae	34.21	9.00e-128	451.00
IUUC-Mga-059508	Meleagris gallopavo	41.31	1.00e-163	570.00
IUUC-Mvi-060345	Microbotryum violaceum	34.65	5.00e-129	456.00
IUUC-Mmr-061784	Microcebus murinus	43.44	1.00e-170	593.00
IUUC-Mdo-062130	Monodelphis domestica	76.75	0.00e+00	1941.00
IUUC-Mmu-064388	Mus musculus	96.71	0.00e+00	2402.00
IUUC-Mpu-066129	Mustela putorius furo	43.21	2.00e-168	587.00
IUUC-Mlu-068060	Myotis lucifugus	85.14	0.00e+00	2182.00
IUUC-Nfi-068341	Neosartorya fischeri	34.86	9.00e-118	418.00
IUUC-Ncr-068804	Neurospora crassa	37.45	3.00e-82	300.00
IUUC-Nle-069904	Nomascus leucogenys	43.26	2.00e-168	586.00
IUUC-Oan-072940	Ornithorhynchus anatinus	42.11	1.00e-162	567.00
IUUC-Ocu-074808	Oryctolagus cuniculus	43.46	4.00e-169	588.00
IUUC-Ola-087195	Oryzias latipes	41.26	9.00e-171	593.00
IUUC-Olu-087596	Ostreococcus lucimarinus	42.92	2.00e-179	622.00
IUUC-Oga-088185	Otolemur garnettii	43.01	1.00e-168	587.00
IUUC-Oar-089378	Ovis aries	43.56	1.00e-170	594.00
IUUC-Ptr-091400	Pan troglodytes	43.09	6.00e-168	585.00
IUUC-Pan-092750	Papio anubis	43.44	2.00e-169	589.00
IUUC-Psi-093597	Pelodiscus sinensis	76.45	0.00e+00	1853.00
IUUC-Pno-094951	Phaeosphaeria nodorum	32.57	6.00e-65	243.00
IUUC-Pfo-097056	Poecilia formosa	42.68	9.00e-168	584.00
IUUC-Pab-098729	Pongo abelii	85.30	0.00e+00	2142.00
IUUC-Ppe-102067	Prunus persica	40.75	1.00e-166	580.00
IUUC-Pva-102886	Pteropus vampyrus	47.88	4.00e-79	289.00
IUUC-Pgr-103316	Puccinia graminis	34.27	6.00e-98	353.00
IUUC-Ptt-103877	Puccinia triticina	32.00	2.00e-88	321.00
IUUC-Pte-104049	Pyrenophora teres	34.55	4.00e-78	287.00
IUUC-Pyt-104735	Pyrenophora triticirepentis	34.94	2.00e-77	284.00
IUUC-Sce-106450	Saccharomyces cerevisiae	28.21	3.00e-55	211.00
IUUC-Sha-106606	Sarcophilus harrisii	40.13	4.00e-171	595.00
IUUC-Sja-107784	Schizosaccharomyces japonicus	34.12	7.00e-121	429.00
IUUC-Spo-108229	Schizosaccharomyces pombe	32.14	2.00e-110	394.00
IUUC-Smo-109377	Selaginella moellendorffii	41.16	2.00e-100	360.00
IUUC-Sre-115121	Sporisorium reilianum	34.73	6.00e-125	442.00
IUUC-Tgu-117294	Taeniopygia guttata	42.49	1.00e-164	573.00
IUUC-Tru-118378	Takifugu rubripes	69.54	0.00e+00	1184.00
IUUC-Tsy-119563	Tarsius syrichta	40.53	4.00e-162	565.00
IUUC-Tni-120568	Tetraodon nigroviridis	41.25	1.00e-159	557.00
IUUC-Tca-121301	Theobroma cacao	38.06	8.00e-107	381.00
IUUC-Tre-122120	Trichoderma reesei	36.68	5.00e-89	323.00
IUUC-Tvi-122632	Trichoderma virens	36.33	2.00e-89	324.00
IUUC-Tme-127179	Tuber melanosporum	28.62	9.00e-57	216.00
IUUC-Tbe-127844	Tupaia belangeri	41.33	6.00e-155	541.00
IUUC-Ttr-128592	Tursiops truncatus	42.62	1.00e-166	580.00
IUUC-Uma-129440	Ustilago maydis	34.25	8.00e-121	429.00
IUUC-Vda-129765	Verticillium dahliae	34.33	2.00e-131	464.00
IUUC-Vpa-130460	Vicugna pacos	41.31	2.00e-161	563.00
IUUC-Vvi-131000	Vitis vinifera	42.26	3.00e-165	575.00
IUUC-Xtr-132421	Xenopus tropicalis	41.21	1.00e-165	577.00
IUUC-Xma-134305	Xiphophorus maculatus	42.15	8.00e-164	571.00
IUUC-Yli-134558	Yarrowia lipolytica	32.97	3.00e-77	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence