iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057811

Ensembl Protein ID

AES99821

UniProt Accession

G7KH78; A0A0C3XS33; G7KH78_MEDTR

Genbank Protein ID

AES99821.2

Protein Name

RNA polymerase II transcription factor SIII (Elongin) subunit A

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g085090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g085090	AES99821	AES99821

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	31.65	7.00e-05	42.40	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	31.65	7.00e-05	42.40	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MMRRDEISAR KKPSLFQRNP VMMKRKDQTS LVDLCVEKAI DNVKYLGDVS HVDHHMLERI 60
LPHCTLDQLM HIEKASEGMD LSPITDKLWK KFFEKQFGIN CTNEVVKKMK EKRVSFTWLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGAGAA GGGATGAAAT ATCTGCAAGA AAGAAGCCAT CGTTGTTTCA AAGGAATCCT 60
GTTATGATGA AGAGAAAGGA TCAAACATCT TTGGTTGATC TTTGTGTTGA GAAAGCTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

mtr:MTR_5g085090

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	30.88	2.00e-02	33.90
IUUC-Apl-003659	Anas platyrhynchos	27.18	2.20e-02	33.90
IUUC-Aca-004513	Anolis carolinensis	26.47	7.00e-04	38.90
IUUC-Ago-007835	Ashbya gossypii	24.49	2.00e-05	42.70
IUUC-Acl-008085	Aspergillus clavatus	43.75	1.00e-02	33.90
IUUC-Afu-008931	Aspergillus fumigatus	42.42	6.00e-03	34.70
IUUC-Ani-009161	Aspergillus nidulans	28.99	2.20e-02	32.30
IUUC-Ang-009875	Aspergillus niger	37.50	2.80e-01	28.90
IUUC-Ame-011668	Astyanax mexicanus	29.41	2.00e-03	37.00
IUUC-Bci-014000	Botrytis cinerea	27.66	9.40e-02	30.80
IUUC-Bdi-014527	Brachypodium distachyon	48.41	1.00e-32	132.00
IUUC-Bol-016438	Brassica oleracea	55.45	1.00e-52	199.00
IUUC-Bra-017526	Brassica rapa	54.98	2.00e-51	196.00
IUUC-Cel-018281	Caenorhabditis elegans	24.24	3.00e-06	45.80
IUUC-Cja-018759	Callithrix jacchus	32.35	1.40e-02	34.70
IUUC-Cfa-020766	Canis familiaris	32.35	1.20e-02	34.70
IUUC-Cpo-022250	Cavia porcellus	30.88	9.00e-03	35.00
IUUC-Csa-023293	Chlorocebus sabaeus	32.35	4.00e-03	36.60
IUUC-Cne-026936	Cryptococcus neoformans	21.90	5.00e-04	38.50
IUUC-Dre-027828	Danio rerio	28.57	1.00e-06	47.40
IUUC-Dse-031436	Dothistroma septosporum	24.19	5.10e-02	31.60
IUUC-Dme-031809	Drosophila melanogaster	25.74	3.50e-01	29.60
IUUC-Ete-032677	Echinops telfairi	26.47	8.00e-04	38.50
IUUC-Eca-034045	Equus caballus	29.41	2.00e-04	40.00
IUUC-Eeu-035063	Erinaceus europaeus	33.82	1.00e-03	37.70
IUUC-Fca-036488	Felis catus	32.35	3.00e-03	36.60
IUUC-Fal-037501	Ficedula albicollis	27.00	7.00e-03	35.80
IUUC-Gmo-038614	Gadus morhua	26.67	6.00e-03	35.40
IUUC-Gga-040738	Gallus gallus	26.36	2.70e-02	33.50
IUUC-Gac-041381	Gasterosteus aculeatus	23.53	5.40e-02	32.30
IUUC-Gma-042964	Glycine max	64.49	9.00e-77	278.00
IUUC-Ggo-045139	Gorilla gorilla	32.35	4.00e-03	36.60
IUUC-Hsa-046083	Homo sapiens	32.35	4.00e-03	36.60
IUUC-Itr-048970	Ictidomys tridecemlineatus	32.35	2.00e-03	37.00
IUUC-Kpa-049376	Komagataella pastoris	28.07	2.00e-08	52.40
IUUC-Lch-050369	Latimeria chalumnae	27.84	1.00e-03	37.70
IUUC-Lpe-050727	Leersia perrieri	42.97	4.00e-29	121.00
IUUC-Loc-052347	Lepisosteus oculatus	30.43	6.00e-04	38.90
IUUC-Laf-053575	Loxodonta africana	32.35	3.00e-03	37.00
IUUC-Mcc-054823	Macaca mulatta	32.35	4.00e-03	36.60
IUUC-Meu-056878	Macropus eugenii	26.88	1.80e-02	33.50
IUUC-Mga-059445	Meleagris gallopavo	26.36	2.40e-02	33.90
IUUC-Mmr-060665	Microcebus murinus	32.35	3.00e-03	36.60
IUUC-Mdo-062430	Monodelphis domestica	27.68	4.00e-04	39.70
IUUC-Mmu-064173	Mus musculus	32.35	4.00e-03	36.60
IUUC-Mac-065364	Musa acuminata	47.21	2.00e-54	204.00
IUUC-Mpu-066344	Mustela putorius furo	32.35	3.00e-03	36.60
IUUC-Mlu-068101	Myotis lucifugus	32.05	4.00e-03	36.60
IUUC-Nfi-068489	Neosartorya fischeri	42.42	6.00e-03	34.70
IUUC-Opr-070498	Ochotona princeps	28.41	2.20e-02	33.10
IUUC-Ont-071579	Oreochromis niloticus	26.47	2.00e-03	37.40
IUUC-Oan-072862	Ornithorhynchus anatinus	29.41	2.60e-02	33.50
IUUC-Ocu-073882	Oryctolagus cuniculus	30.88	4.00e-03	36.20
IUUC-Oba-075710	Oryza barthii	41.60	9.00e-28	116.00
IUUC-Ogl-077171	Oryza glaberrima	44.64	5.00e-31	127.00
IUUC-Ogu-078827	Oryza glumaepatula	44.05	3.00e-30	125.00
IUUC-Oin-080204	Oryza indica	41.60	1.00e-27	116.00
IUUC-Olo-081049	Oryza longistaminata	41.60	2.00e-27	115.00
IUUC-Ome-081128	Oryza meridionalis	42.24	1.00e-24	105.00
IUUC-Oni-083077	Oryza nivara	41.60	7.00e-28	116.00
IUUC-Opu-083270	Oryza punctata	40.00	3.00e-26	111.00
IUUC-Oru-084299	Oryza rufipogon	42.24	1.00e-24	105.00
IUUC-Osa-085671	Oryza sativa	42.57	1.00e-22	97.40
IUUC-Ola-086456	Oryzias latipes	27.94	5.00e-04	39.30
IUUC-Oga-087918	Otolemur garnettii	30.88	5.00e-03	36.20
IUUC-Oar-089663	Ovis aries	25.49	1.00e-03	38.10
IUUC-Ptr-091033	Pan troglodytes	32.35	4.00e-03	36.60
IUUC-Pan-092277	Papio anubis	32.35	4.00e-03	36.60
IUUC-Psi-094086	Pelodiscus sinensis	27.68	7.00e-04	38.90
IUUC-Pma-094683	Petromyzon marinus	27.78	1.10e-01	30.00
IUUC-Pfo-097334	Poecilia formosa	26.47	1.00e-03	37.70
IUUC-Pab-098345	Pongo abelii	32.35	4.00e-03	36.20
IUUC-Pop-099683	Populus trichocarpa	64.71	7.00e-45	171.00
IUUC-Pca-100737	Procavia capensis	30.77	1.20e-02	34.70
IUUC-Pva-102497	Pteropus vampyrus	30.88	1.70e-02	34.30
IUUC-Pgr-103464	Puccinia graminis	27.54	2.00e-03	34.30
IUUC-Rno-105177	Rattus norvegicus	32.35	2.00e-03	37.00
IUUC-Sce-106376	Saccharomyces cerevisiae	31.65	3.00e-05	42.00
IUUC-Sha-106480	Sarcophilus harrisii	27.68	3.00e-04	40.00
IUUC-Sja-107782	Schizosaccharomyces japonicus	25.45	2.00e-07	48.90
IUUC-Sit-109960	Setaria italica	46.67	9.00e-36	142.00
IUUC-Sar-113255	Sorex araneus	32.05	5.00e-03	35.80
IUUC-Sbi-114855	Sorghum bicolor	45.45	2.00e-32	131.00
IUUC-Sre-115076	Sporisorium reilianum	25.76	1.00e-07	51.20
IUUC-Ssc-115875	Sus scrofa	25.49	2.00e-03	37.70
IUUC-Tgu-117066	Taeniopygia guttata	27.00	6.00e-03	35.80
IUUC-Tru-117881	Takifugu rubripes	26.47	5.00e-04	38.90
IUUC-Tni-120325	Tetraodon nigroviridis	24.73	2.00e-04	40.40
IUUC-Tae-122727	Triticum aestivum	45.59	1.00e-29	122.00
IUUC-Tur-126506	Triticum urartu	43.97	1.00e-25	108.00
IUUC-Tbe-127648	Tupaia belangeri	32.05	4.00e-03	36.20
IUUC-Ttr-129287	Tursiops truncatus	26.79	1.00e-03	38.10
IUUC-Uma-129543	Ustilago maydis	24.00	1.00e-06	48.10
IUUC-Vpa-130645	Vicugna pacos	26.47	2.00e-03	37.40
IUUC-Xtr-132709	Xenopus tropicalis	28.00	2.00e-04	40.80
IUUC-Xma-133858	Xiphophorus maculatus	26.47	1.00e-03	37.70
IUUC-Yli-134386	Yarrowia lipolytica	24.60	2.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence