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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105177
Ensembl Protein ID ENSRNOP00000059109.1
UniProt Accession Q66HK4; Q66HK4_RAT
Genbank Protein ID AAH81815.1; EDL80794.1
Protein Name Tceb3 protein; Transcription elongation factor B (SIII), polypeptide 3
Genbank Nucleotide ID AC133821; CH473968
Gene Name Tceb3; Eloa; rCG_31125
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000010902.6 ENSRNOT00000064596.2 ENSRNOP00000059109.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/SCF/F-box 33.82 2.00e-05 46.20 IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box 33.82 2.00e-05 46.20 IUUC-Sce-106376
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MAAESALQVV EKLQARLAAN PDPKKLLKYL KKLSVLPITV DILVETGVGK TVNSFRKHEQ 60
VGNFARDLVA QWKKLVPVER NNEAEDQDFE KSNSRKRPRD VPQQEEEAEG NYQESWQASG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105177|E3,F-box;E3,SOCS|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAGGGCGGAG TTGCGGCCCG AGGACGCTAC GCGAGCCCAG TTCCGGCGAG GAGGCCGCGC 60
CAGTGACAGC GATGGCGGCG GAGTCGGCGC TCCAAGTTGT GGAGAAGCTG CAGGCGCGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105177|E3,F-box;E3,SOCS|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0251--Elongation factor
KW-0539--Nucleus
KW-0648--Protein biosynthesis
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR001810--F-box_dom
IPR010684--RNA_pol_II_trans_fac_SIII_A
IPR003617--TFIIS/CRSP70_N_sub
IPR017923--TFIIS_N
PROSITE

PS50181--FBOX
PS51319--TFIIS_N
Pfam

PF06881--Elongin_A
PF08711--Med26
SMART

SM00509--TFS2N
Gene Ontology

GO:0005615--C:extracellular space
GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0003746--F:translation elongation factor activity
GO:0006355--P:regulation of transcription, DNA-templated
KEGG rno:25562
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001705 Ailuropoda melanoleuca 80.89 0.00e+00 1061.00
IUUC-Apl-003659 Anas platyrhynchos 75.99 8.00e-130 457.00
IUUC-Aca-004513 Anolis carolinensis 54.83 0.00e+00 662.00
IUUC-Ago-007835 Ashbya gossypii 27.27 9.00e-06 44.30
IUUC-Acl-008085 Aspergillus clavatus 26.72 3.00e-07 49.70
IUUC-Afu-008931 Aspergillus fumigatus 27.59 3.00e-07 49.70
IUUC-Ani-009161 Aspergillus nidulans 23.70 2.00e-08 52.80
IUUC-Ang-009875 Aspergillus niger 26.32 2.00e-05 43.50
IUUC-Ame-011668 Astyanax mexicanus 60.94 2.00e-85 310.00
IUUC-Bta-013219 Bos taurus 75.51 0.00e+00 983.00
IUUC-Bci-014000 Botrytis cinerea 23.29 4.00e-07 49.30
IUUC-Bdi-014527 Brachypodium distachyon 38.03 2.00e-09 56.20
IUUC-Bol-016438 Brassica oleracea 32.26 1.00e-08 54.30
IUUC-Bra-017526 Brassica rapa 32.26 1.00e-08 54.30
IUUC-Cel-018281 Caenorhabditis elegans 32.45 3.00e-15 76.30
IUUC-Cja-018759 Callithrix jacchus 81.08 0.00e+00 1120.00
IUUC-Cfa-020766 Canis familiaris 77.69 0.00e+00 1010.00
IUUC-Cpo-022250 Cavia porcellus 78.03 0.00e+00 995.00
IUUC-Csa-023293 Chlorocebus sabaeus 81.85 0.00e+00 1138.00
IUUC-Cin-025556 Ciona intestinalis 39.20 1.00e-48 187.00
IUUC-Csv-026153 Ciona savignyi 40.00 4.00e-39 154.00
IUUC-Cgl-026733 Colletotrichum gloeosporioides 27.08 7.00e-04 38.50
IUUC-Cne-026936 Cryptococcus neoformans 26.47 3.00e-05 43.50
IUUC-Dre-027828 Danio rerio 44.56 3.00e-78 286.00
IUUC-Dse-031436 Dothistroma septosporum 30.95 1.00e-04 41.20
IUUC-Dme-031809 Drosophila melanogaster 32.89 1.00e-40 160.00
IUUC-Ete-032677 Echinops telfairi 87.89 2.00e-147 516.00
IUUC-Eca-034045 Equus caballus 74.71 6.00e-112 397.00
IUUC-Eeu-035063 Erinaceus europaeus 84.33 8.00e-169 587.00
IUUC-Fca-036488 Felis catus 80.22 0.00e+00 1041.00
IUUC-Fal-037501 Ficedula albicollis 57.14 0.00e+00 647.00
IUUC-Fso-038123 Fusarium solani 31.18 2.00e-04 40.00
IUUC-Gmo-038614 Gadus morhua 68.78 6.00e-77 281.00
IUUC-Ggr-039793 Gaeumannomyces graminis 36.25 3.00e-08 52.80
IUUC-Gga-040738 Gallus gallus 57.52 0.00e+00 704.00
IUUC-Gac-041381 Gasterosteus aculeatus 53.21 1.00e-97 350.00
IUUC-Gma-042964 Glycine max 30.88 2.00e-04 38.90
IUUC-Ggo-045139 Gorilla gorilla 81.85 0.00e+00 1134.00
IUUC-Hsa-046083 Homo sapiens 81.72 0.00e+00 1138.00
IUUC-Itr-048970 Ictidomys tridecemlineatus 81.81 0.00e+00 1043.00
IUUC-Kpa-049376 Komagataella pastoris 38.10 1.00e-05 43.90
IUUC-Lch-050369 Latimeria chalumnae 65.06 1.00e-67 251.00
IUUC-Lpe-050727 Leersia perrieri 32.86 9.00e-07 47.80
IUUC-Loc-052347 Lepisosteus oculatus 57.51 2.00e-73 270.00
IUUC-Lma-053027 Leptosphaeria maculans 22.32 2.80e-01 29.30
IUUC-Laf-053575 Loxodonta africana 82.65 0.00e+00 1118.00
IUUC-Mcc-054823 Macaca mulatta 80.91 0.00e+00 1079.00
IUUC-Meu-056878 Macropus eugenii 39.94 5.00e-95 341.00
IUUC-Mor-056948 Magnaporthe oryzae 31.87 4.00e-07 48.90
IUUC-Mtr-057811 Medicago truncatula 25.49 6.00e-04 37.40
IUUC-Mla-058917 Melampsora laricipopulina 36.62 5.00e-11 62.00
IUUC-Mga-059445 Meleagris gallopavo 57.61 0.00e+00 676.00
IUUC-Mmr-060665 Microcebus murinus 79.13 0.00e+00 1070.00
IUUC-Mdo-062430 Monodelphis domestica 63.65 0.00e+00 771.00
IUUC-Mmu-064173 Mus musculus 92.76 0.00e+00 1206.00
IUUC-Mac-065364 Musa acuminata 33.80 1.00e-04 39.70
IUUC-Mpu-066344 Mustela putorius furo 78.49 0.00e+00 1011.00
IUUC-Mlu-068101 Myotis lucifugus 81.64 0.00e+00 1106.00
IUUC-Nfi-068489 Neosartorya fischeri 27.59 1.00e-07 50.80
IUUC-Opr-070498 Ochotona princeps 47.03 1.00e-45 177.00
IUUC-Ont-071579 Oreochromis niloticus 53.44 2.00e-88 320.00
IUUC-Oan-072862 Ornithorhynchus anatinus 56.65 0.00e+00 673.00
IUUC-Ocu-073882 Oryctolagus cuniculus 73.55 0.00e+00 847.00
IUUC-Oba-075710 Oryza barthii 35.21 2.00e-07 49.70
IUUC-Ogl-077171 Oryza glaberrima 35.21 2.00e-07 49.30
IUUC-Ogu-078827 Oryza glumaepatula 35.21 4.00e-07 48.90
IUUC-Oin-080204 Oryza indica 35.21 2.00e-07 49.30
IUUC-Olo-081049 Oryza longistaminata 35.21 3.00e-07 49.30
IUUC-Ome-081128 Oryza meridionalis 35.21 5.00e-06 43.90
IUUC-Oni-083077 Oryza nivara 35.21 1.00e-07 50.10
IUUC-Opu-083270 Oryza punctata 33.80 2.00e-06 46.60
IUUC-Oru-084299 Oryza rufipogon 35.21 5.00e-06 43.90
IUUC-Osa-085671 Oryza sativa 33.77 1.00e-06 44.30
IUUC-Ola-086456 Oryzias latipes 63.19 2.00e-92 333.00
IUUC-Oga-087918 Otolemur garnettii 81.97 0.00e+00 1089.00
IUUC-Oar-089663 Ovis aries 76.55 0.00e+00 982.00
IUUC-Ptr-091033 Pan troglodytes 81.11 0.00e+00 1098.00
IUUC-Pan-092277 Papio anubis 81.08 0.00e+00 1139.00
IUUC-Psi-094086 Pelodiscus sinensis 55.61 0.00e+00 692.00
IUUC-Pma-094683 Petromyzon marinus 50.18 1.00e-59 223.00
IUUC-Pno-094930 Phaeosphaeria nodorum 34.38 2.00e-09 56.20
IUUC-Pfo-097334 Poecilia formosa 59.74 1.00e-87 317.00
IUUC-Pab-098345 Pongo abelii 81.77 0.00e+00 1096.00
IUUC-Pop-099683 Populus trichocarpa 31.43 4.00e-04 37.00
IUUC-Pca-100737 Procavia capensis 78.43 0.00e+00 1066.00
IUUC-Pva-102497 Pteropus vampyrus 82.16 0.00e+00 1155.00
IUUC-Pgr-103464 Puccinia graminis 36.62 2.00e-11 61.60
IUUC-Pte-104288 Pyrenophora teres 29.79 3.00e-07 49.30
IUUC-Pyt-104772 Pyrenophora triticirepentis 28.72 6.00e-07 48.10
IUUC-Sce-106376 Saccharomyces cerevisiae 31.71 5.00e-07 48.90
IUUC-Sha-106480 Sarcophilus harrisii 65.87 0.00e+00 828.00
IUUC-Sja-107782 Schizosaccharomyces japonicus 27.41 6.00e-13 67.40
IUUC-Spo-108157 Schizosaccharomyces pombe 29.17 7.00e-11 60.10
IUUC-Sit-109960 Setaria italica 25.84 2.00e-04 38.90
IUUC-Sar-113255 Sorex araneus 69.88 0.00e+00 770.00
IUUC-Sbi-114855 Sorghum bicolor 38.03 3.00e-06 45.80
IUUC-Sre-115076 Sporisorium reilianum 37.00 6.00e-17 82.40
IUUC-Ssc-115875 Sus scrofa 79.64 0.00e+00 1081.00
IUUC-Tgu-117066 Taeniopygia guttata 54.99 2.00e-175 609.00
IUUC-Tru-117881 Takifugu rubripes 56.69 5.00e-93 335.00
IUUC-Tsy-119531 Tarsius syrichta 76.42 0.00e+00 1023.00
IUUC-Tni-120325 Tetraodon nigroviridis 39.53 2.00e-120 426.00
IUUC-Tae-122727 Triticum aestivum 30.77 1.00e-09 57.00
IUUC-Tur-126506 Triticum urartu 31.62 3.00e-08 52.00
IUUC-Tbe-127648 Tupaia belangeri 74.66 0.00e+00 951.00
IUUC-Ttr-129287 Tursiops truncatus 79.41 0.00e+00 1046.00
IUUC-Uma-129543 Ustilago maydis 33.64 3.00e-14 73.90
IUUC-Vpa-130645 Vicugna pacos 76.54 0.00e+00 995.00
IUUC-Xtr-132709 Xenopus tropicalis 56.61 1.00e-123 437.00
IUUC-Xma-133858 Xiphophorus maculatus 61.18 5.00e-89 322.00
IUUC-Yli-134386 Yarrowia lipolytica 32.14 4.00e-09 55.50
IUUC-Zma-135412 Zea mays 29.47 4.00e-06 44.70
Created Date 25-Jun-2017

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