iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027790

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 55a

Genbank Nucleotide ID

BX324211

Gene Name

trim55a; trim55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000029596.7	ENSDART00000047055.6	ENSDARP00000047054.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-09	38.9	25	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle f +++++lpC+H  +++C + +            g++  s ++frCP Cr
   Q: 25   CPICLEIFTKPVVILPCQHNLCRKCANDIfqasnpylptrGGSSLGSGGRFRCPSCR 81
           *************************86666777888****9***************8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSVTLDYCLS RSRDTMESLE RQLICPICLE IFTKPVVILP CQHNLCRKCA NDIFQASNPY 60
LPTRGGSSLG SGGRFRCPSC RHEVVLDRHG VYGLQRNLLV ENIIDMYKQE SSSSKPEPQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTACTTTTTC TAAAAACAGA CCGGACACTA CACGAGTGCG TGGAGGAAGG TGACGACGCG 60
TTTTACCGTT CATGTTGTAT AAGTTCCACA GCACGGGAAA CAGCATTTCT TTAATAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

dre:436631

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010795	Astyanax mexicanus	68.27	2.00e-152	532.00
IUUC-Cgl-026521	Colletotrichum gloeosporioides	32.58	1.00e-07	52.80
IUUC-Gac-041427	Gasterosteus aculeatus	59.08	3.00e-140	491.00
IUUC-Mor-056977	Magnaporthe oryzae	27.62	9.00e-07	49.70
IUUC-Ont-071449	Oreochromis niloticus	74.05	6.00e-136	477.00
IUUC-Ola-086646	Oryzias latipes	69.79	2.00e-138	485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence