iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044168

UUCD1 version

UUC-GlM-01334

Ensembl Protein ID

GLYMA20G31330.4

UniProt Accession

I1NH84; I1NH84_SOYBN

Genbank Protein ID

KRG91764.1; KRG91765.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853; CM000853

Gene Name

LOC100790414; GLYMA_20G173100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G31330	GLYMA20G31330.4	GLYMA20G31330.4
GLYMA20G31330	GLYMA20G31330.2	GLYMA20G31330.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-42	141.1	316	353
UBD/Beta-Prp	3.40e-65	221.8	48	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllks 38
           H+d+vtcla+   s  +++sG+ Dg++++WD r+g ++k+
   Q: 316  HEDGVTCLAWlgaS--YVASGCVDGKVRLWDSRSGECVKT 353
           9*********7644..*********************986 PP

UBD/Beta-Prp

   S: 82   stgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           ++g+ vh++++h+ +++s++ sp++ d +++++ d+   +w++ +g +    l+gh+++v++++++ dg++l+sGslD+++++Wd++ +   ++
   Q: 48   EDGDFVHKFTAHTGELYSVACSPTDaDLVATAGGDDRGFLWKIGQGDWAF-ELQGHEESVSSLAFSYDGQCLASGSLDGIIKVWDVSGNLEGKK 140
           47999******************777**********************99.9**********************************88888999 PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           ++g   + +++l +++ g  l++gs+d ++ +w+  +   ++t++gh d v++ +f+p+++++ +gs+D ++riW+ ++g+ ++++ +h
   Q: 141  FEG-PGGGIEWLRWHPRGHILLAGSEDFSIWMWNTDNAALLNTFIGHGDSVTCGDFTPDGKIICTGSDDATLRIWNPKTGESTHVVRGH 228
           *99.********************************************************************************99886 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSAPPHHDDD DDNEEVFLDE SDIIHEVAMD NEDLPDADDD SELLEEDEDG DFVHKFTAHT 60
GELYSVACSP TDADLVATAG GDDRGFLWKI GQGDWAFELQ GHEESVSSLA FSYDGQCLAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTACCCTTAG ATCCTTTAAC CCGTCTCTTC TGCAGACCTG CAAATTGCAG TCACTCACGT 60
ACACGCCCAC CTCCTACCCT TTGTTCGGAT TCATCCATTT GATTTTGAGC GCATTTTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

gmx:100790414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	52.35	9.00e-109	387.00
IUUC-Aml-001781	Ailuropoda melanoleuca	35.34	6.00e-57	214.00
IUUC-Atr-003169	Amborella trichopoda	64.06	2.00e-132	464.00
IUUC-Aca-004594	Anolis carolinensis	35.69	6.00e-56	211.00
IUUC-Aly-006277	Arabidopsis lyrata	62.43	4.00e-121	427.00
IUUC-Ath-007701	Arabidopsis thaliana	65.60	9.00e-133	466.00
IUUC-Ago-007790	Ashbya gossypii	25.38	1.00e-21	97.40
IUUC-Ame-011651	Astyanax mexicanus	32.98	2.00e-50	192.00
IUUC-Bta-012833	Bos taurus	35.34	1.00e-56	213.00
IUUC-Bdi-014831	Brachypodium distachyon	57.06	6.00e-114	404.00
IUUC-Bol-015389	Brassica oleracea	63.61	2.00e-133	468.00
IUUC-Bra-017115	Brassica rapa	61.78	5.00e-118	417.00
IUUC-Cel-018305	Caenorhabditis elegans	25.94	3.00e-30	125.00
IUUC-Cja-019433	Callithrix jacchus	35.34	9.00e-57	214.00
IUUC-Cfa-020093	Canis familiaris	35.92	4.00e-58	218.00
IUUC-Cpo-021742	Cavia porcellus	35.34	7.00e-57	214.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	41.43	2.00e-70	259.00
IUUC-Csa-023498	Chlorocebus sabaeus	35.63	1.00e-56	213.00
IUUC-Cho-024628	Choloepus hoffmanni	36.00	2.00e-44	173.00
IUUC-Cin-025244	Ciona intestinalis	33.16	7.00e-54	204.00
IUUC-Csv-026218	Ciona savignyi	32.25	2.00e-49	189.00
IUUC-Dre-028528	Danio rerio	36.34	5.00e-57	214.00
IUUC-Dno-029297	Dasypus novemcinctus	35.34	1.00e-56	213.00
IUUC-Ete-033100	Echinops telfairi	40.00	2.00e-40	159.00
IUUC-Eca-034277	Equus caballus	35.34	1.00e-56	214.00
IUUC-Fca-036115	Felis catus	35.92	7.00e-58	218.00
IUUC-Fal-036864	Ficedula albicollis	36.56	1.00e-62	233.00
IUUC-Gmo-039090	Gadus morhua	38.03	1.00e-39	156.00
IUUC-Gga-040545	Gallus gallus	36.83	1.00e-62	233.00
IUUC-Gac-042027	Gasterosteus aculeatus	37.83	2.00e-61	229.00
IUUC-Ggo-045036	Gorilla gorilla	35.34	9.00e-57	214.00
IUUC-Hsa-046749	Homo sapiens	35.34	9.00e-57	214.00
IUUC-Hvu-047217	Hordeum vulgare	54.29	3.00e-112	398.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	35.34	6.00e-57	214.00
IUUC-Kpa-049147	Komagataella pastoris	26.54	8.00e-24	104.00
IUUC-Lch-049747	Latimeria chalumnae	34.53	4.00e-48	185.00
IUUC-Lpe-050986	Leersia perrieri	56.50	2.00e-115	409.00
IUUC-Loc-052406	Lepisosteus oculatus	36.96	2.00e-61	229.00
IUUC-Laf-053901	Loxodonta africana	35.34	1.00e-56	213.00
IUUC-Mcc-054990	Macaca mulatta	35.34	8.00e-57	214.00
IUUC-Meu-056844	Macropus eugenii	35.34	4.00e-55	208.00
IUUC-Mtr-057759	Medicago truncatula	70.62	2.00e-136	478.00
IUUC-Mla-058856	Melampsora laricipopulina	33.52	3.00e-50	192.00
IUUC-Mga-059749	Meleagris gallopavo	37.37	2.00e-62	232.00
IUUC-Mvi-060237	Microbotryum violaceum	31.34	7.00e-51	194.00
IUUC-Mmr-061270	Microcebus murinus	34.25	3.00e-54	206.00
IUUC-Mdo-062965	Monodelphis domestica	35.34	2.00e-55	210.00
IUUC-Mmu-064081	Mus musculus	35.63	1.00e-57	216.00
IUUC-Mac-065236	Musa acuminata	63.42	7.00e-129	453.00
IUUC-Mpu-066355	Mustela putorius furo	35.92	6.00e-58	218.00
IUUC-Mlu-067630	Myotis lucifugus	35.24	2.00e-55	209.00
IUUC-Nle-069701	Nomascus leucogenys	35.34	7.00e-57	214.00
IUUC-Opr-070337	Ochotona princeps	36.75	2.00e-47	183.00
IUUC-Ont-072614	Oreochromis niloticus	37.24	3.00e-60	225.00
IUUC-Ocu-073912	Oryctolagus cuniculus	35.06	3.00e-56	212.00
IUUC-Oba-075195	Oryza barthii	59.27	2.00e-114	405.00
IUUC-Obr-076059	Oryza brachyantha	59.29	4.00e-119	421.00
IUUC-Ogl-077318	Oryza glaberrima	59.00	1.00e-117	416.00
IUUC-Ogu-078579	Oryza glumaepatula	57.26	5.00e-116	410.00
IUUC-Oin-079340	Oryza indica	59.00	1.00e-117	416.00
IUUC-Olo-080813	Oryza longistaminata	56.46	2.00e-115	409.00
IUUC-Ome-081420	Oryza meridionalis	59.27	2.00e-114	405.00
IUUC-Oni-082650	Oryza nivara	59.27	2.00e-114	405.00
IUUC-Opu-083832	Oryza punctata	59.88	1.00e-115	409.00
IUUC-Oru-084207	Oryza rufipogon	59.27	2.00e-114	405.00
IUUC-Osa-085708	Oryza sativa	59.00	1.00e-117	416.00
IUUC-Ola-087164	Oryzias latipes	36.81	1.00e-59	223.00
IUUC-Olu-087824	Ostreococcus lucimarinus	42.58	2.00e-64	239.00
IUUC-Oga-088864	Otolemur garnettii	35.34	5.00e-57	214.00
IUUC-Oar-090115	Ovis aries	35.06	3.00e-56	212.00
IUUC-Ptr-091398	Pan troglodytes	35.34	8.00e-57	214.00
IUUC-Pan-092002	Papio anubis	35.34	9.00e-57	214.00
IUUC-Pma-094618	Petromyzon marinus	32.33	2.00e-52	199.00
IUUC-Ppa-095351	Physcomitrella patens	51.52	1.00e-113	402.00
IUUC-Pfo-097078	Poecilia formosa	37.54	3.00e-60	225.00
IUUC-Pab-098540	Pongo abelii	35.34	7.00e-57	214.00
IUUC-Pop-099761	Populus trichocarpa	69.17	1.00e-137	482.00
IUUC-Pca-101072	Procavia capensis	35.96	3.00e-54	205.00
IUUC-Ppe-101979	Prunus persica	69.12	3.00e-142	498.00
IUUC-Pva-102400	Pteropus vampyrus	31.03	1.00e-43	170.00
IUUC-Pgr-103362	Puccinia graminis	31.02	1.00e-47	184.00
IUUC-Ptt-103756	Puccinia triticina	34.33	5.00e-36	145.00
IUUC-Rno-105672	Rattus norvegicus	35.34	5.00e-57	214.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	28.53	5.00e-44	171.00
IUUC-Spo-108208	Schizosaccharomyces pombe	29.29	6.00e-48	184.00
IUUC-Smo-109093	Selaginella moellendorffii	48.21	9.00e-101	360.00
IUUC-Sit-109978	Setaria italica	58.82	3.00e-119	421.00
IUUC-Sly-111316	Solanum lycopersicum	71.64	2.00e-145	508.00
IUUC-Stu-111956	Solanum tuberosum	70.67	6.00e-144	503.00
IUUC-Sbi-114189	Sorghum bicolor	56.47	1.00e-113	403.00
IUUC-Sre-115029	Sporisorium reilianum	31.58	6.00e-46	178.00
IUUC-Ssc-116045	Sus scrofa	31.67	2.00e-40	159.00
IUUC-Tgu-117514	Taeniopygia guttata	36.29	3.00e-62	232.00
IUUC-Tru-117851	Takifugu rubripes	34.58	2.00e-58	219.00
IUUC-Tsy-119140	Tarsius syrichta	36.21	8.00e-49	187.00
IUUC-Tni-120248	Tetraodon nigroviridis	36.58	2.00e-59	223.00
IUUC-Tca-121686	Theobroma cacao	67.24	5.00e-137	480.00
IUUC-Tae-123208	Triticum aestivum	54.69	3.00e-112	398.00
IUUC-Tur-126174	Triticum urartu	55.00	2.00e-109	389.00
IUUC-Ttr-128182	Tursiops truncatus	35.34	1.00e-56	213.00
IUUC-Uma-129624	Ustilago maydis	31.15	2.00e-47	182.00
IUUC-Vpa-130605	Vicugna pacos	32.79	4.00e-41	161.00
IUUC-Vvi-131319	Vitis vinifera	66.84	5.00e-147	513.00
IUUC-Xtr-132193	Xenopus tropicalis	37.26	3.00e-62	232.00
IUUC-Xma-133880	Xiphophorus maculatus	37.54	1.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence