DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004624 mmu-miR-15a* 56513 Pard6a acUCCGUCG-UGUCAUACCGGAc |||| || : | ||||||| uuAGGCUGCGGGAACAUGGCCUg 2 21 27 49 [mm9:8:108227289-108227311:+] 0.5456 155 7 -26.29 -0.1196 MIMAT0003896 mmu-miR-763 56513 Pard6a cgguGACCAAGAAGGGUCGACc |||| |||:||||||| uggcCUGG-ACUUUCCAGCUGg 2 19 43 63 [mm9:8:108227305-108227325:+] 0.5711 164 7 -30.78 -0.3395 MIMAT0003898 mmu-miR-760 56513 Pard6a aggggugucuGGGUCUCGGc | ||||||| uuagcuugcuCACAGAGCCc 2 11 74 93 [mm9:8:108227336-108227355:+] 0.5711 142 7 -19.07 -0.5389 MIMAT0004825 mmu-miR-423-5p 56513 Pard6a uuUCAGAGCGAGAG--ACGGG-GAGu || ||:|||| | |||| ||| uuAG-CUUGCUCACAGAGCCCUCUCa 2 22 74 98 [mm9:8:108227336-108227360:+] 0.5711 122 0 -24.61 -0.6411 MIMAT0003493 mmu-miR-703 56513 Pard6a aagaaaggaaGACUUCCAAAa :| ||||||| cuggugaacaUUAAAGGUUUu 2 12 101 121 [mm9:8:108227363-108227383:+] 0.5711 143 7 -7.89 -1.1983 MIMAT0004850 mmu-miR-883b-5p 56513 Pard6a acugacgaUGGGUAAGAGUCAu :||| ||||||| cucacagaGCCC--UCUCAGUc 2 15 82 101 [mm9:8:108227344-108227363:+] 0.5711 143 7 -14.60 -0.2359 MIMAT0005847 mmu-miR-1190 56513 Pard6a cuGUCUCCCCUUGGAGUC-GACu || || | :||||| ||| cuCACAGAGCCCUCUCAGUCUGg 2 21 82 104 [mm9:8:108227344-108227366:+] 0.5711 120 0 -21.72 -0.8175 MIMAT0009417 mmu-miR-1950 56513 Pard6a acugguauaggaaUCUACGUCu |||||||| ------caggcaaAGAUGCAGc 2 10 1 16 [mm9:8:108227263-108227278:+] 0.5828 145 7 -12.32 -0.7865 MIMAT0009428 mmu-miR-1956 56513 Pard6a agGCGACUGAGU-CGGGACCUGa :|| |: || | ||||||| gcUGCGGGAACAUGGCCUGGACu 2 21 31 53 [mm9:8:108227293-108227315:+] 0.5711 151 7 -26.87 -0.2909 MIMAT0013803 mmu-miR-2861 56513 Pard6a ggCGGGCGGCGGUC-CGGGg ||::||: ||| |||| uaGCUUGCUCACAGAGCCCu 2 18 75 94 [mm9:8:108227337-108227356:+] 0.5711 121 0 -22.79 -0.3554 MIMAT0003450 mmu-miR-488 56513 Pard6a cuGGUUCUUUGUC-GGAA-AGUu | |||| :||| |||| ||| ggCAAAGAUGCAGCCCUUGUCAc 2 20 3 25 [mm9:8:108227265-108227287:+] 0.5828 130 0 -15.92 -0.9756

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G006529 G069077 Pard6a Mus musculus 56513

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Pard6a mmu-miR-106b beg:8 end:30 pic:3' TAGACGTGACAGTC-GTGAAAT 5'& |||| | ||||||| &5' ---TGCAGCCCTTGTCACTTTA 3' Pard6a mmu-miR-124star beg:93 end:112 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& ||| |||.| |||||||. &5' -TCA--GTCTG--GTGAACAT- 3' Pard6a mmu-miR-151-3p beg:81 end:105 pic:3' GGAGTTCCTCGG---AGTCAGATC 5'& |||| ||||| |||||||.| &5' -CTCACAGAGCCCTCTCAGTCTGG 3' Pard6a mmu-miR-15astar beg:27 end:50 pic:3' ACTCCGTCGTGTCA-TACCGGAC 5'& |||| ||. . |||||||| &5' --AGGCTGCGGGAACATGGCCTG 3' Pard6a mmu-miR-1950 beg:0 end:16 pic:3' ACTGGTATAGGAATCTACGTCT 5'& || | |||||||| &5' ----CAGG-CAA-AGATGCAG- 3' Pard6a mmu-miR-1956 beg:29 end:54 pic:3' AGGCGA-CTGAGTCGGGACCTGA 5'& |.|| || | |||||||| &5' -CTGCGGGAACATGGCCTGGACT 3' Pard6a mmu-miR-1982star beg:79 end:100 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& ||| ||| |||||.||. &5' -CTCA-CAGAGCCCTCTCAG 3' Pard6a mmu-miR-20a beg:8 end:30 pic:3' GATGGACGTGATATTC-GTGAAAT 5'& |||| | ||||||| &5' -----TGCAGCCCTTGTCACTTTA 3' Pard6a mmu-miR-33 beg:1 end:14 pic:3' ACGTTACGTTGATGTTACGTG 5'& |||| .||||| &5' ------GCAAA---GATGCA- 3' Pard6a mmu-miR-493 beg:37 end:57 pic:3' GGACCGTGTGTCAT-CCTGGAAGT 5'& |||..| ||||.||| &5' ------ACATGGCCTGGACTTTC- 3' Pard6a mmu-miR-682 beg:10 end:38 pic:3' GTCTGA---AGTGACA-CTGACGTC 5'& ||| | ||||| |.||||.| &5' CAGCCCTTGTCACTTTAGGCTGCGG 3' Pard6a mmu-miR-763 beg:42 end:64 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& | | |||| |||.|||||||| &5' GGC-CTGGA-CTTTCCAGCTGG 3' Pard6a mmu-miR-804 beg:69 end:88 pic:3' AGGTCCACTCCTTGT-TGAGTGT 5'& || |.| .|||||| &5' -------GATTAGCTTGCTCACA 3' Pard6a mmu-miR-883a-5p beg:90 end:101 pic:3' CATTGACGATGAAGAGAGTCGT 5'& |||||||. &5' -------------CTCTCAGT- 3' Pard6a mmu-miR-883b-5p beg:87 end:101 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& .||| ||||||| &5' --------GCCC--TCTCAGT- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Pard6a; Par6a mmu-miR-100 22 40 -GUGUUCAAGCCUAGAUGCCCAA ||| || ||:|||| UCACUUUA--GG--CUGCGGGA- Pard6a; Par6a mmu-miR-103 13 37 AGUAUCGGGA-CA-UGUUA--CGACGA |||||| || || ||||| ---CAGCCCUUGUCACUUUAGGCUGCG Pard6a; Par6a mmu-miR-107 8 37 ACUA--UCGGGA-CA-UGUUA--CGACGA ||| |||||| || || ||||| AGAUGCAGCCCUUGUCACUUUAGGCUGCG Pard6a; Par6a mmu-miR-10b 22 40 UGUGUUUAAGCCAAGAUGUCCC ||| || ||:|:|| UCACUUUA--GG--CUGCGGGA Pard6a; Par6a mmu-miR-149 61 94 CCUCA---CUUCU----------GUGCCUCGGUCU |:|| ||||| ||| ||||| UGGGUAGAGAAGAUUAGCUUGCUCACAGAGCCC-- Pard6a; Par6a mmu-miR-151 81 104 GGAGUUCCUCGG---AGUCAGAUC |||| ||||| |||||||: GCUCACAGAGCCCUCUCAGUCUG- Pard6a; Par6a mmu-miR-18 3 23 AUAGACGUGAUCUACGU--GGAAU- ||| ||||||| ||||: ----GGCAA-AGAUGCAGCCCUUGU Pard6a; Par6a mmu-miR-201 36 68 -UCUUGUUACGGAA---------UGACUCAU- :||||| |||| :|||:||| GGGAACAUGGCCUGGACUUUCCAGCUGGGUAG Pard6a; Par6a mmu-miR-206 39 60 GGUGUGUGAAGGAA-UGUAAGGU- |||: ||| || ||||| ---AACAUGGCCUGGACUUUCCAG Pard6a; Par6a mmu-miR-214 44 64 GACGGACAGACACGGACGACA ||||| || |||| -GGCCUGGACUUUCCAGCUGG Pard6a; Par6a mmu-miR-216b 21 59 -AGUGUAAACGGACGUC-----------UCUAAAGGG- |||| || | ||||:| :|| ||:|| GUCACUUUAGGCUGCGGGAACAUGGCCUGGACUUUCCA Pard6a; Par6a mmu-miR-24 46 94 -GAC----AAGGACGACU-------------UGA--------CUCGGU ||| |||| ||||: :|| ||||| CCUGGACUUUCCAGCUGGGUAGAGAAGAUUAGCUUGCUCACAGAGCCC Pard6a; Par6a mmu-miR-293 22 43 UGUGAUGUUUGAGACGCCG-UGA |||| :|: |||||| || UCACUUUAGG--CUGCGGGAACA Pard6a; Par6a mmu-miR-300 68 86 -CUUCUC-UCGAACGGGAACGUAU ||||| |||||||:| AGAAGAUUAGCUUGCUCA------ Pard6a; Par6a mmu-miR-324-3p 29 65 GGUCGUCG---------UGGACCCC----GUC-ACC- :|| || :||||| ||| ||| -AGGCUGCGGGAACAUGGCCUGGACUUUCCAGCUGGG Pard6a; Par6a mmu-miR-331 35 67 AAGAUCCUAU--CCGGGUC-----------CCCG- :||| ||||::| |||: ---CGGGAACAUGGCCUGGACUUUCCAGCUGGGUA Pard6a; Par6a mmu-miR-370 43 69 -UUGGUCC---AAGGUGGGGUCGUCCG ::|| || ||||| |: :|:|| UGGCCUGGACUUUCCAGCUGGGUAGA- Pard6a; Par6a mmu-miR-381 3 24 -UGUCUCU-CGAACGGGAACAUAU :|| ||| || |||||||| GGCAAAGAUGCA-GCCCUUGUC-- Pard6a; Par6a mmu-miR-455-3p 14 38 UCACAUAUACGGGCAC--------CUGACGUA |||| || |:||||: --------AGCCCUUGUCACUUUAGGCUGCGG Pard6a; Par6a mmu-miR-484 29 52 UAGCCCUC-CCCUG--ACUCGGACU- || | |||| || |||||: --AGGCUGCGGGAACAUG-GCCUGGA Pard6a; Par6a mmu-miR-488* 2 26 -CUGGUUCUUUGUCGGAA--AGUU |:| |||| :||||| ||| AGGCAAAGAUGCAGCCCUUGUCAC Pard6a; Par6a mmu-miR-500 10 38 GAC-UUGGGAACGG----GUCC-ACGUA || |:||||||:| :||| |||: AUGCAGCCCUUGUCACUUUAGGCUGCGG Pard6a; Par6a mmu-miR-615 6 40 -UUCUCCCUCUGGG----------UCCGA-GCCU- |||| | || ||| ||||| |||: AAAGAUGCAG-CCCUUGUCACUUUAGGCUGCGGGA Pard6a; Par6a mmu-miR-666 48 85 -CC-GAGAGUGUCGACA-------------CGGGCGA- || ||:|| |||||| || ||| UGGACUUUC-CAGCUGGGUAGAGAAGAUUAGCUUGCUC Pard6a; Par6a mmu-miR-669b 72 93 UGUACGUGUACGUGUGUUUUGA || :| ||| ||||:|:| -GAUUAGCUUGCUCACAGAGCC Pard6a; Par6a mmu-miR-671 10 50 GGAGGUCGGGGA-GGUC----CCGAA-----------GGA | ||||||:| :|| |||| ||| -AUGCAGCCCUUGUCACUUUAGGCUGCGGGAACAUGGCCUG Pard6a; Par6a mmu-miR-674 79 102 -AUGUGGUGA---GGGUAGAGUCACG |:| :||| ||| ||||||| UUGC-UCACAGAGCCC-UCUCAGUC- Pard6a; Par6a mmu-miR-679 82 104 UGGU-UCUCAGUGGAGUGUCAGG- :|| |||| | |||| |||||: CUCACAGAG-C-CCUCUCAGUCUG Pard6a; Par6a mmu-miR-681 29 67 -UCGA-----------CGGAC------GGUCGCUCCGAC :||| ||||| ||||| :||: AGGCUGCGGGAACAUGGCCUGGACUUUCCAGCUGGGUA- Pard6a; Par6a mmu-miR-682 7 39 GUCUGA---------AGUGACA-CUGACGUC- |||: ||||| |:||||:| AAGAUGCAGCCCUUGUCACUUUAGGCUGCGGG Pard6a; Par6a mmu-miR-689 14 43 CCUGGGG-----------CGGCUCGCCCCUGC :|||: ||: ||||| || -AGCCCUUGUCACUUUAGGCU--GCGGGAACA Pard6a; Par6a mmu-miR-690 29 50 AAACCAACACUCGG--AUCGGAAA || || |:| |:|||| --AGGCUGCGGGAACAUGGCCUG- Pard6a; Par6a mmu-miR-693-3p 10 37 AAUGUCGGU----GUAGACUUUCGACG- |:||||| || || |:||||| AUGCAGCCCUUGUCA-CUUUAGGCUGCG Pard6a; Par6a mmu-miR-705 79 100 -ACGGGUGGGGU-GGAGGGUGG |||:||| ||||:|| UUGCUCACAGAGCCCUCUCAG- Pard6a; Par6a mmu-miR-707 27 51 GCAUCCGUUCGCC---GUACU-GAC- ||||| |||| ||||: ||| -UUAGGCU-GCGGGAACAUGGCCUGG Pard6a; Par6a mmu-miR-714 2 25 CGCUGG--CUG-GCCGGGAGCAGC |:| ||: | |||||:||| -AGGCAAAGAUGCAGCCCUUGUCA Pard6a; Par6a mmu-miR-742 14 58 AAAUGGG-----------UCG---------UACC--ACC-GAAAG :||| :|| |||| ||| ||||| --AGCCCUUGUCACUUUAGGCUGCGGGAACAUGGCCUGGACUUUCC Pard6a; Par6a mmu-miR-762 42 63 CGAGACAGGGCCG---GGGUCGGGG || ||:|| :|||||: ---AUGGCCUGGACUUUCCAGCUG- Pard6a; Par6a mmu-miR-763 44 65 -CGGUGACCAAGAAGGGUCGACC- ||| ||| |||:|||||||| GGCC--UGGA-CUUUCCAGCUGGG Pard6a; Par6a mmu-miR-764-3p 11 50 -UGUC---AACGGUGA---------------UACCGGAGGA :||| |||:|||| ||||||| UGCAGCCCUUGUCACUUUAGGCUGCGGGAACAUGGCCUG-- Pard6a; Par6a mmu-miR-93 29 57 GAUGGACGUGCUUGU--CG----UGAAAC : ||||: ||||| || ||||| -AGGCUGCGGGAACAUGGCCUGGACUUUC Pard6a; Par6a mmu-miR-99a 29 40 UGUUCUAGCCUAGAUGCCCA || ||:|||| -------AGG--CUGCGGGA Pard6a; Par6a mmu-miR-99b 10 40 -GCGUUC----CAGCCAA----GAUGCCCAC :|||: ||| ||:|||| AUGCAGCCCUUGUCACUUUAGGCUGCGGGA- Pard6a; Par6a mmu-miR-763 56 63 -----------------------CGGUGACCAAGAAGGGUCGACC | | |||| |||:|||||||| GUCACUUUAGGCUGCGGGAACAUGGC-CUGGA-CUUUCCAGCUGGG Pard6a; Par6a mmu-miR-100 21 40 guGUUCAAGCCUAGAUGCCCaa || || || ||:|||| gtCACTTTAGG--CTGCGGGaa Pard6a; Par6a mmu-miR-103 10 36 aguaUCGGG-ACA-UG--UUACGACGa ||||| ||| || | ||||| atgcAGCCCTTGTCACTTTAGGCTGCg Pard6a; Par6a mmu-miR-10b 20 39 uguGUUUAAGCCAAGAUGUCCc || || || ||:|:|| tgtCACTTTAGG--CTGCGGGa Pard6a; Par6a mmu-miR-149 63 95 CC-UCACUUCU----------GUGCCUCGGucu || || ||||| ||| ||||| GGTAGAGAAGATTAGCTTGCTCACAGAGCCctc Pard6a; Par6a mmu-miR-18 1 21 auagaCGUGAUCUACGU--GGAAu ||| ||||||| |||| --cagGCA-AAGATGCAGCCCTTg Pard6a; Par6a mmu-miR-201 37 66 uCUUGUUACGG------AA---UGACUCAU ||||| ||| || :|||:||| gGAACATGGCCTGGACTTTCCAGCTGGGTA Pard6a; Par6a mmu-miR-206 36 58 ggugUGUGAAGGA-AUGUAAGGU |||: ||| || ||||| gggaACATGGCCTGGACTTTCCA Pard6a; Par6a mmu-miR-214 43 63 gaCGGA-CAGACACGGACGACa |||| | || | || |||| tgGCCTGGACT-TTCCAGCTGg Pard6a; Par6a mmu-miR-216b 22 58 AGUGUAAACGGACGUC-----------UCU-AAAGGg |||| || | ||||:| :|| ||||| TCACTTTAGGCTGCGGGAACATGGCCTGGACTTTCCa Pard6a; Par6a mmu-miR-24 73 93 gacaaGGACGACUUGACUCGGu |:|||| || ||||| attagCTTGCT-CACAGAGCCc Pard6a; Par6a mmu-miR-300 64 85 CUUCUC-UCGAA-CGGGAACGuau | |||| || || | ||||| GTAGAGAAGATTAG--CTTGCtca Pard6a; Par6a mmu-miR-324-3p 12 37 gGUCG----UCGUGGACCCCGUCACC |||| : |||:| ||| | || gCAGCCCTTGTCACTTTAGGCTGCGG Pard6a; Par6a mmu-miR-331 40 65 aagAUCCUAUCCG---GGUC--CCCg |:| |:| | |||| ||| acaTGGCCTGGACTTTCCAGCTGGGt Pard6a; Par6a mmu-miR-370 44 64 uuGGUCCAAGGUGGGGUCGUCCg || || | ::||||| || ggCCTGG--ACTTTCCAGCTGGg Pard6a; Par6a mmu-miR-381 4 25 uGUCUCU-CGAACGGGAACAuau || ||| || |||||||| gCAAAGATGC-AGCCCTTGTcac Pard6a; Par6a mmu-miR-455-3p 8 37 UC-ACAUAUACGGGCAC--------CUGACGua || || | |||| || |:|||| AGATGCA---GCCCTTGTCACTTTAGGCTGCgg Pard6a; Par6a mmu-miR-484 27 50 uAGCC--CUCCCCUG-ACUCGGACu | || | ||| || || ||||| tTAGGCTGCGGGAACATG-GCCTGg Pard6a; Par6a mmu-miR-488* 3 25 CUGGUUCUUUGUC-GGAA-AGUu |:| |||| :||| |||| ||| GGCAAAGATGCAGCCCTTGTCAc Pard6a; Par6a mmu-miR-615 7 38 UUCUCCCUCUGG---------GUCCGA-GCCu |||| | || || :||||| ||| AAGATGCAGCCCTTGTCACTTTAGGCTGCGGg Pard6a; Par6a mmu-miR-666 76 96 cCGA--GAGUGUCGACACGGGCGA ||| ||||||| |||| || aGCTTGCTCACAGA---GCCCTCT Pard6a; Par6a mmu-miR-669b 71 92 UGUACGUGUACGUGUGUUUUGa | || :| ||| ||||:|:| AGATTAGCTTGCTCACAGAGCc Pard6a; Par6a mmu-miR-671 9 37 ggAGGUCGGGGA-GGU----CCCGAAGga | ||||||:| :|| |||| | gaTGCAGCCCTTGTCACTTTAGGCTGCgg Pard6a; Par6a mmu-miR-674 82 102 auGUGGUGAGGGUAGAGUCAcg ||| : ||| ||||||| ctCACAGAGCCC-TCTCAGTct Pard6a; Par6a mmu-miR-681 11 34 uCGACGG--ACGGU-CGCUCCGAC || ||| ||:|| : |||||| tGCAGCCCTTGTCACTTTAGGCTG Pard6a; Par6a mmu-miR-682 13 37 GUCUG--A-AGUGACA-CUGACGUC ||| | | ||||| | |:||||:| CAGCCCTTGTCACTTTAGGCTGCGG Pard6a; Par6a mmu-miR-690 27 50 AAACCAACACUC--GGAUCGGAaa || || || |:| | |:|||| TTAGGCTGCGGGAACATGGCCTgg Pard6a; Par6a mmu-miR-704 27 47 gAUCC-UCGUCUCGUGUACAGa |||| || |:| ||||| | tTAGGCTGC-GGGAACATGGCc Pard6a; Par6a mmu-miR-705 80 100 ACGGGUGGGGU-GGAGGGUgg |||:||| : ||||:|| TGCTCACAGAGCCCTCTCAgt Pard6a; Par6a mmu-miR-707 26 48 gcAUCCGUUCGCC---GUACUGac ||||| |||| ||||:| ttTAGGC-TGCGGGAACATGGCct Pard6a; Par6a mmu-miR-714 4 24 CGCUGGCUG-GCCGGGAGCAGc || | ||: | |||||:||| GC-AAAGATGCAGCCCTTGTCa Pard6a; Par6a mmu-miR-742 26 56 AAAU--GG-GUC---GUACC--ACC-GAAAG |||| |: |:| ||||| ||| ||||| TTTAGGCTGCGGGAACATGGCCTGGACTTTC Pard6a; Par6a mmu-miR-762 39 63 cgagACAGGGCCGG---GGUCGggg || ||:|| | ||||| aacaTGGCCTGGACTTTCCAGCtgg Pard6a; Par6a mmu-miR-763 45 63 CGGUGACCAAGAAGGGUCGACC || |||| |||:|||||||| GC--CTGG-ACTTTCCAGCTGG Pard6a; Par6a mmu-miR-764-3p 28 51 uguCAACG---GUGAUACCGGAgga | ||| || ||||||| tagGCTGCGGGAAC-ATGGCCTgga Pard6a; Par6a mmu-miR-93 28 56 gaugGACGUGCUUGU------CGUGAAAc ||||: ||||| | ||||| taggCTGCGGGAACATGGCCTGGACTTTc Pard6a; Par6a mmu-miR-99a 22 39 uGUUCUAGCCUAGAUGCCCa || | || ||:|||| tCACTTTAGG--CTGCGGGa Pard6a; Par6a mmu-miR-99b 15 40 gcguucCAGCCAA----GAUGCCCac ||| || ||:|||| gcccttGTCACTTTAGGCTGCGGGaa

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Pard6a RAID01172669 mmu-miR-6377 miRNA MIMAT0025122 Pard6a mRNA 56513 Prediction 0.1828 Pard6a RAID01857932 mmu-miR-488-3p miRNA MIMAT0003450 Pard6a mRNA 56513 Prediction 0.1828 Pard6a RAID02252952 mmu-miR-703 miRNA MIMAT0003493 Pard6a mRNA 56513 Prediction 0.1828