DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Rnf168; RNF168 ATTTA 627-2324 2466-2470;3032-3036;3544-3548;3867-3871

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT577817 mmu-miR-15b-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577816 mmu-miR-195a-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577815 mmu-miR-15a-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577813 mmu-miR-16-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577812 mmu-miR-322-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577819 mmu-miR-503-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577818 mmu-miR-497a-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577810 mmu-miR-495-3p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT605514 mmu-miR-717 Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT601713 mmu-miR-493-3p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT577811 mmu-miR-1192 Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT577814 mmu-miR-1907 Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT594811 mmu-miR-1264-3p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 23142080 MIRT605515 mmu-miR-3071-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT586058 mmu-miR-3087-3p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586060 mmu-miR-3110-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586060 mmu-miR-3110-5p Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT586059 mmu-miR-3470b Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT597427 mmu-miR-3473c Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT605516 mmu-miR-5119 Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT586061 mmu-miR-5125 Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT586061 mmu-miR-5125 Mus musculus Rnf168 70238 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004526 mmu-miR-101a* 70238 Rnf168 cgUAGUCGUGACA-CUAUUGACu :|: ||:||| ||||||| uuGUUUCCAUUGUCAAUAACUGc 2 21 239 261 [mm9:16:32299606-32299628:+] 0.5373 155 7 -13.88 -0.1892 MIMAT0004527 mmu-miR-124* 70238 Rnf168 uaGUUCCAGGCGACA-CUUGUGc :| | ||:||||| |||||| acUACGCUCUGCUGUCGAACACc 2 21 1374 1396 [mm9:16:32300741-32300763:+] 0.5431 140 6 -21.04 -0.2935 MIMAT0004538 mmu-miR-10b* 70238 Rnf168 auAAGGGGAUCUUA-----GCUUAGAc || ||||:|:|| ||||||| caUUACCCUGGGAUCCAGACGAAUCUu 2 21 1480 1506 [mm9:16:32300847-32300873:+] 0.5431 159 7 -22.13 -0.2968 MIMAT0004545 mmu-miR-200b* 70238 Rnf168 agguuacgacggguCAUUCUac |||||| acaaauaaauuauuGUAAGAaa 3 9 1347 1368 [mm9:16:32300714-32300735:+] 0.5431 120 0 -5.63 -0.1167 MIMAT0000378 mmu-miR-300 70238 Rnf168 cuuCUCUCGAACGGGAACGUAu | |:|:||| :||||||| gguGUGGGUUUG-UCUUGCAUu 2 20 1463 1483 [mm9:16:32300830-32300850:+] 0.5431 161 7 -19.47 -0.2425 MIMAT0004579 mmu-miR-302a* 70238 Rnf168 cguUCAUGUUGGUGCAAAUUCa | |:||| : ||||||| guuAAUGCAA--GGGUUUAAGa 2 20 1109 1128 [mm9:16:32300476-32300495:+] 0.5356 148 7 -9.99 -0.2197 MIMAT0004579 mmu-miR-302a* 70238 Rnf168 cgUUCAUGUUGGUGCAA-AUUCa || || :| ::||| |||| ucAAUAACUGCAGUGUUCUAAGu 2 21 251 273 [mm9:16:32299618-32299640:+] 0.5373 120 0 -10.50 -0.2138 MIMAT0004583 mmu-miR-130b* 70238 Rnf168 ucaucaCGUUGUCCCUUUCUCa || |::||||||||| agcaaaGC-AUGGGGAAAGAGu 2 17 49 69 [mm9:16:32299416-32299436:+] 0.6168 158 7 -21.29 -0.3592 MIMAT0004619 mmu-miR-200a* 70238 Rnf168 aggucgUGACAGGCCAUUCUac |:| |: |||||| aaauaaAUUAUU--GUAAGAaa 3 17 1349 1368 [mm9:16:32300716-32300735:+] 0.5431 121 0 -7.25 -0.1048 MIMAT0004620 mmu-let-7a* 70238 Rnf168 ccuUUCUGUCAUCUAA-CAUAUc :||| :| : ||| ||||| uguGAGAGGGCGAAUUGGUAUAu 2 20 1303 1325 [mm9:16:32300670-32300692:+] 0.5412 123 0 -7.93 -0.3916 MIMAT0005439 mmu-let-7c-2* 70238 Rnf168 ccuUUCUGUCAUCUAA-CAUAUc :||| :| : ||| ||||| uguGAGAGGGCGAAUUGGUAUAu 2 20 1303 1325 [mm9:16:32300670-32300692:+] 0.5412 123 0 -7.93 -0.3916 MIMAT0004625 mmu-miR-16* 70238 Rnf168 agucgucGUGUCAGUUA-UGACc ||: |||||| |||| uuguuucCAUUGUCAAUAACUGc 2 16 239 261 [mm9:16:32299606-32299628:+] 0.5373 127 0 -12.63 -0.2152 MIMAT0004636 mmu-miR-93* 70238 Rnf168 gcccuucacgaucGAGUCGUCa :||||||| ugaacuuaggaccUUCAGCAGc 2 10 1044 1065 [mm9:16:32300411-32300432:+] 0.5000 141 7 -13.75 -0.1351 MIMAT0004640 mmu-miR-325 70238 Rnf168 aacuauccuccACGAGUUAUUu || ||||||| auuguuuccauUG-UCAAUAAc 2 12 238 258 [mm9:16:32299605-32299625:+] 0.5373 141 7 -4.91 -0.2834 MIMAT0004647 mmu-miR-338-5p 70238 Rnf168 gugagucgugguccuAUAACAa |||||| uagaaacaaauaaauUAUUGUa 2 8 1342 1363 [mm9:16:32300709-32300730:+] 0.5431 120 6 -4.62 -0.1266 MIMAT0000650 mmu-miR-17* 70238 Rnf168 gauGUUCACGG-GAGUGACGUCa | | ||:| | ||||||| uuuCCAUUGUCAAUAACUGCAGu 2 20 242 264 [mm9:16:32299609-32299631:+] 0.5373 150 7 -17.31 -0.5802 MIMAT0000650 mmu-miR-17* 70238 Rnf168 gauGUUCACGGGAGUGACG-UCa | | |||| |||||| || ucuCUACAGCCC-CACUGCUAGa 2 20 1085 1106 [mm9:16:32300452-32300473:+] 0.5178 121 0 -24.76 -0.4893 MIMAT0004660 mmu-miR-19a* 70238 Rnf168 caucacguuGAUACGUUUUGAu || | ||||||| gccacuuccCUUUCCAAAACUu 2 14 323 344 [mm9:16:32299690-32299711:+] 0.5564 149 7 -7.46 -0.6690 MIMAT0004663 mmu-miR-200c* 70238 Rnf168 ggUUUGUGACGACCCAUUCUgc | | |:| :| |||||| aaAUAAAUUAUU--GUAAGAaa 3 21 1349 1368 [mm9:16:32300716-32300735:+] 0.5431 125 0 -7.54 -0.1059 MIMAT0000672 mmu-miR-199b* 70238 Rnf168 cuUGUCCAUCAGAUUUGUG--ACCc ||||||| | |||||| ||| uuACAGGUA-UAAAAACACCUUGGu 2 22 283 306 [mm9:16:32299650-32299673:+] 0.4906 123 0 -17.57 -0.2308 MIMAT0001093 mmu-miR-411* 70238 Rnf168 ccaaucaccuggcacAAUGUAu |||||| acagcuacaguguacUUACAUa 2 8 645 666 [mm9:16:32300012-32300033:+] 0.5000 120 6 -9.75 -0.1181 MIMAT0001422 mmu-miR-434-3p 70238 Rnf168 uccucagcucacuacCAAGUUu |||||| ucccagagaagcauuGUUCAAa 2 8 10 31 [mm9:16:32299377-32299398:+] 0.6728 120 6 -8.92 -0.2996 MIMAT0002109 mmu-miR-468 70238 Rnf168 gucUGUGUGCGUGUAGUCA-GUAu | |||| : :||||| ||| uaaAAACACCUUGGUCAGUACAUc 2 21 292 315 [mm9:16:32299659-32299682:+] 0.5235 124 0 -12.65 -0.2187 MIMAT0003170 mmu-miR-541 70238 Rnf168 ucacaCUGGUUGUAG-UCUUAGGGAa || || : || ||||||| uagcaGAACAUUCUCUUUAAUCCCUu 2 21 1224 1249 [mm9:16:32300591-32300616:+] 0.5392 147 7 -13.12 -0.8615 MIMAT0004788 mmu-miR-20b* 70238 Rnf168 gaucuUCACGAGUG-UGACGUCa | ||: |: ||||||| uuuccAUUGUCAAUAACUGCAGu 2 18 242 264 [mm9:16:32299609-32299631:+] 0.5373 144 7 -15.67 -0.5839 MIMAT0003373 mmu-miR-302b* 70238 Rnf168 ucuuucguaaggguacAAUUUCa |||||| agauuguuuguuuuuuUUAAAGa 2 8 731 753 [mm9:16:32300098-32300120:+] 0.5004 120 6 -5.92 -0.1738 MIMAT0003375 mmu-miR-302c* 70238 Rnf168 cguccauugggguacAAUUUCg |||||| gauuguuuguuuuuuUUAAAGa 2 8 732 753 [mm9:16:32300099-32300120:+] 0.5004 120 6 -4.80 -0.1788 MIMAT0003726 mmu-miR-675-3p 70238 Rnf168 ugaCUCGCCAAUCCCG-UAUGUc |: | | ||||| ||||| ccaGGACAGCCAGGGCUAUACAg 2 20 869 891 [mm9:16:32300236-32300258:+] 0.5000 123 0 -18.41 -0.2010 MIMAT0014816 mmu-miR-3099 70238 Rnf168 agGGGUUGGAGAGAGAUCGGAu || || || |:| |||||| uuCCAAAACU-UUUAUAGCCUu 2 21 334 354 [mm9:16:32299701-32299721:+] 0.5564 134 6 -21.46 -0.1319 MIMAT0003466 mmu-miR-687 70238 Rnf168 agUAACGA---CGUAAGGUC-CUAUc ||||:| ::||:||| |||| gcAUUGUUCAAAUGUUUCAGAGAUAa 2 21 20 45 [mm9:16:32299387-32299412:+] 0.6728 123 0 -16.72 -0.6192 MIMAT0003466 mmu-miR-687 70238 Rnf168 agUAACGACGUAAGGUCC-UAUc :| || | || |||| ||| guGUGGCAUCUUUACAGGUAUAa 2 21 272 294 [mm9:16:32299639-32299661:+] 0.5140 120 0 -10.84 -0.7371 MIMAT0003469 mmu-miR-690 70238 Rnf168 aaaccaacacucggAUCGGAAa ||||||| uuccaaaacuuuuaUAGCCUUu 2 9 334 355 [mm9:16:32299701-32299722:+] 0.5564 140 7 -9.95 -1.1511 MIMAT0004189 mmu-miR-693-3p 70238 Rnf168 aauGUCGGUGUAGACUU-UCGACg :||::||| ||| ||||| aauUAGUUACA---GAAUAGCUGc 2 21 709 729 [mm9:16:32300076-32300096:+] 0.5004 120 0 -18.32 -0.7621 MIMAT0003474 mmu-miR-694 70238 Rnf168 gaaGUC-CGUUGUAA-AAGUc ||| | |:|||| |||| uccCAGAGAAGCAUUGUUCAa 2 17 10 30 [mm9:16:32299377-32299397:+] 0.6728 123 0 -9.84 -1.2909 MIMAT0003499 mmu-miR-709 70238 Rnf168 aggaggacgGAGACGGAGg | ||||||| acagagaaaCCCUGCCUCa 2 11 888 906 [mm9:16:32300255-32300273:+] 0.5000 142 7 -17.73 -0.5565 MIMAT0003510 mmu-miR-717 70238 Rnf168 ucucuuccauagaGACAGACUc |||||||| gcccucuucuggcCUGUCUGAa 2 10 622 643 [mm9:16:32299989-32300010:+] 0.5000 145 7 -12.84 -0.1943 MIMAT0004237 mmu-miR-742 70238 Rnf168 aaAUGGGUCGUACCACCGAAAg |::| | || ||||||| gcUGUCGAACA-CCUGGCUUUa 2 21 1384 1404 [mm9:16:32300751-32300771:+] 0.5431 146 7 -10.71 -0.1896 MIMAT0004848 mmu-miR-883a-5p 70238 Rnf168 caUUGACGAU---GAAGAGA-GUCGu | |||||: | ||||| |||| uuACCUGCUGAGCCAUCUCUACAGCc 2 21 1070 1095 [mm9:16:32300437-32300462:+] 0.5000 127 0 -19.81 -0.1883 MIMAT0004848 mmu-miR-883a-5p 70238 Rnf168 caUUGAC-GA-UG-AAGA-GAGUCGu |: || || || |||| |||||| ugAGAUGUCUCACAUUCUGCUCAGCa 2 21 123 148 [mm9:16:32299490-32299515:+] 0.5337 125 6 -18.61 -0.4447 MIMAT0004892 mmu-miR-568 70238 Rnf168 cacacAUAUGUAAAUAUGUa | ||: ||||||| aagauUUUAUUAUUAUACAu 2 16 934 953 [mm9:16:32300301-32300320:+] 0.5000 147 7 -6.30 -1.0326 MIMAT0004938 mmu-miR-875-3p 70238 Rnf168 guaucggagucauaAAAGUCc |||||| gcauuguucaaaugUUUCAGa 2 8 20 40 [mm9:16:32299387-32299407:+] 0.6728 120 6 -11.14 -0.1059 MIMAT0005293 mmu-miR-467e 70238 Rnf168 uguAUAUGUACGAGUGUGA-AUa ||||||| :||||| || uauUAUACAUAAGUACACUGUAg 2 20 944 966 [mm9:16:32300311-32300333:+] 0.5000 131 0 -12.86 -0.5263 MIMAT0005836 mmu-miR-1186 70238 Rnf168 guacGGAAAUUAAGGUCGUGAg |||| |: ||||||| aggaCCUUCAG---CAGCACUc 2 19 1051 1069 [mm9:16:32300418-32300436:+] 0.5000 146 7 -18.49 -0.1312 MIMAT0005841 mmu-miR-669h-5p 70238 Rnf168 cgugaGUUGAUAUGUG-GGUA-CGUa ||:|| | | | |||| ||| guuuaCAGCUUUUCCCUCCAUGGCAu 2 20 1272 1297 [mm9:16:32300639-32300664:+] 0.5392 122 0 -16.65 -0.2051 MIMAT0005855 mmu-miR-467h 70238 Rnf168 uguAUAUGUACGUGUGUGA-AUa ||||||| ::||||| || uauUAUACAUAAGUACACUGUAg 2 20 944 966 [mm9:16:32300311-32300333:+] 0.5000 135 0 -13.75 -0.5263 MIMAT0005857 mmu-miR-1196 70238 Rnf168 ucCGUCUCCGUCCAUCUAAa |:|| || ||||||| cuGUAGUUUCA-GUAGAUUc 2 19 1549 1567 [mm9:16:32300916-32300934:+] 0.5431 148 7 -12.23 -0.4501 MIMAT0005858 mmu-miR-1197 70238 Rnf168 ucuucaucugguacACAGGAu |||||| ugaacauaauaaacUGUCCUa 2 8 1600 1620 [mm9:16:32300967-32300987:+] 0.5431 120 6 -9.35 -0.1319 MIMAT0005859 mmu-miR-1198 70238 Rnf168 gguucggucGGUCCUU-GUGUAu |||| || ||||| guucaaaucCCAGCAACCACAUg 2 14 567 589 [mm9:16:32299934-32299956:+] 0.5000 121 0 -15.96 -0.2253 MIMAT0007873 mmu-miR-1896 70238 Rnf168 gagGAGUGGGUGGUAGUCUCUc :||| :::: ||||||| uugUUCAAAUGUU-UCAGAGAu 2 20 23 43 [mm9:16:32299390-32299410:+] 0.6728 145 7 -16.04 -0.8632 MIMAT0007874 mmu-miR-1904 70238 Rnf168 ggaggGAGGUCUCCUCGUCUUg ||:| | ||||||| ucaggCUUC-UUGUAGCAGAAc 2 18 1212 1232 [mm9:16:32300579-32300599:+] 0.5392 143 7 -18.28 -0.4455 MIMAT0007878 mmu-miR-1894-3p 70238 Rnf168 gagggaAGUGGGAGAGGGAAcg | |:: :|||||| uaacacUAAUUAGUUCCCUUca 3 17 414 435 [mm9:16:32299781-32299802:+] 0.5040 124 0 -15.37 -0.1056 MIMAT0009392 mmu-miR-1929 70238 Rnf168 gaGACGAGAUAUUUCAGGA-UCUu |||: ||| | | |||| ||| uuCUGUCCUA-AUA-UCCUGAGAu 2 22 107 128 [mm9:16:32299474-32299495:+] 0.5319 121 0 -13.96 -0.4242 MIMAT0009409 mmu-miR-1944 70238 Rnf168 uuaGUCU-UGAAC-UGUAAGUCGUGUCUc || | :|||| |::| | ||||||| agaCACAUGCUUGUAUGUGC-GCACAGAu 2 25 1428 1455 [mm9:16:32300795-32300822:+] 0.5431 160 7 -17.67 -0.1424 MIMAT0009415 mmu-miR-1948 70238 Rnf168 gacaUGCUC-ACGAGAC-GGAUUu :| || | :|||| ||||| caaaGCUAGCUCUUCUGUCCUAAu 2 19 95 118 [mm9:16:32299462-32299485:+] 0.5576 121 0 -11.89 -0.5699 MIMAT0009416 mmu-miR-1949 70238 Rnf168 uugAUACGACUGUAGGACCAUAUc |: | |:|: :||||||| gugUGAGAGGGCGAAUUGGUAUAu 2 22 1302 1325 [mm9:16:32300669-32300692:+] 0.5412 149 7 -18.16 -0.4507 MIMAT0009437 mmu-miR-1964 70238 Rnf168 uuUCGGCCUCGGGUCUU-CAGCc |||:| ::| ||| |||| ucAGCUGCUCUUCUGAAGGUCGc 2 21 542 564 [mm9:16:32299909-32299931:+] 0.5000 120 0 -16.78 -0.1604 MIMAT0009446 mmu-miR-1971 70238 Rnf168 agaGUCGGGU-CGGAAAUg ::|| || ||||||| uggUGGCGCACGCCUUUAa 2 16 780 798 [mm9:16:32300147-32300165:+] 0.5000 150 7 -14.78 -0.1053 MIMAT0009458 mmu-miR-1981 70238 Rnf168 cggUGCAGAUUCGGGU-CGGAAAUg ::|| :|| || ||||||| cggGUGUGGUGGCGCACGCCUUUAa 2 22 774 798 [mm9:16:32300141-32300165:+] 0.5000 152 7 -18.90 -0.1053 MIMAT0011214 mmu-miR-2138 70238 Rnf168 uaagGCGGUUCGGGCAAGGGAa | |:|| :: ||||||| auaaCACUAA-UUAGUUCCCUu 2 19 413 433 [mm9:16:32299780-32299800:+] 0.5040 148 7 -15.39 -0.9146 MIMAT0011214 mmu-miR-2138 70238 Rnf168 uaaggcgguucgggcAAGGGAa |||||| uuuauagccuuuuuuUUCCCUc 2 8 344 365 [mm9:16:32299711-32299732:+] 0.5013 120 6 -12.89 -0.1242 MIMAT0011221 mmu-miR-2145 70238 Rnf168 uugguccgggcUGGGACGa ||||||| uauacagagaaACCCUGCc 2 9 885 903 [mm9:16:32300252-32300270:+] 0.5000 140 7 -16.95 -0.4319 MIMAT0012774 mmu-miR-664 70238 Rnf168 auccgaccccucAUUUACUUAu ||||||||| ucuuuuuuuuuuUAAAUGAAUg 2 11 364 385 [mm9:16:32299731-32299752:+] 0.4872 150 7 -8.11 -0.5194 MIMAT0015640 mmu-miR-3470a 70238 Rnf168 ggucggaccAGAUGUUU-CACu |:|||||| ||| aaggaagaaUUUACAAAUGUGu 2 13 179 200 [mm9:16:32299546-32299567:+] 0.5373 120 0 -10.62 -0.5454 MIMAT0015641 mmu-miR-3470b 70238 Rnf168 ggUCGGACCAGAUGUCUCACu |||||||||||||||||| ccAGCCUGGUCUACAGAGUGa 2 20 845 865 [mm9:16:32300212-32300232:+] 0.5000 195 7 -45.92 -0.1853 MIMAT0015643 mmu-miR-3472 70238 Rnf168 ccAAG-GAAGGUCGAAG-ACCGA--UAAu ||| ||||::|: || ||||| ||| gaUUCUCUUCUGGUGUCUUGGCUCCAUUu 2 24 1563 1591 [mm9:16:32300930-32300958:+] 0.5431 125 0 -20.07 -0.5898 MIMAT0015644 mmu-miR-1186b 70238 Rnf168 caccacGUACG-GAAAUUAGGGu ||| | |||||||||| gcagaaCAUUCUCUUUAAUCCCu 2 17 1226 1248 [mm9:16:32300593-32300615:+] 0.5392 163 7 -17.93 -0.8144 MIMAT0015646 mmu-miR-3474 70238 Rnf168 cuuaggugcagaggAGGGUCcc |||||| -----cauagaaagUCCCAGag 3 9 1 17 [mm9:16:32299368-32299384:+] 0.6728 120 0 -12.31 -0.1829 MIMAT0000121 mmu-let-7g 70238 Rnf168 uuGACAU--GUUUG--AUGAUG-GAGu :|||| |||: |||||| ||| uaUUGUAAGAAAAUGAUACUACGCUCu 2 21 1357 1383 [mm9:16:32300724-32300750:+] 0.5431 122 0 -16.69 -0.3386 MIMAT0000122 mmu-let-7i 70238 Rnf168 uugUCGUGUUUGAUGAUG-GAGu || | | : |||||| ||| guaAGAAAAUGAUACUACGCUCu 2 20 1361 1383 [mm9:16:32300728-32300750:+] 0.5431 123 0 -12.08 -0.3386 MIMAT0000153 mmu-miR-141 70238 Rnf168 ggUAGAAAUGGUCUGUCACAAu :|| || | | ||||||| uuGUCAAUAACUG-CAGUGUUc 2 21 248 268 [mm9:16:32299615-32299635:+] 0.5373 150 7 -9.86 -0.3139 MIMAT0000219 mmu-miR-24 70238 Rnf168 gacaAGGA-CGACUUGACUCGGu ||:| ||| ||||||| gcacUCUUACCUG--CUGAGCCa 2 19 1064 1084 [mm9:16:32300431-32300451:+] 0.5000 146 7 -20.60 -0.2215 MIMAT0000229 mmu-miR-199a-5p 70238 Rnf168 cuuguccauCAGACUUGU-GACCc ||| ||||| |||| cgcucugcuGUC-GAACACCUGGc 2 15 1378 1400 [mm9:16:32300745-32300767:+] 0.5431 120 0 -16.50 -0.3766 MIMAT0000236 mmu-miR-203 70238 Rnf168 gaucACCAGGAUUUGUA-AAGUg |||| | : |||| |||| accuUGGU-CAGUACAUCUUCAg 2 19 299 320 [mm9:16:32299666-32299687:+] 0.5235 120 0 -12.81 -0.1180 MIMAT0000518 mmu-miR-196a 70238 Rnf168 ggGUUGUUGUACUUUGAUG-GAu :|| || |||| ||||| || ugUAAGAAAAUGAUACUACGCUc 2 21 1360 1382 [mm9:16:32300727-32300749:+] 0.5431 136 0 -12.72 -0.6173 MIMAT0000519 mmu-miR-200a 70238 Rnf168 ugUAGCAAUGGU--CUGUCACAAu ||:|| | :| :||||||| ccAUUGUCAAUAACUGCAGUGUUc 2 21 245 268 [mm9:16:32299612-32299635:+] 0.5373 151 7 -14.84 -0.3348 MIMAT0000525 mmu-let-7f 70238 Rnf168 uugaUAUGUUA-GAUGAUG-GAGu | | ||| |||||| ||| uguaAGAAAAUGAUACUACGCUCu 2 19 1360 1383 [mm9:16:32300727-32300750:+] 0.5431 121 0 -12.01 -0.3358 MIMAT0000545 mmu-miR-98 70238 Rnf168 uuGUUAUGUUG-AAUGAUG-GAGu :|| | ||: |||||| ||| ugUAAGAAAAUGAUACUACGCUCu 2 21 1360 1383 [mm9:16:32300727-32300750:+] 0.5431 123 0 -11.36 -0.3386 MIMAT0000559 mmu-miR-326 70238 Rnf168 ugaccucCUUCCCGGGUCUCc ||| | ||||||| ---cauaGAAAGUCCCAGAGa 2 15 1 18 [mm9:16:32299368-32299385:+] 0.6728 154 7 -15.30 -0.7291 MIMAT0004642 mmu-miR-330 70238 Rnf168 cggauUCUGUGUCCGGGUCUCu | | | || ||||||| ----cAUAGAAAGUCCCAGAGa 2 18 1 18 [mm9:16:32299368-32299385:+] 0.6728 153 7 -20.19 -0.7291 MIMAT0000590 mmu-miR-342-3p 70238 Rnf168 ugcccACGCUAAAGACACACUCu || || |: ||||||| cuccaUGGCAUCUUGGUGUGAGa 2 19 1287 1309 [mm9:16:32300654-32300676:+] 0.5392 154 7 -16.50 -0.1959 MIMAT0000656 mmu-miR-139-5p 70238 Rnf168 gaccUCUGUGCACGUGACAUCu | |:| || |||||||| uuauACAUAAGUACACUGUAGc 2 19 946 967 [mm9:16:32300313-32300334:+] 0.5000 162 7 -15.23 -0.2797 MIMAT0000661 mmu-miR-214 70238 Rnf168 ugacggacAGACACGGACGACa ||| | ||||||| agcagcacUCU-UACCUGCUGa 2 15 1060 1080 [mm9:16:32300427-32300447:+] 0.5000 148 7 -16.63 -0.2739 MIMAT0000661 mmu-miR-214 70238 Rnf168 ugAC-GGA-CAGACACGGAC-GACa || ||| |||| ||||| ||| gaUGCCCUCUUCUG-GCCUGUCUGa 2 21 619 642 [mm9:16:32299986-32300009:+] 0.5000 124 0 -23.37 -0.1926 MIMAT0000666 mmu-miR-320 70238 Rnf168 agcgggagaguuggGUCGAAAa ||||||| auauuuagaguuuaCAGCUUUu 2 9 1263 1284 [mm9:16:32300630-32300651:+] 0.5392 140 7 -11.48 -0.5659 MIMAT0000671 mmu-miR-224 70238 Rnf168 uugccUUGGUGAUCAC-UGAAu |:|:|| |||| |||| aagacAGCUAC-AGUGUACUUa 2 17 642 662 [mm9:16:32300009-32300029:+] 0.5000 122 0 -15.51 -0.5351 MIMAT0000747 mmu-miR-382 70238 Rnf168 gcuuAGGUGGUGCUUGUUGAAg |:::::| | ||||||| aucuUUUGUUAAG-ACAACUUa 2 19 1523 1543 [mm9:16:32300890-32300910:+] 0.5431 148 7 -10.76 -0.4862 MIMAT0000766 mmu-miR-335-5p 70238 Rnf168 uguAAAAAGCA-AUAACG-AGAACu |||| | | || || ||||| agcUUUUCCCUCCAUGGCAUCUUGg 2 21 1278 1302 [mm9:16:32300645-32300669:+] 0.5392 123 0 -9.65 -0.1280 MIMAT0001081 mmu-miR-196b 70238 Rnf168 ggGUUGUUGUCCUUUGAUG-GAu :|| || | || ||||| || ugUAAGAAAAUGAUACUACGCUc 2 21 1360 1382 [mm9:16:32300727-32300749:+] 0.5431 128 0 -9.17 -0.6210 MIMAT0003182 mmu-miR-494 70238 Rnf168 cuccaaagggcacaUACAAAGu ||||||| gaagcauuguucaaAUGUUUCa 2 9 17 38 [mm9:16:32299384-32299405:+] 0.6728 140 7 -10.37 -1.0355 MIMAT0003188 mmu-miR-503 70238 Rnf168 gaCGUCAUGACAAGGGCGACGAu || ||| | |:||||||| ugGCUUUACCAUCCUCGCUGCUu 2 22 1397 1419 [mm9:16:32300764-32300786:+] 0.5431 161 7 -21.50 -0.3760 MIMAT0003727 mmu-miR-374 70238 Rnf168 gugaaucguccaacAUAAUAUa ||||||| aaaaaagauuuuauUAUUAUAc 2 9 930 951 [mm9:16:32300297-32300318:+] 0.5000 140 7 -3.08 -0.9714 MIMAT0003893 mmu-miR-761 70238 Rnf168 acacaGUCAAAGUGGGACGACg || | |:| ||||||| agcagCACUCUUA-CCUGCUGa 2 18 1060 1080 [mm9:16:32300427-32300447:+] 0.5000 151 7 -18.91 -0.2559 MIMAT0003893 mmu-miR-761 70238 Rnf168 acACAGUCAAAGUGGGA-CGACg || | | ||:||| |||| ccUGGCUUUACCAUCCUCGCUGc 2 21 1395 1417 [mm9:16:32300762-32300784:+] 0.5431 120 0 -17.70 -0.3920 MIMAT0003453 mmu-miR-497 70238 Rnf168 auguUUGGUGUCACA-CGACGAc |:::|||| | |||||| aauuAGUUACAGAAUAGCUGCUa 2 19 709 731 [mm9:16:32300076-32300098:+] 0.5004 126 6 -16.62 -1.0284 MIMAT0003456 mmu-miR-495 70238 Rnf168 uucUUCACG-UGGUACAAACAAa |: ||| | |||||||| aauAGCUGCUAGAUUGUUUGUUu 2 20 721 743 [mm9:16:32300088-32300110:+] 0.5004 150 7 -12.59 -0.8894 MIMAT0004869 mmu-miR-421 70238 Rnf168 cgCGGGUUAAUUACAGACA-ACUa |||| || | |||| ||| auGCCCUCUUCUGGCCUGUCUGAa 2 22 620 643 [mm9:16:32299987-32300010:+] 0.5000 121 0 -15.55 -0.2212 MIMAT0005850 mmu-miR-1192 70238 Rnf168 uuaaaccaGA-CAAACAAACAAa || | ||||||||| aauagcugCUAGAUUGUUUGUUu 2 15 721 743 [mm9:16:32300088-32300110:+] 0.5004 153 7 -11.95 -0.8961

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G062028 Rnf168 Mus musculus 70238 19536157 0 0 R47250; MOUSE$RNF168_01; Binding factors: mmu-miR-124-3p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rnf168 mmu-miR-204 beg:1758 end:1776 pic:3' TCCGTATCCTACTG---TTTCCCTT 5'& ||||| ||||||| &5' ---------ATGACCAAAAAGGGA- 3' Rnf168 mmu-miR-211 beg:1758 end:1776 pic:3' TCCGTTTCCTACTG---TTTCCCTT 5'& ||||| ||||||| &5' ---------ATGACCAAAAAGGGA- 3' Rnf168 mmu-miR-1186b beg:1098 end:1125 pic:3' CACCA---CGTACGGAAATTAGGGT 5'& |||| |.| |. |||||| &5' GTGGATTGGTAGGTAGGGAATCCC- 3' Rnf168 mmu-miR-1186b beg:511 end:534 pic:3' CACCA-CGTACGGAAATTAGGGT 5'& ||| ||| |.. ||||||| &5' --GGTCGCAAGTTCA-AATCCCA 3' Rnf168 mmu-miR-1186b beg:734 end:759 pic:3' CACCACGTACGGAAATTAGGGT 5'& |||| ||| ||||||||||||| &5' GTGGCGCACGCCTTTAATCCCA 3' Rnf168 mmu-miR-20astar beg:1566 end:1583 pic:3' GAAATTCACGAGCATTACGTCA 5'& || | ||||||||| &5' -------TGTCC-TAATGCAGT 3' Rnf168 mcmv-miR-m108-2-5p.2 beg:950 end:970 pic:3' CACTGGCGAGCGCTGCTCACT 5'& ||. ||| |||||||. &5' --GAT--CTCATTACGAGTGG 3' Rnf168 mmu-miR-20bstar beg:201 end:220 pic:3' GATCTTCACGAGTG--TGACGTCA 5'& || ||| |||||||| &5' -------TG-TCAATAACTGCAGT 3' Rnf168 mmu-miR-17star beg:210 end:233 pic:3' GATGTTCACGGGAGTGACGTCA 5'& ||.| ||||..|| | || | &5' CTGC-AGTGTTCTAAGTGTGG- 3' Rnf168 mcmv-miR-m59-1 beg:1049 end:1061 pic:3' GACTGCCAGCTCCGTGACGATT 5'& ||||||||. &5' -------------CACTGCTAG 3' Rnf168 mmu-miR-680 beg:2017 end:2028 pic:3' GGGGGTACAGTCGTCTACGGG 5'& |||||||. &5' -------------AGATGCCT 3' Rnf168 mmu-miR-1904 beg:1169 end:1188 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& |.||. | |||||||| &5' ----CTTCTT--GTAGCAGAAC 3' Rnf168 mmu-miR-101astar beg:198 end:216 pic:3' CGTAGTCGTGACAC-TATTGACT 5'& ||.||| ||||||| &5' -------CATTGTCAATAACTG- 3' Rnf168 mmu-miR-872star beg:1744 end:1762 pic:3' TCCTCCGATGACG--TTATCAAGT 5'& .||. ||||||||| &5' ---------TTGTGAAATAGTTCA 3' Rnf168 mmu-miR-217 beg:1568 end:1584 pic:3' AGGTCAGTCAAGGACTACGTCAT 5'& |||| |||||||. &5' ----------TCCTAATGCAGTG 3' Rnf168 mmu-miR-1186 beg:1005 end:1025 pic:3' GTAC-GGAAATTAAGGTCGTGAG 5'& | |||| |||||||| &5' ---GACCTTCAG---CAGCACTC 3' Rnf168 mmu-miR-1968 beg:486 end:505 pic:3' TCAGGTGGTAGGAATT--GTCGACGT 5'& ||. ||||||| &5' ---------TCTGAAGGTCAGCTGC- 3' Rnf168 mmu-miR-200a beg:1569 end:1586 pic:3' TGTAGCAATGGTC--TGTCACAAT 5'& || .||||||| &5' ---------CCTAATGCAGTGTT- 3' Rnf168 mmu-miR-214 beg:1016 end:1035 pic:3' TGACGGACAGACACGGACGACA 5'& || ||| ||||||| &5' ---GCAC-TCTTA-CCTGCTG- 3' Rnf168 mmu-miR-1966 beg:1515 end:1543 pic:3' CTGAGAGAGGACT-CGG--TCGAGGGAA 5'& ||.|||||.|||. |.| .||||| &5' GATTCTCTTCTGGTGTCTTGGCTCC--- 3' Rnf168 mmu-miR-1966 beg:477 end:509 pic:3' CTGA-GAGAGGACT--CGGTCGA-GGGAA 5'& |||| ||||.|||| |.||||| |.||| &5' GACTGCTCTTCTGAAGGTCAGCTGCTCTT 3' Rnf168 mmu-miR-24 beg:1025 end:1040 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||||| ||||||| &5' -----CCTGC-----TGAGCCA 3' Rnf168 mmu-miR-421 beg:1902 end:1913 pic:3' CGCGGGTTAATTACAGACAACTA 5'& |||||||| &5' ---------------CTGTTGAT 3' Rnf168 mmu-miR-300 beg:1420 end:1438 pic:3' CTTCTCTCGAACGGGAACGTAT 5'& | |.|.||| .||||||| &5' ---GTGGGTTTG-TCTTGCAT- 3' Rnf168 mmu-miR-130bstar beg:7 end:25 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& || |..|||||||||| &5' ------GC-ATGGGGAAAGAGT 3' Rnf168 mmu-miR-1971 beg:736 end:753 pic:3' AGAGTCGGGT-CGGAAATG 5'& .|| || ||||||| &5' ----GGCGCACGCCTTTA- 3' Rnf168 mmu-miR-141star beg:1690 end:1707 pic:3' AGGTTGTGACGTGA-CCTTCTAC 5'& ||| ||||||| &5' --------TGCTTTAGGAAGAT- 3' Rnf168 mmu-miR-1196 beg:1503 end:1522 pic:3' TCCGTCTCCGTCCATCTAAA 5'& |.|| || ||||||| &5' --GTAGTTTCA-GTAGATT- 3' Rnf168 mcmv-miR-m01-2star beg:1334 end:1349 pic:3' AGCTTCCTTTGGC-ACAGCTTGC 5'& |.| |||||||| &5' ----------CTGCTGTCGAAC- 3' Rnf168 mmu-miR-342-3p beg:1246 end:1265 pic:3' TGCCCACGCTAAAGACACACTCT 5'& || || |. |||||||| &5' ------GC-ATCTTGGTGTGAGA 3' Rnf168 mmu-miR-2138 beg:369 end:389 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& | |.|| |||||||| &5' ----CACTAATTA-GTTCCCTT 3' Rnf168 mcmv-miR-m01-1 beg:1651 end:1675 pic:3' GGCAAGCTGCAAT---AAGAGGAGA 5'& |.|.| ||.|||||| &5' ----TTGGCAATTTTTTTTTCCTCT 3' Rnf168 mcmv-miR-m01-1 beg:1950 end:1970 pic:3' GGCAAGCTGCAAT-AAGAGGAGA 5'& .|| ||.||||| &5' -----TGAACTGCTTTTTCCTC- 3' Rnf168 mcmv-miR-m01-3 beg:1343 end:1362 pic:3' AGCTCCGTTGTC-AGCGAAGTGGC 5'& |||| | ||||.||| &5' -------AACACCTGGCTTTACC- 3' Rnf168 mcmv-miR-m108-1 beg:1129 end:1149 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& || |.|.|. ||||||| &5' -GA-ATGGGTAA---TCAGAAA 3' Rnf168 mcmv-miR-m22-1 beg:7 end:20 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& | |.|||||| &5' ------------GCATGGGGAA 3' Rnf168 mcmv-miR-M23-2 beg:994 end:1016 pic:3' GGC-GAAC-TGGCTCC-GGGGGTA 5'& | .||| ||. ||| ||..|| &5' --GATTTGAACTTAGGACCTTCA- 3' Rnf168 mcmv-miR-M44-1 beg:2002 end:2025 pic:3' TGGCGCCGAGACC-TTTTTCTAT 5'& .|| | |.|| ||||||||. &5' --TGCAGATTTGAAAAAAAGATG 3' Rnf168 mcmv-miR-m88-1 beg:771 end:791 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& ||.| |.|| ||.||||| &5' AGGCA--GGCA--GATTTCTG 3' Rnf168 mghv-miR-M1-3 beg:1013 end:1031 pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& |||.| || ||.|||| &5' ----GCAGCA-CT-CTTACCT- 3' Rnf168 mghv-miR-M1-6 beg:380 end:399 pic:3' TTTTGGTGGAGTGTGTCAAAGT 5'& .| |||. ||.|||||.| &5' ----TC-CCTT-CATAGTTTTA 3' Rnf168 mmu-let-7a beg:834 end:862 pic:3' TTGATATGT-----TGGATGATGGAGT 5'& ..||||||| ||| ||.||||| &5' GGCTATACAGAGAAACC--CTGCCTCA 3' Rnf168 mmu-let-7b beg:841 end:862 pic:3' TTGGTGTG-TTGGATGATGGAGT 5'& || | |||| ||.||||| &5' ---CAGAGAAACC--CTGCCTCA 3' Rnf168 mmu-let-7c beg:841 end:862 pic:3' TTGGTATG-TTGGATGATGGAGT 5'& || |||| ||.||||| &5' ---CAGAGAAACC--CTGCCTCA 3' Rnf168 mmu-let-7d beg:845 end:861 pic:3' TTGATACGTTGGATGATGGAGA 5'& | |||| ||.|||| &5' ------GAAACC--CTGCCTC- 3' Rnf168 mmu-let-7e beg:838 end:862 pic:3' TTGATATGTTG----GAGGATGGAGT 5'& |||||||. | |||.||||| &5' --CTATACAGAGAAAC-CCTGCCTCA 3' Rnf168 mmu-let-7f beg:851 end:862 pic:3' TTGATATGTTAGATGATGGAGT 5'& ||.||||| &5' --------------CTGCCTCA 3' Rnf168 mmu-let-7g beg:844 end:862 pic:3' TTGACATGTTTGATGATGGAGT 5'& | |||| ||.||||| &5' ------AGAAACC-CTGCCTCA 3' Rnf168 mmu-let-7i beg:840 end:862 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |||| | |||| ||.||||| &5' -ACAG-AGAAACC-CTGCCTCA 3' Rnf168 mmu-miR-1186 beg:743 end:765 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& ||||||||| ||||||||| &5' ---GCCTTTAATCCCAGCACTC 3' Rnf168 mmu-miR-1186b beg:1184 end:1203 pic:3' CACCACGTACG-GAAATTAGGGT 5'& ||| | |||||||||| &5' ------CATTCTCTTTAATCCC- 3' Rnf168 mmu-miR-1186b beg:2032 end:2053 pic:3' CACCACGTACGGAAATTAGGGT 5'& ||| || |||| |||.||| &5' -TGGCACA-GCCT--AATTCCA 3' Rnf168 mmu-miR-1191 beg:832 end:857 pic:3' ATCCCGATGTA--TCATTCTGAC 5'& |||||||.| || || ||| &5' -AGGGCTATACAGAGAAACCCTG 3' Rnf168 mmu-miR-1196 beg:765 end:788 pic:3' TCCGTCTCCGTCCATCTAAA 5'& ||||||||||||| |||||| &5' AGGCAGAGGCAGGCAGATTT 3' Rnf168 mmu-miR-1197 beg:49 end:72 pic:3' TCTTC-ATCTGGTACACAGGAT 5'& ||| ||| | ||||||| &5' --AAGCTAGCTCTTCTGTCCTA 3' Rnf168 mmu-miR-1198 beg:792 end:815 pic:3' GGTTCGGTCGGTCCTTGTGTAT 5'& | |.||||||| || .||| &5' CGAGGCCAGCCTGGTCTACA-- 3' Rnf168 mmu-miR-1198 beg:604 end:624 pic:3' GGTTCGGTCGGTCCT-TGTGTAT 5'& |||. |||.||| &5' ------CAGTGTACTTACATATA 3' Rnf168 mmu-miR-1199 beg:1364 end:1386 pic:3' GGCG-CGC-TGGCCCTGAGTCT 5'& ||| || ||.|| |||||| &5' -CGCTGCTTACTGG--CTCAGA 3' Rnf168 mmu-miR-124star beg:1546 end:1562 pic:3' TAGTTCCAGGCGACACTTGTGC 5'& |.| |||||||||. &5' -------TTC-CTGTGAACAT- 3' Rnf168 mmu-miR-127star beg:1496 end:1516 pic:3' TAGTCTCGGGAGAC-TCGAAGTC 5'& ||| ||| ||.||||| &5' -----AGCAAGCTGTAGTTTCAG 3' Rnf168 mmu-miR-129-5p beg:849 end:866 pic:3' CGTTCGGGTCTGGCGTTTTTC 5'& ||| .|| |||||| &5' -----CCCT-GCCTCAAAAA- 3' Rnf168 mmu-miR-130b beg:1423 end:1439 pic:3' TACGGGAAAGTAGTAACGTGAC 5'& || || |||||.| &5' -------TTTGTC-TTGCATT- 3' Rnf168 mmu-miR-135b beg:1027 end:1041 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& || .|||||| &5' -----------TGCTGAGCCAT- 3' Rnf168 mmu-miR-139-5p beg:902 end:922 pic:3' GACCTCTGTG--CACGTGACATCT 5'& |||. || |||||||| &5' ------ACATAAGTACACTGTAG- 3' Rnf168 mmu-miR-141 beg:1565 end:1586 pic:3' GGTAGAAATGGTC--TGTCACAAT 5'& || || .||||||| &5' ----CTGT-CCTAATGCAGTGTT- 3' Rnf168 mmu-miR-143 beg:1222 end:1245 pic:3' CTC-GATGTCACGAAGTAGAGT 5'& ||| .||||| .||| ||| &5' GAGTTTACAGCTTTTCC-CTC- 3' Rnf168 mmu-miR-143 beg:2054 end:2078 pic:3' CTCGATGTCACGAA---GTAGAGT 5'& | | || || ||||||| &5' --GTCAGAG-GCAAGGGCATCTCA 3' Rnf168 mmu-miR-146a beg:2062 end:2085 pic:3' TTGGGTACCT-TA-AGTCAAGAGT 5'& || ||. || ||||||||.| &5' ----CAAGGGCATCTCAGTTCTTA 3' Rnf168 mmu-miR-146b beg:2060 end:2085 pic:3' TCGGATACCTTA-AGTCAAGAGT 5'& .|| || || ||||||||.| &5' GGCAAG-GGCATCTCAGTTCTTA 3' Rnf168 mmu-miR-151-3p beg:790 end:813 pic:3' GGAGTTCC--TCGGAGTCAGATC 5'& .||.||| ||||| .||||| &5' -TTCGAGGCCAGCCT-GGTCTA- 3' Rnf168 mmu-miR-15b beg:666 end:687 pic:3' ACATTTGGTACTACACGACGAT 5'& || || || ||||||| &5' -GTTA--CA-GAATAGCTGCTA 3' Rnf168 mmu-miR-16star beg:1010 end:1035 pic:3' AGTCGTCGTGTCAGTT-ATGACC 5'& |||||||||| |.| |.||| &5' TCAGCAGCACTCTTACCTGCTG- 3' Rnf168 mmu-miR-17star beg:901 end:922 pic:3' GATGTTCACGGGAGTGACGTCA 5'& |||| |. |||||.|| &5' -TACATAAGTA--CACTGTAG- 3' Rnf168 mmu-miR-182 beg:186 end:210 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& || |||. ||||||.||| &5' -GGGAATTGTTT--CCATTGTCAA- 3' Rnf168 mmu-miR-1839-5p beg:1461 end:1483 pic:3' GTTCTGGACAAGATAGATGGAA 5'& |||| .|| || ||||.||| &5' CAAG--TTGAGCT-TCTATCTT 3' Rnf168 mmu-miR-184 beg:53 end:70 pic:3' TGGGAATAGTCAAG-AGGCAGGT 5'& .|| || ||.|||| &5' --------TAGCTCTTCTGTCC- 3' Rnf168 mmu-miR-1896 beg:829 end:850 pic:3' GAGGAGTGGG--TGGTA-GTCTCTC 5'& .|| .|.|| |||||| &5' ------GCCAGGGCTATACAGAGA- 3' Rnf168 mmu-miR-18a beg:217 end:239 pic:3' GATAGACGTGA-TCTA--CGTGGAAT 5'& ||. || || |||.||| &5' -----TGTTCTAAGTGTGGCATCTT- 3' Rnf168 mmu-miR-1904 beg:1196 end:1217 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& |||||..| || |||||| &5' --TCCCTTTA-AGTGGCAGAA- 3' Rnf168 mmu-miR-193 beg:256 end:266 pic:3' TGACCCTGAAACATCCGGTCAA 5'& ||.|||| &5' --------------GGTCAGT- 3' Rnf168 mmu-miR-1933-5p beg:1143 end:1167 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& |||||..| || ||||. |||| &5' AAACTGGGTCC-AACATG--GACT 3' Rnf168 mmu-miR-1933-5p beg:1230 end:1251 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& |.|| || | |||||.| &5' -AGCTTTT-CC---CTCCATGGC- 3' Rnf168 mmu-miR-1934 beg:921 end:942 pic:3' TCTCCTGCTTCGTCCC-CTGGTCT 5'& ||| ||| ||||||| &5' ----GACTT--CAGACAGACCAGA 3' Rnf168 mmu-miR-1934 beg:763 end:785 pic:3' TCTCCTGCTTCGTCCCCTGGTCT 5'& .|||| ||.||||| |||| &5' GGAGGCAGAGGCAGG----CAGA 3' Rnf168 mmu-miR-1937a beg:979 end:999 pic:3' ACCC-CCGAGCAGGCCCTAA 5'& | | ||.| | |.|||||| &5' -GTGTGGTT-G-CTGGGATT 3' Rnf168 mmu-miR-1937a beg:1439 end:1449 pic:3' ACCCCCGAGCAGGCCCTAA 5'& |.||||| &5' -----------CTGGGAT- 3' Rnf168 mmu-miR-1944 beg:1389 end:1410 pic:3' TTAGTCTTGAAC-TGTAAGTCGTGTCTC 5'& .|||| |..| ||||||| &5' -------GCTTGTATGTGC-GCACAGA- 3' Rnf168 mmu-miR-1948 beg:2023 end:2048 pic:3' GACA-TGCTCACGAGACGGATTT 5'& ||| |.|| || | |||||| &5' CTGGCATGATGGCACAGCCTAA- 3' Rnf168 mmu-miR-1949 beg:1782 end:1804 pic:3' TTGATACGAC-TGTAGG-----ACCATATC 5'& | ||||.| |||||||| &5' ---------GAACATTCCTGTATGGTATAG 3' Rnf168 mmu-miR-195 beg:677 end:687 pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||| &5' --------------GCTGCTA 3' Rnf168 mmu-miR-1955 beg:980 end:999 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& || || | ||||||.| &5' ------TGTGGT---TGCTGGGATT 3' Rnf168 mmu-miR-1955 beg:1426 end:1449 pic:3' TTTTCGACGTCACGTA---GGACCCTGA 5'& .||. ||||| |||||||. &5' -----TTGTCTTGCATTACCCTGGGAT- 3' Rnf168 mmu-miR-1960 beg:496 end:520 pic:3' TCGG-GAGAAGATTGTC-GTGACC 5'& |||. |||||||.| .| |.| &5' AGCTGCTCTTCTGAAGGTCGC--- 3' Rnf168 mmu-miR-1961 beg:847 end:862 pic:3' AAGATTGATGATGGAGT 5'& ||| ||.||||| &5' ----AACC-CTGCCTCA 3' Rnf168 mmu-miR-1968 beg:665 end:685 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |||. || ||.|||||| &5' AGTTA--CAG----AATAGCTGC- 3' Rnf168 mmu-miR-1969 beg:1460 end:1483 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& .|| ||| .|| ||.||||| &5' --TCAAGTT-GAGCTTCTATCTT 3' Rnf168 mmu-miR-1969 beg:1524 end:1547 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& |. .||| .| ||||||.| &5' -CTGGTGTCTTGG-CTCCATTT- 3' Rnf168 mmu-miR-1970 beg:1033 end:1055 pic:3' GTTTCGGATAGGG--GTCACTGTGT 5'& .|||| |||.| ||| ||| &5' --GAGCC-ATCTCTACAGCCCCAC- 3' Rnf168 mmu-miR-19astar beg:40 end:58 pic:3' CATCACGTTGATACGTTTTGAT 5'& ||.| ||||||.||| &5' ----TGTAT---TGCAAAGCTA 3' Rnf168 mmu-miR-200a beg:202 end:223 pic:3' TGTAGCAA-TGGTCTGTCACAAT 5'& .|| ||. .||||||| &5' --GTCAATAACT--GCAGTGTT- 3' Rnf168 mmu-miR-201 beg:1078 end:1101 pic:3' TTCTTGTTACGGAA-TGACTCAT 5'& ||||. || .||||||. &5' AAGAGTG--GCATGGGCTGAGTG 3' Rnf168 mmu-miR-203 beg:397 end:414 pic:3' GATCACCAGGATTTGTAAAGTG 5'& |.||||.|||||.| &5' -------TTCTAAGCATTTTA- 3' Rnf168 mmu-miR-205 beg:1088 end:1114 pic:3' GTCTGAG--GCCACCTTACT-TCCT 5'& .|.|| .|||||| ||. ||| &5' -GGGCTGAGTGGTGGATTGGTAGG- 3' Rnf168 mmu-miR-20bstar beg:909 end:922 pic:3' GATCTTCACGAGTGTGACGTCA 5'& .||||||.|| &5' -----------TACACTGTAG- 3' Rnf168 mmu-miR-212 beg:1048 end:1068 pic:3' ACCGGCACTGACC-TCTGACAAT 5'& || |||| |||.||||| &5' ---CCCC-ACTGCTAGATTGTTA 3' Rnf168 mmu-miR-2134 beg:809 end:831 pic:3' CGTGGGGCAA--AGGGTTCTG 5'& .|| || |.|||.||| &5' -TACAGAGTGAGTTCCAGGAC 3' Rnf168 mmu-miR-2135 beg:1149 end:1169 pic:3' CAAAGCCGGGGT---TCTGGAGA 5'& ||.|| .|||.|| &5' -----GGTCCAACATGGACTTC- 3' Rnf168 mmu-miR-2141 beg:274 end:287 pic:3' TTGAAAAGACTGTGGAGGA 5'& || |||.||| &5' --------TGCCACTTCC- 3' Rnf168 mmu-miR-2145 beg:828 end:858 pic:3' TTGGTCCGGGC---------TGGGACGA 5'& |.||||| |. ||||||| &5' AGCCAGGGCTATACAGAGAAACCCTGC- 3' Rnf168 mmu-miR-2146 beg:839 end:861 pic:3' GTGTACC-TTGGGAA-GAGGTG 5'& .||| | |||||| ||| &5' TACAGAGAAACCCTGCCTC--- 3' Rnf168 mmu-miR-214star beg:761 end:783 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& |.| |.| ||.|||||| &5' ---CGGGAGGCAGAGGCAGGCA 3' Rnf168 mmu-miR-214star beg:344 end:362 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& .||| |||||.| &5' -------GAGTCCACACAGGTA 3' Rnf168 mmu-miR-215 beg:479 end:500 pic:3' CAGAC-AGTTTAGTA-TCCAGTA 5'& ||| || || |||||| &5' --CTGCTCT--TCTGAAGGTCA- 3' Rnf168 mmu-miR-216a beg:104 end:126 pic:3' AGTGTCAACGGTC----GACTCTAAT 5'& ||||. |||||.|| &5' ------TTGCTTACTCTCTGAGGTT- 3' Rnf168 mmu-miR-2183 beg:1068 end:1082 pic:3' TCCTCCAGTCCCCAAGTT 5'& || |||||.|| &5' -------CAAGGGTTTAA 3' Rnf168 mmu-miR-219 beg:1827 end:1847 pic:3' TCTTAACGCAAACCTGTTAGT 5'& |||. |||.|||||| &5' ----TTGTCCGTGGGCAATCA 3' Rnf168 mmu-miR-22star beg:125 end:145 pic:3' ATTTCGAACGGTGA---CTTCTTGA 5'& |..|| ||||||.| &5' --------GTTACAAAGGAAGAATT 3' Rnf168 mmu-miR-22star beg:1766 end:1787 pic:3' ATTTCGAAC-GGTGACTTCTTGA 5'& |||| | |.| ||||||| &5' -AAAGG--GACTAA-GAAGAAC- 3' Rnf168 mmu-miR-23a beg:1244 end:1263 pic:3' CCTTTAGGGACCGT-----TACACTA 5'& ||||| .||||| &5' ---------TGGCATCTTGGTGTGA- 3' Rnf168 mmu-miR-24 beg:774 end:795 pic:3' GACAAGGACGACTT--GACTCGGT 5'& | || || |||||.. &5' -----CAGGCAGATTTCTGAGTT- 3' Rnf168 mmu-miR-24-2star beg:1095 end:1116 pic:3' TGACAAAGTCGAGTCATCCGTG 5'& || ..| | |||||.| &5' ---GTGGTGGATTGGTAGGTA- 3' Rnf168 mmu-miR-27a beg:1540 end:1559 pic:3' CGCCTTGAATCGGTGACACTT 5'& |.||| . ||||||| &5' -----ATTTATTTCCTGTGAA 3' Rnf168 mmu-miR-27astar beg:93 end:120 pic:3' ACGAGT-GTTCGT-CGATTC-GGGA 5'& ||||| ||||| ||| |.|| &5' -GCTCAGCAAGCTTGCTTACTCTCT 3' Rnf168 mmu-miR-27b beg:1540 end:1559 pic:3' CGTCTTGAATCGGTGACACTT 5'& |.||| . ||||||| &5' -----ATTTATTTCCTGTGAA 3' Rnf168 mmu-miR-27bstar beg:774 end:796 pic:3' CAAGTGGTTAGTC----GATTCGAGA 5'& ||. ||| ||.||.|| &5' ------CAGGCAGATTTCTGAGTTC- 3' Rnf168 mmu-miR-28 beg:1157 end:1178 pic:3' GAGTTATCTGACACTCGAGGAA 5'& ||.|||| .|||.||| &5' ----ATGGACTTCAGGCTTCTT 3' Rnf168 mmu-miR-297b-5p beg:606 end:624 pic:3' TGTACAAGTACGTG--TGTATGTA 5'& .||.|| |||||.| &5' --------GTGTACTTACATATA- 3' Rnf168 mmu-miR-29bstar beg:793 end:805 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& ||..||||| &5' -------------GAGGCCAGC 3' Rnf168 mmu-miR-302a beg:398 end:420 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& .| ||.||| ||||.|| &5' ---TCTAAGCATTTTAGCATTT- 3' Rnf168 mmu-miR-302b beg:424 end:445 pic:3' GATGATTTTGTACC-TTCGTGAAT 5'& |.|||||.| || |||.|. &5' --ATTAAAATA-GGTAAGTAT--- 3' Rnf168 mmu-miR-302b beg:399 end:420 pic:3' GATGATTTTGTACCTTCGTGAAT 5'& || ||.||| ||||.|| &5' ---CT-AAGCATTTTAGCATTT- 3' Rnf168 mmu-miR-302d beg:396 end:420 pic:3' TGTGAG-TTTGTACCTTCGTGAAT 5'& |.|| ||.||| ||||.|| &5' --ATTCTAAGCATTTTAGCATTT- 3' Rnf168 mmu-miR-30estar beg:1110 end:1130 pic:3' CGACATTTG-TAGGCTGACTTTC 5'& |||.. |||| |||.|| &5' ---GTAGGGAATCC--CTGGAA- 3' Rnf168 mmu-miR-30estar beg:434 end:455 pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||||..||| |||||.|. &5' ---GTAAGTATCGGACTGGAG- 3' Rnf168 mmu-miR-328 beg:823 end:842 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& ||| ||| |||||.| &5' -----AGGACAGCCAGGGCTA- 3' Rnf168 mmu-miR-328 beg:761 end:784 pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||.| |||||||. | ||| &5' -CGGGA-GGCAGAGGCAGGCAG 3' Rnf168 mmu-miR-330star beg:1876 end:1898 pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||||||. ||.|| ||.| &5' TCTCTGTTAGCTCTCTGTT---- 3' Rnf168 mmu-miR-33 beg:596 end:615 pic:3' ACGTTAC-GTTGATGTTACGTG 5'& | ||.|||||.||.|| &5' ------GACAGCTACAGTGTAC 3' Rnf168 mmu-miR-337-3p beg:1083 end:1099 pic:3' TCCGTAGTATATCCTCGACTT 5'& ||||| |.|||||. &5' -GGCAT-------GGGCTGAG 3' Rnf168 mmu-miR-338-3p beg:902 end:925 pic:3' GTTGT-TTTA-GTGACTACGACCT 5'& ||| ||.| ||||| |||| &5' --ACATAAGTACACTGTAGCTG-- 3' Rnf168 mmu-miR-344 beg:939 end:957 pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& || .||. .|||||| &5' --AGA-GGGTA----TTAGATC- 3' Rnf168 mmu-miR-3470a beg:797 end:821 pic:3' GGTCGGACCAGATGTTTCACT 5'& |||||||||||||||.||||| &5' CCAGCCTGGTCTACAGAGTGA 3' Rnf168 mmu-miR-3470b beg:797 end:821 pic:3' GGTCGGACCAGATGTCTCACT 5'& ||||||||||||||||||||| &5' CCAGCCTGGTCTACAGAGTGA 3' Rnf168 mmu-miR-3471 beg:941 end:960 pic:3' TTACGGAATGTCAAC--CTAGAGT 5'& | .|| ||||||| &5' --------AGGGTATTAGATCTCA 3' Rnf168 mmu-miR-3473 beg:1028 end:1048 pic:3' CCGACTCGGTAGAGAGGT 5'& |||||||||||||| || &5' -GCTGAGCCATCTCTACA 3' Rnf168 mmu-miR-34a beg:1043 end:1060 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |||| ||||||.| &5' -----CAGCCC---CACTGCTA 3' Rnf168 mmu-miR-34b-3p beg:1691 end:1713 pic:3' CTACCGTCA-CC-TCAATCACTAA 5'& || || || ||||||| &5' ----GCTTTAGGAAGATAGTGAT- 3' Rnf168 mmu-miR-365 beg:939 end:953 pic:3' TATTCCTAAAAATC-CCCGTAAT 5'& || |||.|||| &5' ------------AGAGGGTATTA 3' Rnf168 mmu-miR-376astar beg:131 end:148 pic:3' TGAGTATCTTCC-TCTTAGATGG 5'& |||| |||||.||| &5' --------AAGGAAGAATTTAC- 3' Rnf168 mmu-miR-379 beg:1806 end:1825 pic:3' GGATGCAAG-GTATCAGATGGT 5'& |||. .||| |.||||| &5' -----GTTTATATA-TTTACCA 3' Rnf168 mmu-miR-431 beg:812 end:831 pic:3' ACGTACTGCCGGACGTTCTGT 5'& | .||| | | ||.|||| &5' -GAGTGA-GTTC--CAGGACA 3' Rnf168 mmu-miR-432 beg:1150 end:1171 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |.||| |||.||.| &5' --GTCCAACATGG-ACTTCAGG- 3' Rnf168 mmu-miR-452 beg:1998 end:2011 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& || ||||.|. &5' -----------CTGTGCAGAT- 3' Rnf168 mmu-miR-466b-5p beg:602 end:623 pic:3' GTACATGT-ACATGTGTGTGTAG 5'& |||| ||||| .|||.|| &5' ----TACAGTGTACTTACATAT- 3' Rnf168 mmu-miR-467a beg:597 end:618 pic:3' GCGTATATGTAC--GTC-CGTGAAT 5'& ||| ||| |.||||| &5' -------ACAGCTACAGTGTACTTA 3' Rnf168 mmu-miR-467b beg:600 end:619 pic:3' GTATATGTACGTC-CGTGAATG 5'& .| ||| |.|||||| &5' -----GCTA-CAGTGTACTTAC 3' Rnf168 mmu-miR-467c beg:1385 end:1407 pic:3' GTGTAT--ATGTACGTGCGTGAAT 5'& |||||. |..||| ||||| &5' CACATGCTTGTATGTGCGCAC--- 3' Rnf168 mmu-miR-469 beg:2047 end:2066 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& ||| | ||| ||||||| &5' -----CCAG---C-ATGTCAGAGGCA 3' Rnf168 mmu-miR-469 beg:757 end:779 pic:3' CCTGTG-GTTCTAGTTACTTTCTCCGT 5'& .||| |..|| |. ||||||| &5' --GCACTCGGGA-----GGCAGAGGCA 3' Rnf168 mmu-miR-470 beg:810 end:830 pic:3' TGAGTGGTCACGGTC-AGGTTCTT 5'& ||| |. || ||||.|| &5' ------CAGAGTGAGTTCCAGGA- 3' Rnf168 mmu-miR-490 beg:1851 end:1872 pic:3' GTCGTACCTCAG--GAGGTCCAAC 5'& || |||. .|.|||||| &5' -----TGAAGTTGTTTTCAGGTT- 3' Rnf168 mmu-miR-493 beg:735 end:753 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& ||||.||| .||||.| &5' --TGGCGCAC------GCCTTTA 3' Rnf168 mmu-miR-493 beg:253 end:275 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& |.|||. ||||| |.||||| &5' CTTGGT---CAGTAC-ATCTTCA 3' Rnf168 mmu-miR-495 beg:677 end:699 pic:3' TTCTTCACG-TGGT---ACAAACAAA 5'& || .|.| ||||||||| &5' -------GCTGCTAGATTGTTTGTTT 3' Rnf168 mmu-miR-503 beg:1355 end:1374 pic:3' GACGTCATGACAAGG-GCGACGAT 5'& ||| ||| ||||||| &5' ------TACCA-TCCTCGCTGCT- 3' Rnf168 mmu-miR-511 beg:2050 end:2066 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| |. |.||||| &5' -----GCAT-GTCAGAGGCA- 3' Rnf168 mmu-miR-540-3p beg:821 end:841 pic:3' GGTCCTAGCTGGAGACTGGA 5'& |||||| | .|| |.|. &5' CCAGGA-CAGCCAG-GGCT- 3' Rnf168 mmu-miR-540-3p beg:576 end:592 pic:3' GGTCCTAGCTGGAGACTGGA 5'& | |.||||.||| &5' -------CCTCTTCTGGCCT 3' Rnf168 mmu-miR-541 beg:1184 end:1205 pic:3' TCACACTGGTTGTAGTC----TTAGGGAA 5'& |||||. |||||||| &5' ---------AACATTCTCTTTAATCCCTT 3' Rnf168 mmu-miR-544 beg:1199 end:1217 pic:3' CTCGAACGATTTTTA-CGTCTTA 5'& || ||.| |||||| &5' -------CTTTAAGTGGCAGAA- 3' Rnf168 mmu-miR-544 beg:1167 end:1187 pic:3' CTCGAACGATTTTTACGTCTTA 5'& .|||| || |||||| &5' -GGCTT-CTTGTA--GCAGAA- 3' Rnf168 mmu-miR-654-5p beg:1382 end:1408 pic:3' TGTGTACAAGACGT-CGAATG-GT 5'& ||||||| .||.| |. .| || &5' ACACATGC-TTGTATGTGCGCACA 3' Rnf168 mmu-miR-654-5p beg:1358 end:1378 pic:3' TGTGTACAAGACGTCGAATGGT 5'& || ||| || || ||||||. &5' AC-CATCCTC-GCTGCTTACT- 3' Rnf168 mmu-miR-666-5p beg:1820 end:1838 pic:3' CCGAGAGT-GTCGACACGGGCGA 5'& || |||.| ||.|||. &5' ------CACCAGTT-TGTCCGT- 3' Rnf168 mmu-miR-669e beg:812 end:831 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& || . |. | ||.|||| &5' --GAGTGAGTT--C-CAGGACA 3' Rnf168 mmu-miR-669g beg:592 end:614 pic:3' TAGTACAGTTGTGTATGTTACGT 5'& || || .||| ||||.||.| &5' -TC-TGAAGACAGCTACAGTGTA 3' Rnf168 mmu-miR-669i beg:1385 end:1403 pic:3' CATACGTACACACATATACGT 5'& |||| |||||.||| &5' -----CATGCTTGTATGTGC- 3' Rnf168 mmu-miR-669j beg:1385 end:1403 pic:3' ACAAACGTACACTCATATACGT 5'& |||| ||||.||| &5' ------CATGCTTGTATGTGC- 3' Rnf168 mmu-miR-671-5p beg:1159 end:1178 pic:3' GAGGTCGGGGAGGTCCCGAAGGA 5'& .| ||.|| ||||||.| &5' ----GGA--CTTCA-GGCTTCTT 3' Rnf168 mmu-miR-680 beg:252 end:281 pic:3' GGGGGTACAGTC--------GTCTACGGG 5'& ||... ||||| |||.|||| &5' -CCTTG-GTCAGTACATCTTCAGGTGCC- 3' Rnf168 mmu-miR-686 beg:2050 end:2066 pic:3' AGAAGTG-GCAGACCCTTCGTTA 5'& .| .||| ||.|||| &5' -----GCATGTCA--GAGGCAA- 3' Rnf168 mmu-miR-686 beg:757 end:774 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& |||. ||||.|||. &5' ----CACTC---GGGAGGCAG- 3' Rnf168 mmu-miR-688 beg:1548 end:1558 pic:3' CTTATTCATCAGCGGACGCT 5'& ||||.|| &5' -------------CCTGTGA 3' Rnf168 mmu-miR-693-3p beg:1041 end:1066 pic:3' AATGTCGGTGTAGACTTTC-GACG 5'& ||||||| || ||| || .||. &5' -TACAGCCCCA-CTGCTAGATTGT 3' Rnf168 mmu-miR-693-3p beg:1984 end:2005 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||| ||. |||||||. &5' TTAGAGTATT-----AAAGCTGT 3' Rnf168 mmu-miR-696 beg:0 end:15 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||| ||||| .||.| &5' -CCA-AGCAAA-GCATG- 3' Rnf168 mmu-miR-696 beg:527 end:545 pic:3' GGGTGTCGTTCGTGTGCG 5'& || |||||| ||||.| &5' -CC-CAGCAACCACATG- 3' Rnf168 mmu-miR-706 beg:1863 end:1884 pic:3' AAAAAACTCTGTCC------CAAAGAGA 5'& |||| |||||||| &5' ----------CAGGTTTTTAGTTTCTCT 3' Rnf168 mmu-miR-708 beg:1158 end:1178 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.|| |.|||.||| &5' ------TGGACTTCAGGCTTCTT 3' Rnf168 mmu-miR-713 beg:600 end:614 pic:3' CGACACACGGAAGTCACGT 5'& ||. |||||.| &5' -------GCTA-CAGTGTA 3' Rnf168 mmu-miR-742 beg:1573 end:1594 pic:3' AAATGGGTCGTACCACCGAAAG 5'& |. |||..| |||||||. &5' ---ATGCAGTGTT-TGGCTTTT 3' Rnf168 mmu-miR-743a beg:678 end:702 pic:3' AGATGAGTCGAACC-ACAGAAAG 5'& ||.|| || ||| |||.|||. &5' -CTGCT-AGATTGTTTGTTTTTT 3' Rnf168 mmu-miR-758 beg:119 end:136 pic:3' ATCACCTGGTCCAGTGTTT 5'& || |||.||||| &5' ----GGTTT-GGTTACAAA 3' Rnf168 mmu-miR-758 beg:510 end:523 pic:3' ATCACCTGGTCCAGTGTTT 5'& |||||.|||. &5' ---------AGGTCGCAAG 3' Rnf168 mmu-miR-759 beg:1330 end:1341 pic:3' CAGTTTTAACAAACGTGAGACG 5'& |.|||||| &5' --------------CGCTCTGC 3' Rnf168 mmu-miR-761 beg:1014 end:1035 pic:3' ACACAGTCAA-AGTG-GGACGACG 5'& | ||| || ||||||| &5' ---G-CAGCACTCTTACCTGCTG- 3' Rnf168 mmu-miR-767 beg:589 end:614 pic:3' AC-GAG-TCTGTTGGTACCACGT 5'& | || |||||.|.| |||.| &5' -GTCTGAAGACAGCTACAGTGTA 3' Rnf168 mmu-miR-767 beg:789 end:810 pic:3' ACGAG-TCT-GTTGGTACCACGT 5'& |.|| ||. ||.|| |||| &5' -GTTCGAGGCCAGCC-TGGT--- 3' Rnf168 mmu-miR-767 beg:818 end:840 pic:3' ACGAG--TCTGTTGGTACCACGT 5'& |.|| .||||.||| || || &5' -GTTCCAGGACAGCCA-GG-GC- 3' Rnf168 mmu-miR-770-3p beg:528 end:554 pic:3' GGTCGA-GGTGCAGT-CCGGGTGC 5'& ||||| |||| |||.||| &5' CCAGCAACCACATGATGGCTCAC- 3' Rnf168 mmu-miR-7a beg:351 end:369 pic:3' TGTTGTTTTAGTGATC--AGAAGGT 5'& ||| .| ||||||| &5' ----------CACAGGTATCTTCCA 3' Rnf168 mmu-miR-7b beg:351 end:369 pic:3' TGTTGTTTTAGTGTTC--AGAAGGT 5'& ||||.| ||||||| &5' ----------CACAGGTATCTTCCA 3' Rnf168 mmu-miR-804 beg:535 end:555 pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& ||| || | .|||||| &5' -CCACATG----ATGGCTCACA 3' Rnf168 mmu-miR-871 beg:772 end:794 pic:3' GTACTGACCGTGATTAGACTTAT 5'& |.| |||| |||||.| &5' ---GGCAGGCAGATTTCTGAGT- 3' Rnf168 mmu-miR-875-3p beg:1854 end:1870 pic:3' GTATCGGAGTC-ATAAAAGTCC 5'& || |.|||||||| &5' ---------AGTTGTTTTCAGG 3' Rnf168 mmu-miR-877 beg:1651 end:1676 pic:3' GGGACGCGGT------AGAGGAGATG 5'& |.|| || |.||||||| &5' -CTTG-GCAATTTTTTTTTCCTCTA- 3' Rnf168 mmu-miR-877 beg:568 end:587 pic:3' GGGAC-GCGGTAGAGGAGATG 5'& .||| .||| |||.|||. &5' -TCTGATGCC--CTCTTCTG- 3' Rnf168 mmu-miR-877 beg:51 end:67 pic:3' GGGACGCGGTAGAGGAGATG 5'& ||.| |||.|||. &5' ------GCTAGCTCTTCTG- 3' Rnf168 mmu-miR-877 beg:1025 end:1047 pic:3' GGGACG---CGGTAGAGGAGATG 5'& ||||| ||||||||. | &5' -CCTGCTGAGCCATCTCTAC--- 3' Rnf168 mmu-miR-878-5p beg:1712 end:1731 pic:3' ACAGAACTGTAGGTTGATCTAT 5'& ||| || ||.|||||| &5' ------GACTTCAAATTAGATA 3' Rnf168 mmu-miR-878-5p beg:1048 end:1062 pic:3' ACAGAACTGTAGGT--TGATCTAT 5'& ||| .|||||| &5' -----------CCACTGCTAGAT- 3' Rnf168 mmu-miR-883b-5p beg:1500 end:1518 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& |||.. |.|||||| &5' -----GCTGTAG--TTTCAGTA 3' Rnf168 mmu-miR-883b-5p beg:2060 end:2080 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& |.| .| ||||||| &5' -GGCAAGGGCA---TCTCAGT- 3' Rnf168 mmu-miR-98 beg:840 end:862 pic:3' TTGTTATGTTGAAT---GATGGAGT 5'& |||||. ||.||||| &5' ----ATACAGAGAAACCCTGCCTCA 3' Rnf168 mmu-miR-9star beg:1337 end:1360 pic:3' TGAAAGCCAATAGATCGAAATA 5'& .|| ||| ||.|||||| &5' GCTGTCGAACACCTGGCTTTA- 3' Rnf168 mmu-miR-1190 beg:489 end:504 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& ||| ||||||| &5' ---------GAAGGTCAGCTG- 3' Rnf168 mmu-miR-703 beg:479 end:498 pic:3' AAGAAAGGAAGACTTCCAAAA 5'& || .||||||||||| &5' --CTGCTCTTCTGAAGGT--- 3' Rnf168 mmu-miR-703 beg:498 end:517 pic:3' AAGAAAGGAAGACTTCCAAAA 5'& || .||||||||||| &5' --CTGCTCTTCTGAAGGT--- 3' Rnf168 mmu-miR-1949 beg:1263 end:1280 pic:3' TTGATACGACTGTAGGACCATATC 5'& |.|. .||||||| &5' ---------GGCGAATTGGTATA- 3' Rnf168 mcmv-miR-m01-2 beg:1179 end:1197 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& ||. | ||||||||. &5' -------CAGAAC-ATTCTCTTT 3' Rnf168 mcmv-miR-m01-2 beg:1508 end:1528 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& |||.||. |||||||||| &5' ---GTTTCAGTA-GATTCTCTTC 3' Rnf168 mmu-miR-350 beg:1742 end:1754 pic:3' CTTTCACATACCCGAAACACTT 5'& ||||||||| &5' -------------CTTTGTGAA 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf168 RAID00020910 mmu-miR-7223-5p miRNA MIMAT0028414 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00032532 mmu-miR-335-5p miRNA MIMAT0000766 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00045011 mmu-miR-382-5p miRNA MIMAT0000747 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00061197 mmu-miR-541-5p miRNA MIMAT0003170 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00080231 mmu-miR-1264-3p miRNA MIMAT0014803 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID00188422 mmu-miR-199a-5p miRNA MIMAT0000229 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID00216958 mmu-miR-15b-5p miRNA MIMAT0000124 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID00242585 mmu-miR-493-3p miRNA MIMAT0004888 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID00494529 mmu-miR-1192 miRNA MIMAT0005850 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID00502358 mmu-miR-139-5p miRNA MIMAT0000656 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00504280 mmu-miR-495-3p miRNA MIMAT0003456 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID00505195 mmu-miR-6369 miRNA MIMAT0025113 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00595629 mmu-miR-5119 miRNA MIMAT0020627 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID00624695 mmu-miR-503-5p miRNA MIMAT0003188 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID00632724 mmu-miR-147-5p miRNA MIMAT0017269 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00784347 mmu-miR-1249-5p miRNA MIMAT0014804 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00804453 mmu-let-7i-5p miRNA MIMAT0000122 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID00969812 mmu-miR-6973a-3p miRNA MIMAT0027849 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID00995912 mmu-miR-7660-3p miRNA MIMAT0029827 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01074025 mmu-miR-1258-5p miRNA MIMAT0029904 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01122760 mmu-miR-142a-3p miRNA MIMAT0000155 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01193388 mmu-miR-3084-3p miRNA MIMAT0014877 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01194999 mmu-miR-1907 miRNA MIMAT0007876 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID01327461 mmu-miR-3473c miRNA MIMAT0020614 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID01344623 mmu-miR-761 miRNA MIMAT0003893 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID01430456 mmu-miR-709 miRNA MIMAT0003499 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01611254 mmu-miR-30f miRNA MIMAT0025179 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01615726 mmu-let-7f-5p miRNA MIMAT0000525 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID01629440 mmu-miR-3094-3p miRNA MIMAT0014910 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01633323 mmu-let-7g-5p miRNA MIMAT0000121 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID01789228 mmu-miR-3101-3p miRNA MIMAT0014922 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01881437 mmu-miR-3065-5p miRNA MIMAT0014836 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID01930881 mmu-miR-494-3p miRNA MIMAT0003182 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02019857 mmu-miR-224-5p miRNA MIMAT0000671 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02039840 mmu-miR-342-3p miRNA MIMAT0000590 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02051902 mmu-miR-6359 miRNA MIMAT0025102 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02064245 mmu-miR-3078-3p miRNA MIMAT0014865 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02082676 mmu-miR-214-3p miRNA MIMAT0000661 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02186916 mmu-miR-204-5p miRNA MIMAT0000237 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02288544 mmu-miR-421-3p miRNA MIMAT0004869 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02302356 mmu-miR-8118 miRNA MIMAT0031424 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02325328 mmu-miR-5125 miRNA MIMAT0020635 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID02384321 mmu-miR-196a-5p miRNA MIMAT0000518 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID02452918 mmu-miR-374b-5p miRNA MIMAT0003727 Rnf168 mRNA 70238 Prediction 0.2202 Rnf168 RAID02502799 mmu-miR-5124b miRNA MIMAT0025136 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02519497 mmu-miR-7041-5p miRNA MIMAT0027986 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02534131 mmu-miR-3470b miRNA MIMAT0015641 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID02641777 mmu-miR-3110-5p miRNA MIMAT0014951 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID02653216 mmu-miR-6922-3p miRNA MIMAT0027745 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02729217 mmu-miR-141-3p miRNA MIMAT0000153 Rnf168 mRNA 70238 Prediction 0.2202 Rnf168 RAID02846275 mmu-miR-6410 miRNA MIMAT0025163 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02854351 mmu-miR-7116-3p miRNA MIMAT0028130 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02860504 mmu-miR-6413 miRNA MIMAT0025166 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID02867438 mmu-miR-16-5p miRNA MIMAT0000527 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID02874604 mmu-miR-196b-5p miRNA MIMAT0001081 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID02953079 mmu-miR-15a-5p miRNA MIMAT0000526 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID02955414 mmu-miR-6951-3p miRNA MIMAT0027803 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03021417 mmu-miR-6946-5p miRNA MIMAT0027792 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03072969 mmu-miR-877-5p miRNA MIMAT0004861 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03101183 mmu-miR-3064-3p miRNA MIMAT0014835 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03108918 mmu-miR-7035-3p miRNA MIMAT0027975 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03192829 mmu-miR-5619-3p miRNA MIMAT0022366 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03194724 mmu-miR-330-5p miRNA MIMAT0004642 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID03217109 mmu-miR-3087-3p miRNA MIMAT0014896 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID03253831 mmu-miR-717 miRNA MIMAT0003510 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID03298733 mmu-miR-195a-5p miRNA MIMAT0000225 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID03372669 mmu-miR-7035-5p miRNA MIMAT0027974 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03397851 mmu-miR-203-3p miRNA MIMAT0000236 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03489217 mmu-miR-7670-3p miRNA MIMAT0029847 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03489433 mmu-miR-7681-3p miRNA MIMAT0029883 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03492154 mmu-miR-3071-5p miRNA MIMAT0014850 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID03510658 mmu-miR-320-3p miRNA MIMAT0000666 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03563056 mmu-miR-211-5p miRNA MIMAT0000668 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03607588 mmu-miR-6957-5p miRNA MIMAT0027814 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03729708 mmu-miR-322-5p miRNA MIMAT0000548 Rnf168 mRNA 70238 CLIP-seq 0.5483 Rnf168 RAID03813965 mmu-miR-6987-3p miRNA MIMAT0027877 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03832767 mmu-miR-24-3p miRNA MIMAT0000219 Rnf168 mRNA 70238 Prediction 0.2202 Rnf168 RAID03833368 mmu-miR-497a-5p miRNA MIMAT0003453 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID03846349 mmu-miR-98-5p miRNA MIMAT0000545 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID03912356 mmu-miR-200a-3p miRNA MIMAT0000519 Rnf168 mRNA 70238 Prediction 0.2202 Rnf168 RAID03939691 mmu-miR-6390 miRNA MIMAT0025139 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03970488 mmu-miR-326-3p miRNA MIMAT0000559 Rnf168 mRNA 70238 CLIP-seq//Prediction 0.6308 Rnf168 RAID03996805 mmu-miR-7674-3p miRNA MIMAT0029857 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID03999656 mmu-miR-6361 miRNA MIMAT0025104 Rnf168 mRNA 70238 Prediction 0.1828 Rnf168 RAID04022921 mmu-miR-196b-3p miRNA MIMAT0017170 Rnf168 mRNA 70238 Prediction 0.1828