Tom1l1
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Tom1l1; SrcasmATTTA10-14341792-1796;2022-2026;2146-2150;2826-2830;3083-3087;3703-3707;3908-3912;3938-3942
DNA & RNA Element - miRTarBase
Target Gene (Entrez ID)miRTarBase IDmiRNASpecies (miRNA)Target GeneSpecies (Target Gene)ExperimentsSupport TypeReferences (PMID)
MIRT004093mmu-miR-124-3pMus musculusTom1l171943Mus musculusLuciferase reporter assay//Microarray//qRT-PCRFunctional MTI18042700
MIRT014283mmu-miR-181a-5pMus musculusTom1l171943Mus musculusSequencingFunctional MTI (Weak)19536157
MIRT010612mmu-miR-340-5pMus musculusTom1l171943Mus musculusSequencingFunctional MTI (Weak)19536157
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000129mmu-miR-30a*71943Tom1l1cgACGUUUGUAGGCUGACUUuc ||| :||:: |||||| agUGCCUUUAUUUAACUGAAuc321349370[mm9:11:90507255-90507276:-]0.62981360-11.65-0.1268
MIMAT0004526mmu-miR-101a*71943Tom1l1cguagucgugacacuAUUGACu |||||| augagugccuuuauuUAACUGa28346367[mm9:11:90507258-90507279:-]0.62981206-9.83-0.2043
MIMAT0004529mmu-miR-125b*71943Tom1l1uccaggguucuuggaCUGAACa |||||| uagaauugcuugaaaGACUUGu28418439[mm9:11:90507186-90507207:-]0.53261206-14.04-0.1807
MIMAT0004530mmu-miR-127*71943Tom1l1uaGUCUCGGGA-GAC--UCGAAGUc || |:|| ||| ||||||| acCAUUUCUCUGCUGGAAGCUUCAa22188112[mm9:11:90507513-90507537:-]0.56261507-16.14-0.6813
MIMAT0004530mmu-miR-127*71943Tom1l1uaGUCUCGGGAGACUC-GAAGUc || ||| :|||| ||||| gaCAAUGCC--UUGAGACUUCAg221152172[mm9:11:90507453-90507473:-]0.55641210-21.59-0.3360
MIMAT0004533mmu-miR-141*71943Tom1l1agguugugaCGUGACCUUCUac | | |||||| aacagauggGGAAAGGAAGAaa314324345[mm9:11:90507280-90507301:-]0.62981210-11.38-0.1458
MIMAT0004538mmu-miR-10b*71943Tom1l1auAAGGGGAU--CUUAGCUUAGAc | ||::|| || :|||||| agUGCCUUUAUUUAACUGAAUCUg221349372[mm9:11:90507253-90507276:-]0.62981396-17.33-0.1326
MIMAT0004539mmu-miR-183*71943Tom1l1aauACCGGGAA-GCCAUUAAGUg || |::|| : ||||||| ucuUGCCUUUUAUUAUAAUUCAc220520542[mm9:11:90507083-90507105:-]0.53261507-15.26-1.1518
MIMAT0004539mmu-miR-183*71943Tom1l1aauaccgggaagccaUUAAGUg |||||| ugaaucugaauguacAAUUCAg28365386[mm9:11:90507239-90507260:-]0.62981206-7.84-0.1243
MIMAT0004541mmu-miR-188-3p71943Tom1l1acgUUUGGGACGUACAC-CCUc |||:|:||: |||| ||| ggaAAAUCUUGU-UGUGAGGAa219172192[mm9:11:90507433-90507453:-]0.55641280-18.05-1.0809
MIMAT0000249mmu-miR-30e*71943Tom1l1cgacauuuGUAGGCUGACUUuc :||:: |||||| agugccuuUAUUUAACUGAAuc315349370[mm9:11:90507255-90507276:-]0.62981300-9.96-0.1268
MIMAT0000375mmu-miR-297a71943Tom1l1ugUACGU-GUACGUGUGUAUGUa ||||| ||| :||||| | caAUGCAUCAU--UUACAUAAAa221579599[mm9:11:90507026-90507046:-]0.53261240-12.88-0.1451
MIMAT0004579mmu-miR-302a*71943Tom1l1cguUCAUGUU--GGUGCAAAUUca ||| | | : |:|||||| guuAGUCCUAUGUAAUGUUUAAca320495518[mm9:11:90507107-90507130:-]0.53261300-6.35-0.1792
MIMAT0004622mmu-let-7c-1*71943Tom1l1ccuuucgaucuUCCAACAUGuc || |||||| auguacaauucAGUUUGUACuu312374395[mm9:11:90507230-90507251:-]0.62981270-6.16-0.1037
MIMAT0004622mmu-let-7c-1*71943Tom1l1ccuuucgaucuuccaACAUGUc |||||| uuaacugaaucugaaUGUACAa28360381[mm9:11:90507244-90507265:-]0.62981206-7.12-0.1566
MIMAT0004628mmu-miR-21*71943Tom1l1cuGUCGGGUAGCUGACGACAAc | | ||| | ||||||||| ucCUGGCCAAC-ACUGCUGUUc221129149[mm9:11:90507476-90507496:-]0.55641627-18.65-0.1686
MIMAT0004636mmu-miR-93*71943Tom1l1gcCCUUCACGAUCGAGUCGUCa |||| | || | ||||||| aaGGAA-UACUUGAUCAGCAGa2212545[mm9:11:90507580-90507600:-]0.55251627-17.29-0.7711
MIMAT0000551mmu-miR-323-3p71943Tom1l1ucUCCAGCUGG-CACAUUACAc || | | || |||||||| guAGUUAGUCCUAUGUAAUGUu220492513[mm9:11:90507112-90507133:-]0.53261547-11.40-1.0608
MIMAT0000558mmu-miR-325*71943Tom1l1ugugaaugacUCGU-GGAUGAUcc | || ||||||| uuuaagaucaAUCAUCCUACUAua314290313[mm9:11:90507312-90507335:-]0.59311280-9.77-0.1994
MIMAT0004647mmu-miR-338-5p71943Tom1l1guGAGUCGUGGUCCUAUAACAa | :| :| :| ||||||| auCCUACUA-UAAAAUAUUGUa221303323[mm9:11:90507302-90507322:-]0.59311427-7.52-1.2735
MIMAT0004666mmu-miR-33*71943Tom1l1cacuacgugacaccuUUGUAAc |||||| uacuuguuuauaaauAACAUUu28391412[mm9:11:90507213-90507234:-]0.58121206-3.84-0.1017
MIMAT0004670mmu-miR-7a*71943Tom1l1auaccgucUGA-CACUAAACAac ||| | |||||| auuaaauuACUAUUAAUUUGUc-315599620[mm9:11:90507005-90507026:-]0.50561250-3.59-0.2924
MIMAT0004691mmu-miR-382*71943Tom1l1uuuuucacaacaggcACUUACu |||||| uuauuuaacugaaucUGAAUGu28356377[mm9:11:90507248-90507269:-]0.62981206-7.89-0.1030
MIMAT0001093mmu-miR-411*71943Tom1l1ccaaucaccuggcacAAUGUAu |||||| uggacaaugcaucauUUACAUa28575596[mm9:11:90507029-90507050:-]0.53261206-12.85-0.2752
MIMAT0003186mmu-miR-369-3p71943Tom1l1uuucuaguUGGUACAUAAUAa :|| | |||||| acauucuuGCCUUUUAUUAUa214516536[mm9:11:90507089-90507109:-]0.53261216-4.19-0.1655
MIMAT0004790mmu-miR-503*71943Tom1l1gguccgUCACCUUUGUUA-UGAg | | |||||||| ||| auucugAUUUGAAACAAUGACUc217543565[mm9:11:90507060-90507082:-]0.53261280-12.85-0.9572
MIMAT0003461mmu-miR-68371943Tom1l1cuCCUGUGUCGAAU-GUCGUCc ||| |:| :| | |||||| aaGGA-AUACUUGAUCAGCAGa2202545[mm9:11:90507580-90507600:-]0.55251216-16.83-0.4514
MIMAT0003462mmu-miR-68471943Tom1l1aacugAACUUCCCUUUUGa ||| : ||||||| ucuugUUGUGAGGAAAACu215178196[mm9:11:90507429-90507447:-]0.55641507-14.35-0.5453
MIMAT0003462mmu-miR-68471943Tom1l1aacugaacuucCCUUUUGa ||||||| caaugacucuuGGAAAACu29557575[mm9:11:90507050-90507068:-]0.53261407-14.89-0.8361
MIMAT0003470mmu-miR-69171943Tom1l1aaaagACGGAG---AGAAGUCCUUa |||||: ||||||||| gacaaUGCCUUGAGACUUCAGGAAa218152176[mm9:11:90507449-90507473:-]0.55641567-22.11-0.8710
MIMAT0003500mmu-miR-71071943Tom1l1gagUUGAGAGGGGUUCUGAACc ||:| :: |||||||| uagAAUUGCUUGAAAGACUUGu220418439[mm9:11:90507186-90507207:-]0.53261517-12.86-1.2046
MIMAT0004839mmu-miR-743b-5p71943Tom1l1acuaccugUGG-UCAGACUUGu ||: | ||||||: uuuauuuaACUGAAUCUGAAUg214355376[mm9:11:90507249-90507270:-]0.62981280-7.90-0.1154
MIMAT0004841mmu-miR-87171943Tom1l1guacugaccgUGA-UUAGACUUAu ||| ||||||||| ccuuuauuuaACUGAAUCUGAAUg214353376[mm9:11:90507249-90507272:-]0.62981567-14.11-1.0630
MIMAT0005292mmu-miR-582-3p71943Tom1l1aacccaagucaacAAGUUGUCc |||||||| cucugcuggaagcUUCAACAGa21095116[mm9:11:90507509-90507530:-]0.56261457-11.75-0.7954
MIMAT0005832mmu-miR-669g71943Tom1l1uaGUACAGUUGUGUAUGUUACGu | || || :: ||||||| cuCUUGGAAAACUGGACAAUGCa222563585[mm9:11:90507040-90507062:-]0.53261497-14.53-0.9794
MIMAT0005832mmu-miR-669g71943Tom1l1uaGU-ACAGUUGUGUAUGUUACGu || || :: : | ||||||| aaCACUGCUGUUCCUGACAAUGCc222137160[mm9:11:90507465-90507488:-]0.55641447-10.22-0.2990
MIMAT0009400mmu-miR-193671943Tom1l1cggucaagugucguccAGUCAAu |||||| aaucugaauguacaauUCAGUUu28367389[mm9:11:90507236-90507258:-]0.62981206-8.59-0.1040
MIMAT0009406mmu-miR-1941-3p71943Tom1l1uacccUCUAUGACGAUUCUAc ||:|: ||||||| gcaucAGGUG-GCCUAAGAUg217473492[mm9:11:90507133-90507152:-]0.53261427-14.71-0.1501
MIMAT0009422mmu-miR-195171943Tom1l1aucggUGUGGUCAG-AGG-UGAUg | |:|| || ||| |||| cuuuaAGAUCAAUCAUCCUACUAu218289312[mm9:11:90507313-90507336:-]0.59311200-14.00-1.2125
MIMAT0009427mmu-miR-669n71943Tom1l1uguguguaggUGUGUGUUUa |:||||||| ---------gAUACACAAAg211111[mm9:11:90507614-90507623,90508149-90508149:-]0.58971467-9.24-0.1911
MIMAT0009427mmu-miR-669n71943Tom1l1ugUGUGUAG-GUGUGUGUUUa |::|||| : :|||:||| caAUGCAUCAUUUACAUAAAa219579599[mm9:11:90507026-90507046:-]0.53261410-12.89-0.1093
MIMAT0009428mmu-miR-195671943Tom1l1aggcgacugagucggGACCUGa |||||| augacucuuggaaaaCUGGACa28559580[mm9:11:90507045-90507066:-]0.53261206-18.67-0.2157
MIMAT0009435mmu-miR-196271943Tom1l1uacacagggUCACGGUCG-GAGa || |||||| ||| gauacacaaAGGGCCAGCUCUCu214123[mm9:11:90507602-90507623,90508149-90508149:-]0.58971210-21.31-0.7642
MIMAT0009446mmu-miR-197171943Tom1l1agagucggguCGGAAAUg ||||||| gaaaaugaguGCCUUUAu29342359[mm9:11:90507266-90507283:-]0.62981407-9.43-1.1085
MIMAT0009446mmu-miR-197171943Tom1l1agaGUCGGGUCGGAAAug || :|: |||||| uaaCAUUCUUGCCUUUua316514531[mm9:11:90507094-90507111:-]0.53261310-11.40-0.2842
MIMAT0009458mmu-miR-198171943Tom1l1cggugcagauucggguCGGAAAUg ||||||| aaggaagaaaaugaguGCCUUUAu29336359[mm9:11:90507266-90507289:-]0.62981407-11.40-1.1085
MIMAT0009458mmu-miR-198171943Tom1l1cggUGCAGAU--UCGGGUCGGAAAug |:||:|| | :|: |||||| guaAUGUUUAACAUUCUUGCCUUUua322506531[mm9:11:90507094-90507119:-]0.53261400-16.04-0.2867
MIMAT0000128mmu-miR-30a71943Tom1l1gaAGGUC-AGCUCCUACAAAUGu |:||| |:| ||||||: aaUUCAGUUUGUACUUGUUUAUa221380402[mm9:11:90507223-90507245:-]0.62981350-14.98-0.2383
MIMAT0000130mmu-miR-30b71943Tom1l1ucGACUCACAUCCUACAAAUGu | | |||| ||||||: uuCAGUUUGUA-CUUGUUUAUa221382402[mm9:11:90507223-90507243:-]0.62981300-10.57-0.2340
MIMAT0000134mmu-miR-12471943Tom1l1ccguaagUGGCGCACGGAAu | :| ||||||| ggaagaaAAUGAGUGCCUUu214338357[mm9:11:90507268-90507287:-]0.62981457-14.74-1.1727
MIMAT0000134mmu-miR-12471943Tom1l1ccguaaguggcgcACGGAAu |||||| uguuuaacauucuUGCCUUu28510529[mm9:11:90507096-90507115:-]0.53261206-11.93-0.1495
MIMAT0000157mmu-miR-14571943Tom1l1uccCUAAGGACCCUUUUGACCUg || ||:| ||||||||||| aauGACUCUU-GGAAAACUGGAc221558579[mm9:11:90507046-90507067:-]0.53261747-25.67-0.9770
MIMAT0000210mmu-miR-181a71943Tom1l1ugAGUGGCUGUCGCAACUUACAa | ||:|| | | ||||||| uuUAACUGA-AUC--UGAAUGUa222359378[mm9:11:90507247-90507266:-]0.62981487-11.60-1.0831
MIMAT0000248mmu-miR-30e71943Tom1l1gaAGGUCAGUUCCU--ACAAAUGu |:||||: | | ||||||: aaUUCAGUU-UGUACUUGUUUAUa221380402[mm9:11:90507223-90507245:-]0.62981330-14.39-0.2383
MIMAT0000514mmu-miR-30c71943Tom1l1cgACUCUCACAUCCUACAAAUGu | || |||| ||||||: auUCAGUUUGUA-CUUGUUUAUa222381402[mm9:11:90507223-90507244:-]0.62981350-11.19-0.2340
MIMAT0000515mmu-miR-30d71943Tom1l1gaAGGUC-AGCCCCUACAAAUGu |:||| |:| ||||||: aaUUCAGUUUGUACUUGUUUAUa221380402[mm9:11:90507223-90507245:-]0.62981350-14.26-0.2361
MIMAT0000533mmu-miR-26a71943Tom1l1ucGGAUAGGACCUAAUGAACUu :|| | ||| ||||||| gcUCUCUAAAGGAAUACUUGAu2211738[mm9:11:90507587-90507608:-]0.53621567-14.34-0.3610
MIMAT0000533mmu-miR-26a71943Tom1l1ucgGAUAGGACCUA-AUGAACuu | ||:| | | |||||| guaCAAUUCAGUUUGUACUUGuu320376398[mm9:11:90507227-90507249:-]0.62981300-8.16-0.1411
MIMAT0000534mmu-miR-26b71943Tom1l1ugGAUAGGACUUAAUGAACUu || | |:| ||||||| cuCUCUAAAGGAAUACUUGAu2201838[mm9:11:90507587-90507607:-]0.53621517-11.49-0.3610
MIMAT0000534mmu-miR-26b71943Tom1l1ugGAUAGGACUUA-AUGAACuu | ||:| | | |||||| uaCAAUUCAGUUUGUACUUGuu320377398[mm9:11:90507227-90507248:-]0.62981300-8.55-0.1411
MIMAT0000538mmu-miR-3171943Tom1l1guCGAUAC-GGUCGU-AGAACGGa |: ||| ::| || ||||||| auGUAAUGUUUAACAUUCUUGCCu221504527[mm9:11:90507098-90507121:-]0.53261547-16.63-1.2498
MIMAT0000565mmu-miR-32871943Tom1l1ugccuucccGUCUCUCCCGGUc || | ||||||| -----gauaCACAAAGGGCCAg214117[mm9:11:90507608-90507623,90508149-90508149:-]0.58971497-18.27-0.6001
MIMAT0004651mmu-miR-340-5p71943Tom1l1uuAGUCAGA-GUAACGAAAUAUu |||||:| :| | |||||| auUCAGUUUGUACUUGUUUAUAa221381403[mm9:11:90507222-90507244:-]0.62981356-11.98-0.3354
MIMAT0000667mmu-miR-3371943Tom1l1acguuacgUUGA--UGUUACGUg |||| |||||||| ucuuggaaAACUGGACAAUGCAu214564586[mm9:11:90507039-90507061:-]0.53261527-13.13-0.9809
MIMAT0000668mmu-miR-21171943Tom1l1uccGUUUCCUACUGUU-UCCCUu |||: || ||| ||||| agaCAAGACCUGCCAACAGGGAg2205476[mm9:11:90507549-90507571:-]0.56871230-14.94-0.1213
MIMAT0000673mmu-miR-181b71943Tom1l1ugggUGGCUGUCGUUACUUACAa ||:|| | | ||||||| uuuaACUGA-AUC--UGAAUGUa220359378[mm9:11:90507247-90507266:-]0.62981467-11.54-1.0831
MIMAT0000674mmu-miR-181c71943Tom1l1ugAGUGGCUGUCCAACUUACAa | ||:|| | ||||||| uuUAACUGA-A-UCUGAAUGUa221359378[mm9:11:90507247-90507266:-]0.62981447-12.18-1.1016
MIMAT0000746mmu-miR-38171943Tom1l1ugucucUCGAACGGGAACAUAu ||:|||: ||||| | caauucAGUUUGUACUUGUUUa217379400[mm9:11:90507225-90507246:-]0.62981320-12.78-0.1135
MIMAT0004745mmu-miR-384-5p71943Tom1l1ugUAA--CGGAUCCUUAACAAAUGu ||| |::| | | |||||||: caAUUCAGUUU-GUACUUGUUUAUa222379402[mm9:11:90507223-90507246:-]0.62981380-10.19-0.2404
MIMAT0001092mmu-miR-376b71943Tom1l1uucaccuacaaggAGAUACUa ||||||| aaaucaugacagaUCUAUGAu29262282[mm9:11:90507343-90507363:-]0.55641407-10.17-0.4090
MIMAT0001420mmu-miR-43371943Tom1l1ugUGGCUCCUCGGGUAGUACUa |:| || | | ||||||| cuAUC-AGUA-CAAAUCAUGAc221252271[mm9:11:90507354-90507373:-]0.55641447-12.01-0.7539
MIMAT0003128mmu-miR-48571943Tom1l1cuUAAGU-AGUGCCGGUCG-GAGa || || | ||||||| ||| -gAUACACAAAGGGCCAGCUCUCu221123[mm9:11:90507602-90507623,90508149-90508149:-]0.58971230-22.58-0.7716
MIMAT0003168mmu-miR-54371943Tom1l1uucUUCACGUGGCGCUUACAaa || || |:| :|||||| uuuAACUGAAUC-UGAAUGUac320359379[mm9:11:90507246-90507266:-]0.62981370-9.32-0.1410
MIMAT0003183mmu-miR-376c71943Tom1l1ugcACUUUAAAGGAGAUACAa || |:|| : |||||| agaUGUAGUUAGUCCUAUGUa219488508[mm9:11:90507117-90507137:-]0.53261266-10.61-0.1055
MIMAT0003727mmu-miR-37471943Tom1l1guGAAUCGUCCAACAUAAUAUa |||: | || ||||||| uuCUUGCC---UUUUAUUAUAa221519537[mm9:11:90507088-90507106:-]0.53261487-4.63-1.2433
MIMAT0003456mmu-miR-49571943Tom1l1uuCUUCACGUGGUA---CAAACAaa ||| ||:|| || |||||| cuGAA-UGUACAAUUCAGUUUGUac321370393[mm9:11:90507232-90507255:-]0.62981370-10.31-0.1462
MIMAT0004324mmu-miR-181d71943Tom1l1ugggUGGCUGUUGUUACUUACAa ||:|| | | ||||||| uuuaACUGA-AUC--UGAAUGUa220359378[mm9:11:90507247-90507266:-]0.62981467-11.54-1.0855
MIMAT0004896mmu-miR-590-3p71943Tom1l1ugaUCGAAUAUGUAUUUUAAu | | | ||||||||||| ugcAUCAUUUACAUAAAAUUa219582602[mm9:11:90507023-90507043:-]0.53261667-10.44-1.2589
MIMAT0004936mmu-miR-87371943Tom1l1uccUCUGAGUGUUCAAGGACg | ||| :| ||||||| ccaACACU-GC-UGUUCCUGa219135153[mm9:11:90507472-90507490:-]0.55641427-15.72-0.8340
MIMAT0004943mmu-miR-65371943Tom1l1gucaucucuaaCAAAGUUGUg | ||||||| cucugcuggaaGCUUCAACAg21195115[mm9:11:90507510-90507530:-]0.56261427-7.56-0.2506
MIMAT0005850mmu-miR-119271943Tom1l1uuaaACCAGACAA-ACAAACAaa || | || |||||| ugaaUGUACAAUUCAGUUUGUac319371393[mm9:11:90507232-90507254:-]0.62981210-5.64-0.1520
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G043801Tom1l1Mus musculus71943
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Tom1l1mmu-miR-710beg:422end:439pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& .||. |||||||| &5' ----GCTTGA---AAGACTTG- 3'
Tom1l1mmu-miR-328beg:7end:18pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& |||||||| &5' --------------AGGGCCAG 3'
Tom1l1mmu-miR-33beg:569end:587pic:3' ACGTTACGTTGA--TGTTACGTG 5'& |||| ||||||||. &5' --------AACTGGACAATGCAT 3'
Tom1l1mghv-miR-M1-1beg:83end:96pic:3' TTTCCTTCATGCC-GGTAAAGAT 5'& || |||||||| &5' -----------GGACCATTTCT- 3'
Tom1l1mmu-miR-1941-3pbeg:475end:493pic:3' TACCCTCTATGACGATTCTAC 5'& ||.|. |||||||| &5' -----AGGTGGC-CTAAGATG 3'
Tom1l1mmu-miR-1971beg:344end:360pic:3' AGAGTCGGGTCGGAAATG 5'& | ||. |||||||. &5' --TGAGT---GCCTTTAT 3'
Tom1l1mmu-miR-1981beg:344end:360pic:3' CGGTGCAGATTCGGGTCGGAAATG 5'& |.||. |||||||. &5' --------TGAGT---GCCTTTAT 3'
Tom1l1mmu-miR-684beg:557end:576pic:3' AACTGAACTTCCCTTTTGA 5'& ||||| |||||||| &5' -TGACTCTT--GGAAAACT 3'
Tom1l1mmu-miR-323-3pbeg:496end:513pic:3' TCTCCAGCTGGCACATTACAC 5'& ||| | |||||||| &5' ----GTC--CTATGTAATGT- 3'
Tom1l1mmu-miR-873beg:136end:153pic:3' TCCTCTGAGTGTT--CAAGGACG 5'& ||| ||||||| &5' --------CACTGCTGTTCCTG- 3'
Tom1l1mcmv-miR-m22-1beg:322end:336pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& || ||.|||||| &5' ----------ACAGATGGGGAA 3'
Tom1l1mcmv-miR-m59-1beg:128end:147pic:3' GACTGCCAGCTCCGTGACGATT 5'& |||.| |||||||. &5' CTGGCCAA-----CACTGCTG- 3'
Tom1l1mcmv-miR-M87-1beg:138end:162pic:3' CGACGGCGACGGCTGCCGACGGA 5'& ||||.|.| |.||| ||||| &5' -CTGCTGTTCCTGACAA-TGCCT 3'
Tom1l1mghv-miR-M1-8beg:344end:354pic:3' CTGGTTTGGGGGTCACTCACGA 5'& ||||||| &5' --------------TGAGTGC- 3'
Tom1l1mmu-let-7gbeg:209end:233pic:3' TTGACATGTTTGATGATGGAGT 5'& ||||| .|||||.. ||| &5' AACTGGTTAAACTGTGGACTC- 3'
Tom1l1mmu-miR-101astarbeg:343end:368pic:3' CGTAGTCGTGACACT--ATTGACT 5'& || || | ||||||| &5' --ATGAGTGCCTTTATTTAACTGA 3'
Tom1l1mmu-miR-1193beg:476end:488pic:3' CTATCATTTTGCCCACTGGAT 5'& ||||.|||| &5' ------------GGTGGCCTA 3'
Tom1l1mmu-miR-1beg:500end:523pic:3' TATGTATGAAGAAATGTAAGGT 5'& ||..|| .|| ||||||. &5' -TATGTAATGTTTAACATTCT- 3'
Tom1l1mmu-miR-124beg:335end:357pic:3' CCGTAAGTGGCGCACGGAAT 5'& || .| ||||||| &5' GGAAGAAAATGAGTGCCTT- 3'
Tom1l1mmu-miR-130abeg:347end:373pic:3' TACGGGA--AAATTGTAACGT-GAC 5'& .||||.| |||||| || ||| &5' GTGCCTTTATTTAAC--TGAATCTG 3'
Tom1l1mmu-miR-130bbeg:372end:395pic:3' TACGGGA-AAGTAGTAACGTGAC 5'& |||. |||| |||.||| &5' ATGTACAATTCAGT-TTGTACT- 3'
Tom1l1mmu-miR-136beg:268end:288pic:3' GGTAGTAGTTTTGT--TTACCTCA 5'& ||.| | .||||.|| &5' -------CAGATCTATGATGGGGT 3'
Tom1l1mmu-miR-136beg:314end:335pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& .|| | |||||.||||.| &5' -TATTGT--AAACAGATGGGG- 3'
Tom1l1mmu-miR-145beg:558end:580pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || ||.| |||||||||||| &5' ---GACTCTT-GGAAAACTGGAC 3'
Tom1l1mmu-miR-145beg:88end:105pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& |||.|| .||||| &5' ----ATTTCTCT----GCTGGA- 3'
Tom1l1mmu-miR-154beg:470end:488pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||| || || |..|||| &5' -----GCATCA-GG-TGGCCTA 3'
Tom1l1mmu-miR-15abeg:128end:149pic:3' GTGTTTGGTAATACACGACGAT 5'& | .||| |||||.| &5' --CTGGCCAACAC-TGCTGTT- 3'
Tom1l1mmu-miR-15astarbeg:470end:487pic:3' ACTCCGTCGT-GTCATACCGGAC 5'& ||| ||| .|||||| &5' -------GCATCAG-GTGGCCT- 3'
Tom1l1mmu-miR-15bbeg:130end:149pic:3' ACATTTGGTACTACACGACGAT 5'& ..||| |||||.| &5' ----GGCCAACAC-TGCTGTT- 3'
Tom1l1mmu-miR-16beg:131end:149pic:3' GCGGTTATAAATGCACGACGAT 5'& ||||| || |||||.| &5' -GCCAAC----AC-TGCTGTT- 3'
Tom1l1mmu-miR-181abeg:360end:378pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& ||.|| ||||||| &5' ----ACTGAATC---TGAATGT- 3'
Tom1l1mmu-miR-181bbeg:360end:378pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& ||.|| ||||||| &5' ----ACTGAATC---TGAATGT- 3'
Tom1l1mmu-miR-181cbeg:360end:378pic:3' TGAGTGGCTGTCCAACTTACAA 5'& ||.|| ||||||| &5' ----ACTGAATC--TGAATGT- 3'
Tom1l1mmu-miR-181dbeg:360end:378pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& ||.|| ||||||| &5' ----ACTGAATC---TGAATGT- 3'
Tom1l1mmu-miR-1898beg:25end:40pic:3' CTAGGGGACACTTG-GAACTGGA 5'& |||. |||||.| &5' ----------GAATACTTGATC- 3'
Tom1l1mmu-miR-1907beg:125end:150pic:3' TGGAGGTCTAGGA---GACGACGAG 5'& ||.||| |. || ||||||.|| &5' ACTTCCTGG-CCAACACTGCTGTTC 3'
Tom1l1mmu-miR-1928beg:475end:498pic:3' CTCGACCG----TTACATCGA 5'& || |||| .||||||.| &5' -AGGTGGCCTAAGATGTAGTT 3'
Tom1l1mmu-miR-1941-3pbeg:278end:298pic:3' TACCCTCTATGACGATTCTAC 5'& ||||| .|||| .|||||| &5' ATGGG--GTACT-TTAAGAT- 3'
Tom1l1mmu-miR-1948beg:184end:203pic:3' GACATGCTCACGA-GACGGATTT 5'& ||| |||||||.| &5' ------GAGGAAAACTGCCTAGA 3'
Tom1l1mmu-miR-1950beg:477end:496pic:3' ACTGGTATAGGAATCTACGTCT 5'& .|. ||| |||||.|| &5' -----GTGGCCTAAGATGTAG- 3'
Tom1l1mmu-miR-1952beg:323end:344pic:3' GTCTTCCTCCCACC-TCT 5'& |||| ||.| || ||| &5' CAGATGGGGAAAGGAAGA 3'
Tom1l1mmu-miR-196abeg:182end:202pic:3' GGGTTGTTGTACT----TTGATGGAT 5'& .||| ||||.|||| &5' ---------GTGAGGAAAACTGCCTA 3'
Tom1l1mmu-miR-196bbeg:185end:202pic:3' GGGTTGTTGTCC-TTTGATGGAT 5'& ||| |||||.|||| &5' ---------AGGAAAACTGCCTA 3'
Tom1l1mmu-miR-199a-3pbeg:129end:148pic:3' ATTGGTTACACGTCTGATGACA 5'& |..|||| |||.|||| &5' TGGCCAAC------ACTGCTGT 3'
Tom1l1mmu-miR-199bbeg:129end:148pic:3' ATTGGTTACACGTCTGATGACA 5'& |..|||| |||.|||| &5' TGGCCAAC------ACTGCTGT 3'
Tom1l1mmu-miR-2134beg:470end:492pic:3' CGTGGGGCAAAGGGTTCTG 5'& |||.| || ||.||||. &5' GCATCAGGTGGCCTAAGAT 3'
Tom1l1mmu-miR-2135beg:155end:171pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |||. ||||.|| &5' ------GCCTTGAGACTTC- 3'
Tom1l1mmu-miR-2141beg:121end:133pic:3' TTGAAAAGACTGTGGAGGA 5'& ||||.|||| &5' ----------ACACTTCCT 3'
Tom1l1mmu-miR-21starbeg:130end:149pic:3' CTGTCGGGTAGCTGACGACAAC 5'& .||| | ||||||||| &5' ---GGCCAA-C-ACTGCTGTT- 3'
Tom1l1mmu-miR-222beg:476end:498pic:3' TGGGTCATCGG--TCTACATCGA 5'& .||.||| ||||||||.| &5' ----GGTGGCCTAAGATGTAGTT 3'
Tom1l1mmu-miR-26abeg:24end:38pic:3' TCGGATAGGACCTAATGAACTT 5'& ||| ||||||| &5' ----------GGAATACTTGA- 3'
Tom1l1mmu-miR-26abeg:411end:432pic:3' TCGGATAGGACCTAATGAACTT 5'& .|..|| |||.|||||| &5' GGTTTAGA----ATTGCTTGAA 3'
Tom1l1mmu-miR-26bbeg:18end:38pic:3' TGGATAGGACTTAATGAACTT 5'& .||| ||| ||||||| &5' -TCTAAAG-GAA-TACTTGA- 3'
Tom1l1mmu-miR-26bbeg:412end:432pic:3' TGGATAGGACTTAATGAACTT 5'& .|. |||||.|||||| &5' ----GTTTAGAATTGCTTGAA 3'
Tom1l1mmu-miR-290-3pbeg:280end:293pic:3' CCCGAATTTTGATCCGCCGTGAAA 5'& || ||.||||| &5' -------------GG-GGTACTTT 3'
Tom1l1mmu-miR-292-3pbeg:272end:293pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& || ||| ||.||||| &5' ----TCTATGA-TGG-GGTACTTT 3'
Tom1l1mmu-miR-299beg:222end:237pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& |.|| | ||..|||| &5' --GTGGA----C-TCTTACAT- 3'
Tom1l1mmu-miR-30ebeg:381end:403pic:3' GAAGGTCAGTTCCT-ACAAATGT 5'& |.||||. ||||||.| &5' --TTCAGTTTGTACTTGTTTATA 3'
Tom1l1mmu-miR-31beg:506end:528pic:3' GTCGATACGGTC-GT-AGAACGGA 5'& |||.. || |||||||| &5' -----ATGTTTAACATTCTTGCCT 3'
Tom1l1mmu-miR-338-3pbeg:84end:105pic:3' GTTGTTTTAGTGACTACGACCT 5'& .|| | || | ||||||| &5' -GACCATTTCTC---TGCTGGA 3'
Tom1l1mmu-miR-33starbeg:233end:252pic:3' CACTACGTGACACCTTTGTAAC 5'& ||.|||| |..||||| &5' ------CATTGTGCAGGCATTG 3'
Tom1l1mmu-miR-343beg:62end:78pic:3' AGACCCGTGTACTTCCCTCT 5'& || || ||||||| &5' -----GC-CAAC-AGGGAGA 3'
Tom1l1mmu-miR-3473beg:8end:25pic:3' CCGACTCGGTAGAGAGGT 5'& |.|||| |||||.| &5' ----GGGCCAGCTCTCTA 3'
Tom1l1mmu-miR-34cbeg:128end:146pic:3' CGTTAGTCGATTGA-TGTGACGGA 5'& ||..| |||||||. &5' --------CTGGCCAACACTGCT- 3'
Tom1l1mmu-miR-383beg:536end:553pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& |||| |||||||.| &5' --------TCACATTCTGATTT 3'
Tom1l1mmu-miR-432beg:154end:175pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||||. ||| |||.||.|| &5' -TGCCT--TGAG--ACTTCAGGA 3'
Tom1l1mmu-miR-449abeg:123end:146pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||. ||..| |||||||. &5' ACTTCCTGGCCA-ACACTGCT- 3'
Tom1l1mmu-miR-449bbeg:128end:146pic:3' CGGTCGATTGTTGTGACGGA 5'& | || |||||||||. &5' -CTGGC---CAACACTGCT- 3'
Tom1l1mmu-miR-449cbeg:128end:146pic:3' GGTCGATCGTTACGTGACGGA 5'& ||.|| ||||||. &5' ----CTGGCCAA-CACTGCT- 3'
Tom1l1mmu-miR-488beg:521end:532pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& ||||||.| &5' ------------GCCTTTTA- 3'
Tom1l1mmu-miR-539beg:75end:99pic:3' TGTGTGGTT-CCTATTAAAGAGG 5'& .| |||. ||| |||||||. &5' --GCCCCAGTGGACCATTTCTCT 3'
Tom1l1mmu-miR-582-3pbeg:98end:116pic:3' AACCCAAGTCAACAAGTTGTCC 5'& ||| || |||||||| &5' -TGGA---AGC--TTCAACAG- 3'
Tom1l1mmu-miR-592beg:576end:598pic:3' TGTAGTAGCGTA-TAACTGTGTTA 5'& || .|||| ||| |||.|| &5' ----CAATGCATCATTTACATAA- 3'
Tom1l1mmu-miR-654-3pbeg:239end:250pic:3' TTCCACTACCAGTCGTCTGTAT 5'& ||||.||| &5' -------------GCAGGCAT- 3'
Tom1l1mmu-miR-669ebeg:41end:63pic:3' TACT-TGTACGTGTGTGTTCTGT 5'& || .| || ||| ||||||| &5' --GAGGCCTG-ACAGACAAGAC- 3'
Tom1l1mmu-miR-669gbeg:564end:586pic:3' TAGTACAG-TTGTGTATGTTACGT 5'& || ||| |||||||| &5' ----TGGAAAACTGG-ACAATGCA 3'
Tom1l1mmu-miR-684beg:176end:197pic:3' AACTGAACTT--C-CCTTTTGA 5'& |||| | |||||||| &5' ----CTTGTTGTGAGGAAAACT 3'
Tom1l1mmu-miR-691beg:154end:176pic:3' AAAAGACGGAGA---GAAGTCCTTA 5'& |||||. ||||||||| &5' -----TGCCTTGAGACTTCAGGAA- 3'
Tom1l1mmu-miR-741beg:80end:98pic:3' AGATGTATCTTACC--GTAGAGAGT 5'& |.||| |||.|||| &5' ---------AGTGGACCATTTCTC- 3'
Tom1l1mmu-miR-743b-5pbeg:564end:581pic:3' ACTACCTGTGGTCAGACTTGT 5'& |||| |||.||| &5' ---TGGAAAA----CTGGACA 3'
Tom1l1mmu-miR-871beg:360end:376pic:3' GTACTGACCGTGAT-TAGACTTAT 5'& |||. ||||||||. &5' ----------ACTGAATCTGAATG 3'
Tom1l1mmu-miR-876-3pbeg:456end:473pic:3' ACTTAATGAAACATTTGGTGAT 5'& || |||..|||||. &5' -------CTGAGTAGGCCACTG 3'
Tom1l1mmu-miR-880beg:268end:289pic:3' AGATGAGTCTCTC--CTACCTCAT 5'& |||| |||||.||| &5' ------CAGATCTATGATGGGGTA 3'
Tom1l1mmu-miR-93starbeg:24end:45pic:3' GCCCTTCACGATCGAGTCGTCA 5'& |||| || ||||||| &5' --GGAATA-CTTGATCAGCAG- 3'
Tom1l1mmu-miR-590-3pbeg:588end:603pic:3' TGATCGAATATGTATTTTAAT 5'& |||||||||||| &5' ---------TACATAAAATTA 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Tom1l1RAID00052779mmu-miR-665-3pmiRNAMIMAT0003733Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00201267mmu-miR-26b-5pmiRNAMIMAT0000534Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00315855mmu-miR-384-5pmiRNAMIMAT0004745Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00372763mmu-miR-376c-3pmiRNAMIMAT0003183Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00516783mmu-miR-433-3pmiRNAMIMAT0001420Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00543363mmu-miR-145a-5pmiRNAMIMAT0000157Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00801935mmu-miR-3068-3pmiRNAMIMAT0014843Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00804404mmu-miR-30c-5pmiRNAMIMAT0000514Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00849425mmu-miR-590-3pmiRNAMIMAT0004896Tom1l1mRNA71943Prediction0.2202
Tom1l1RAID00876028mmu-miR-181d-5pmiRNAMIMAT0004324Tom1l1mRNA71943Prediction0.2381
Tom1l1RAID00901171mmu-miR-374b-5pmiRNAMIMAT0003727Tom1l1mRNA71943Prediction0.2202
Tom1l1RAID00912809mmu-miR-7092-5pmiRNAMIMAT0028090Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID00954317mmu-miR-181a-5pmiRNAMIMAT0000210Tom1l1mRNA71943NGS (Next Generation Sequencing)//Prediction0.6478
Tom1l1RAID01119896mmu-miR-30b-5pmiRNAMIMAT0000130Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01226324mmu-miR-181c-5pmiRNAMIMAT0000674Tom1l1mRNA71943Prediction0.2202
Tom1l1RAID01281827mmu-miR-684miRNAMIMAT0003462Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01483199mmu-miR-30a-5pmiRNAMIMAT0000128Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01489047mmu-miR-7220-3pmiRNAMIMAT0028409Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01489773mmu-miR-129-5pmiRNAMIMAT0000209Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01521343mmu-miR-126a-3pmiRNAMIMAT0000138Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01560392mmu-miR-9768-5pmiRNAMIMAT0036459Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01568937mmu-miR-323-3pmiRNAMIMAT0000551Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01722290mmu-miR-653-5pmiRNAMIMAT0004943Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01740948mmu-miR-743a-5pmiRNAMIMAT0017263Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01786693mmu-miR-543-3pmiRNAMIMAT0003168Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID01880133mmu-miR-328-3pmiRNAMIMAT0000565Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02018230mmu-miR-211-5pmiRNAMIMAT0000668Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02021526mmu-miR-5626-5pmiRNAMIMAT0022381Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02037982mmu-miR-873a-5pmiRNAMIMAT0004936Tom1l1mRNA71943Prediction0.2381
Tom1l1RAID02180930mmu-miR-31-5pmiRNAMIMAT0000538Tom1l1mRNA71943Prediction0.2202
Tom1l1RAID02202600mmu-miR-7670-5pmiRNAMIMAT0029846Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02234775mmu-miR-3098-3pmiRNAMIMAT0014918Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02259135mmu-miR-485-5pmiRNAMIMAT0003128Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02341842mmu-miR-26a-5pmiRNAMIMAT0000533Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02378467mmu-miR-93-3pmiRNAMIMAT0004636Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02406445mmu-miR-669gmiRNAMIMAT0005832Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02553842mmu-miR-409-3pmiRNAMIMAT0001090Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02604907mmu-miR-758-3pmiRNAMIMAT0003889Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02734283mmu-miR-30d-5pmiRNAMIMAT0000515Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02823687mmu-miR-5124amiRNAMIMAT0020634Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02875435mmu-miR-129-2-3pmiRNAMIMAT0000544Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02916034mmu-miR-144-3pmiRNAMIMAT0000156Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID02940827mmu-miR-215-3pmiRNAMIMAT0017169Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03006472mmu-miR-495-3pmiRNAMIMAT0003456Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03015193mmu-miR-1192miRNAMIMAT0005850Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03043725mmu-miR-871-5pmiRNAMIMAT0004841Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03094058mmu-miR-882miRNAMIMAT0004847Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03096244mmu-miR-30e-5pmiRNAMIMAT0000248Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03153330mmu-miR-6344miRNAMIMAT0025087Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03354951mmu-miR-199b-5pmiRNAMIMAT0000672Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03358892mmu-miR-181b-5pmiRNAMIMAT0000673Tom1l1mRNA71943Prediction0.2202
Tom1l1RAID03478585mmu-miR-6900-5pmiRNAMIMAT0027700Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03563069mmu-miR-6370miRNAMIMAT0025114Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03631105mmu-miR-124-3pmiRNAMIMAT0000134Tom1l1mRNA71943Reporter Assay//RT-PCR//Microarray//Prediction0.9594
Tom1l1RAID03667933mmu-miR-7b-3pmiRNAMIMAT0017071Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03765871mmu-miR-381-3pmiRNAMIMAT0000746Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03774995mmu-miR-691miRNAMIMAT0003470Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03790418mmu-miR-1981-5pmiRNAMIMAT0009458Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03807087mmu-miR-1971miRNAMIMAT0009446Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03928431mmu-miR-142a-5pmiRNAMIMAT0000154Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03940242mmu-miR-7a-2-3pmiRNAMIMAT0017070Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID03976341mmu-miR-376b-3pmiRNAMIMAT0001092Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID04031249mmu-miR-7222-5pmiRNAMIMAT0028412Tom1l1mRNA71943Prediction0.1828
Tom1l1RAID04035768mmu-miR-340-5pmiRNAMIMAT0004651Tom1l1mRNA71943NGS (Next Generation Sequencing)//Prediction0.6478
Tom1l1RAID04053719mmu-miR-33-5pmiRNAMIMAT0000667Tom1l1mRNA71943Prediction0.1828