DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Atg3; Apg3l ATTTA 258-1202 1281-1285

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000137 mmu-miR-126-5p 67841 Atg3 gcgcaugguuuucAUUAUUAc ||||||| agaauaauuucucUAAUAAUg 2 9 90 110 [mm9:16:45187944-45187964:+] 0.6734 140 7 -6.53 -0.7014 MIMAT0000137 mmu-miR-126-5p 67841 Atg3 gcgcAUGGUUUUCAUUAUUAc |||||| | |||||| uauuUACCAAUAAGAAUAAUu 2 18 78 98 [mm9:16:45187932-45187952:+] 0.6734 137 6 -10.14 -0.1784 MIMAT0000137 mmu-miR-126-5p 67841 Atg3 gcgcaugguuuucAUUAUUac |||||| agccuuauuuguuUAAUAAaa 3 9 153 173 [mm9:16:45188007-45188027:+] 0.6734 120 0 -1.71 -0.2491 MIMAT0003473 mmu-miR-133a* 67841 Atg3 uaaaccaaGGUA-AAAUGGUcg |||| ||||||| accauugaCCAUAUUUACCAau 3 14 67 88 [mm9:16:45187921-45187942:+] 0.6734 136 0 -12.15 -0.2301 MIMAT0003473 mmu-miR-133a* 67841 Atg3 uaaacCAAGGUAAAAUGGUCg ||||:| |||||| aaacuGUUCUA--CUACCAGc 2 17 137 155 [mm9:16:45187991-45188009:+] 0.6734 121 6 -16.35 -0.2298 MIMAT0004542 mmu-miR-191* 67841 Atg3 cccUUGCUU-UAGGU--UCAC-GUCg | :||| |||:| |||| ||| gcuAUUGAACAUCUACCAGUGUCAGa 2 20 258 283 [mm9:16:45188112-45188137:+] 0.5273 121 0 -13.92 -0.6262 MIMAT0004574 mmu-miR-294* 67841 Atg3 ucuaucccggagguAAAACUca |||||| ucuuaauuaaaaacUUUUGAaa 3 9 771 792 [mm9:16:45188625-45188646:+] 0.5166 120 0 -4.09 -0.1095 MIMAT0004579 mmu-miR-302a* 67841 Atg3 cguUCAU-GUUGG--U--GCAAAUUca | || ||:|| | :|||||| ucuACUACCAGCCUUAUUUGUUUAAua 3 20 144 170 [mm9:16:45187998-45188024:+] 0.6734 124 0 -9.81 -0.5002 MIMAT0004634 mmu-miR-31* 67841 Atg3 cuaccguuauacaaccGUAUCGu |||||| uuuuaaagaauuaauaCAUAGCu 2 8 41 63 [mm9:16:45187895-45187917:+] 0.6595 120 6 -7.79 -0.1290 MIMAT0000549 mmu-miR-322* 67841 Atg3 cacAACGUCGCGAAGUACAAa |||:|| |||||||| ugcUUGUAG---UUCAUGUUu 2 19 369 386 [mm9:16:45188223-45188240:+] 0.5286 154 7 -14.67 -0.3414 MIMAT0000558 mmu-miR-325* 67841 Atg3 ugugaaugacucguGGAUGAUcc :|||||| uaaauaaaaacuguUCUACUAcc 3 10 130 152 [mm9:16:45187984-45188006:+] 0.6734 121 0 -12.24 -0.1341 MIMAT0004640 mmu-miR-325 67841 Atg3 aacuauccuccacgaGUUAUUu |||||| auugaccauauuuacCAAUAAg 2 8 70 91 [mm9:16:45187924-45187945:+] 0.6734 120 6 -5.92 -0.3639 MIMAT0000569 mmu-miR-330* 67841 Atg3 agaGACGUC-CGG-GACACGA-AACg :||||| |:| ||||| ||| ugaUUGCAGAGUCAGGGUGCUAUUGa 2 21 240 265 [mm9:16:45188094-45188119:+] 0.5136 122 0 -22.74 -0.3638 MIMAT0000605 mmu-miR-350 67841 Atg3 cuuucacauacccgAAACACUu ||||||| guuuaauaaaaaugUUUGUGAa 2 9 163 184 [mm9:16:45188017-45188038:+] 0.6734 140 7 -8.48 -1.2238 MIMAT0004660 mmu-miR-19a* 67841 Atg3 caucACGUUGAUACGUUUUGAu |||| : | |||||| uuuaUGCAUUAAAUAAAAACUg 2 19 121 142 [mm9:16:45187975-45187996:+] 0.6734 122 6 -9.98 -0.3088 MIMAT0004660 mmu-miR-19a* 67841 Atg3 caucacguugauacgUUUUGAu |||||| uaucccucuuaauuaAAAACUu 2 8 765 786 [mm9:16:45188619-45188640:+] 0.5166 120 6 -5.25 -0.2164 MIMAT0004666 mmu-miR-33* 67841 Atg3 caCUACGUGACA-CCUUUGUAAc || ||: | |||||||| aaGAAACAUGCUCAGAAACAUUa 2 21 408 430 [mm9:16:45188262-45188284:+] 0.5300 147 7 -9.21 -0.6004 MIMAT0004670 mmu-miR-7a* 67841 Atg3 auaccGUCUGACACUAAACAAc ||| || | ||||||| acuacCAGCCU-U-AUUUGUUu 2 18 147 166 [mm9:16:45188001-45188020:+] 0.6734 149 7 -7.74 -1.2284 MIMAT0004670 mmu-miR-7a* 67841 Atg3 auaccgucuGACACUAAACAAc :| | ||||||| gguuuuguuUUUUUAUUUGUUu 2 14 638 659 [mm9:16:45188492-45188513:+] 0.4803 145 7 -6.73 -1.1624 MIMAT0004758 mmu-miR-463 67841 Atg3 gauggaauAUACCACAGAUAGu ||| | ||||||| ggagaggcUAUAGAGUCUAUCc 2 15 2 23 [mm9:16:45187856-45187877:+] 0.6455 154 7 -11.31 -0.8919 MIMAT0003170 mmu-miR-541 67841 Atg3 ucACACUGGUUGUAG-UCUUAGGGAa | | ||| :: | | ||||||| uuUUUAACCUUUGCCUAAAAUCCCUg 2 24 657 682 [mm9:16:45188511-45188536:+] 0.4803 150 7 -13.41 -0.8807 MIMAT0003170 mmu-miR-541 67841 Atg3 ucACACUGGUUGUAG--UC--UUAGGGAa ||| || |||| || |||||| uuUGUUUACAUCAUCUAAGAAUAUCCCUc 2 24 744 772 [mm9:16:45188598-45188626:+] 0.5314 125 6 -16.42 -0.2144 MIMAT0003173 mmu-miR-547 67841 Atg3 gaGUGAGU-UUCUACAUGGUUc ||:| | | || |||||| acCAUUGACCAUAUUUACCAAu 2 20 67 88 [mm9:16:45187921-45187942:+] 0.6734 126 6 -7.67 -0.2725 MIMAT0003373 mmu-miR-302b* 67841 Atg3 ucuuuCGUAAGGGU-ACAAUUUCa || |||: | | |||||| uuacuGC-UUCUGAUUUUUAAAGa 2 19 27 49 [mm9:16:45187881-45187903:+] 0.6595 123 6 -7.96 -0.3688 MIMAT0003375 mmu-miR-302c* 67841 Atg3 cguccauugggguacAAUUUCg |||||| uacugcuucugauuuUUAAAGa 2 8 28 49 [mm9:16:45187882-45187903:+] 0.6595 120 6 -7.01 -0.3807 MIMAT0003892 mmu-miR-762 67841 Atg3 cgaGACAGGGCCGGGGUCGGGg ||||:|: : ||||||: aaaCUGUUCUACUACCAGCCUu 2 20 137 158 [mm9:16:45187991-45188012:+] 0.6734 143 0 -24.21 -0.2872 MIMAT0015219 mmu-miR-3475 67841 Atg3 aagUUUGGUAC---ACGGAG-GUCu || || || |||||| ||| uaaAAUCCCUGUUAUGCCUCUCAGu 2 19 672 696 [mm9:16:45188526-45188550:+] 0.4803 121 0 -16.69 -0.3950 MIMAT0003739 mmu-miR-673-5p 67841 Atg3 gagguuccugGUCUCGACACUc || |||||||| agaauuaauaCAUAGCUGUGAc 2 13 47 68 [mm9:16:45187901-45187922:+] 0.6734 152 7 -14.23 -1.1858 MIMAT0003741 mmu-miR-674* 67841 Atg3 aacaagacucuacccUCGACAc |||||| aaagaauuaauacauAGCUGUg 2 8 45 66 [mm9:16:45187899-45187920:+] 0.6734 120 6 -11.04 -0.1285 MIMAT0003469 mmu-miR-690 67841 Atg3 aaaccaacacucggaUCGGAAa |||||| aacuguucuacuaccAGCCUUa 2 8 138 159 [mm9:16:45187992-45188013:+] 0.6734 120 6 -10.85 -0.3507 MIMAT0003496 mmu-miR-706 67841 Atg3 aaaaaacucugucccAAAGAGa |||||| uaccaauaagaauaaUUUCUCu 2 8 82 103 [mm9:16:45187936-45187957:+] 0.6734 120 6 -8.85 -0.3436 MIMAT0004236 mmu-miR-741 67841 Atg3 agAUG--UA-UCUUACCGUAGAGAGu ||| || ||||| ||:|||| uuUACCAAUAAGAAU--AAUUUCUCu 2 22 80 103 [mm9:16:45187934-45187957:+] 0.6734 136 0 -12.01 -0.1024 MIMAT0004845 mmu-miR-881* 67841 Atg3 ucuacacugacAAUAGAGAGAc | ||:||||| accaauaagaaUAAUUUCUCUa 2 12 83 104 [mm9:16:45187937-45187958:+] 0.6734 131 0 -8.09 -0.1594 MIMAT0004850 mmu-miR-883b-5p 67841 Atg3 acuGACGAUGGGUAAGAGUCAu |||:||: | ||||||| uccCUGUUAUGC-CUCUCAGUc 2 20 677 697 [mm9:16:45188531-45188551:+] 0.4803 157 7 -18.83 -0.2249 MIMAT0004882 mmu-miR-466f-3p 67841 Atg3 cacaCAUACACA---CACAC-AUAc || ||||| ||||| ||| auuaGUCUGUGUCAAGUGUGAUAUc 2 18 703 727 [mm9:16:45188557-45188581:+] 0.5314 124 0 -12.78 -0.6152 MIMAT0004861 mmu-miR-877 67841 Atg3 gggacgcgGUAGAGGAGAUg :| :|:||||| aauaagaaUAAUUUCUCUAa 2 13 86 105 [mm9:16:45187940-45187959:+] 0.6734 128 0 -9.85 -0.1424 MIMAT0005291 mmu-miR-582-5p 67841 Atg3 ucauugaccaacuugUUGACAu |||||| uaugcauuaaauaaaAACUGUu 2 8 123 144 [mm9:16:45187977-45187998:+] 0.6734 120 6 -6.09 -0.1802 MIMAT0005830 mmu-miR-466l 67841 Atg3 uuauACACACGU-AC----AUAAAUau |||| || || |||||| uagcUGUGACCAUUGACCAUAUUUAcc 3 19 59 85 [mm9:16:45187913-45187939:+] 0.6734 124 0 -3.66 -0.1787 MIMAT0005831 mmu-miR-669k 67841 Atg3 aacguacgcACAUAUACGUAu ||| ||||||| gggauuauaUGUUUAUGCAUu 2 13 110 130 [mm9:16:45187964-45187984:+] 0.6734 152 7 -10.21 -1.2885 MIMAT0005838 mmu-miR-669j 67841 Atg3 acaaacgUACACUCAUAUACGu ||| || ||||||: ucuaauaAUGGGAUUAUAUGUu 2 16 101 122 [mm9:16:45187955-45187976:+] 0.6734 143 0 -8.88 -0.1326 MIMAT0005839 mmu-miR-669f 67841 Atg3 uaugCACACACACAU-ACA-UAUAc || ||||| | ||| |||| auuaGUCUGUGUCAAGUGUGAUAUc 2 20 703 727 [mm9:16:45188557-45188581:+] 0.5314 126 0 -11.86 -0.6078 MIMAT0005840 mmu-miR-669i 67841 Atg3 cauacgUACACACAUAUACGu ||| | ||||||: cuaauaAUGGGAUUAUAUGUu 2 16 102 122 [mm9:16:45187956-45187976:+] 0.6734 135 0 -7.06 -0.1326 MIMAT0005842 mmu-miR-669h-3p 67841 Atg3 acacguACACACAUAUACGUAu | | ||| ||||||| ugggauUAUAUGUUUAUGCAUu 2 17 109 130 [mm9:16:45187963-45187984:+] 0.6734 156 7 -10.23 -1.2868 MIMAT0005846 mmu-miR-467f 67841 Atg3 acAUCCACACACA---CACA-UAUa || || ||||| |||| ||| auUA-GUCUGUGUCAAGUGUGAUAu 2 20 703 726 [mm9:16:45188557-45188580:+] 0.5314 120 0 -14.56 -0.3527 MIMAT0005851 mmu-miR-1193 67841 Atg3 cuAUCAU-UUUGCCCACUGGau || || | | |||||| auUAAUACAUAGCUGUGACCau 3 20 50 71 [mm9:16:45187904-45187925:+] 0.6734 126 0 -8.93 -0.1005 MIMAT0007873 mmu-miR-1896 67841 Atg3 gaggAGUGGGUGGUAGUCU-CUc |: ||| |::||||| || agggUUUCCC-CUGUCAGACGAu 2 19 219 240 [mm9:16:45188073-45188094:+] 0.4924 120 0 -15.40 -0.3004 MIMAT0007875 mmu-miR-1898 67841 Atg3 cuagggGACACUUGGAACUGGa |||||| | |||||| acauagCUGUGACCAUUGACCa 2 17 56 77 [mm9:16:45187910-45187931:+] 0.6734 140 6 -21.38 -0.2358 MIMAT0007878 mmu-miR-1894-3p 67841 Atg3 gagggaAGUGGGAGAGGGAACg | |: : :||||||| caagugUGAUAUCUUCCCUUGu 2 17 715 736 [mm9:16:45188569-45188590:+] 0.5314 144 7 -15.47 -0.7644 MIMAT0009400 mmu-miR-1936 67841 Atg3 cgguCAAGUGUCGUCCAGUCAAu | |:::| :: ||||||| cuuuGCUUGUAUUGUGUCAGUUc 2 20 537 559 [mm9:16:45188391-45188413:+] 0.5382 151 7 -10.16 -0.6866 MIMAT0009407 mmu-miR-1942 67841 Atg3 guuggucuacuucUGUAGACu ||||||| uuguccucucccuACAUCUGc 2 9 344 364 [mm9:16:45188198-45188218:+] 0.5273 140 7 -10.59 -0.3257 MIMAT0009415 mmu-miR-1948 67841 Atg3 gacaugcucacGAGACGGAUUu ||:||||||| uuguuuuuaacCUUUGCCUAAa 2 12 654 675 [mm9:16:45188508-45188529:+] 0.4803 151 7 -17.51 -1.1483 MIMAT0009431 mmu-miR-1958 67841 Atg3 ugAAU-GACGAAGGU--GAAA-GGAu ||| :||:||::| |||| ||| uuUUAUUUGUUUUUAACCUUUGCCUa 2 21 648 673 [mm9:16:45188502-45188527:+] 0.4803 126 0 -14.68 -1.0435 MIMAT0009431 mmu-miR-1958 67841 Atg3 ugaAUGACG-AA-GGU--GAA-AGGAu |||| | || ||| ||| |||| cccUACUCCAUUCCCAGCCUUGUCCUc 2 20 325 351 [mm9:16:45188179-45188205:+] 0.5273 120 0 -11.28 -0.2135 MIMAT0009435 mmu-miR-1962 67841 Atg3 uacACAGGGUCACGGUCGGAGa |||:|:| | |||||||: aacUGUUCUACUACCAGCCUUa 2 20 138 159 [mm9:16:45187992-45188013:+] 0.6734 155 0 -19.98 -0.3137 MIMAT0011222 mmu-miR-2146 67841 Atg3 guguacCUUG-GGAAGAGGUg |||: :|||||:| caauaaGAAUAAUUUCUCUAa 2 15 85 105 [mm9:16:45187939-45187959:+] 0.6734 129 0 -11.23 -0.2186 MIMAT0015645 mmu-miR-3473 67841 Atg3 ccGACUCGGUAGAGAGGu ||| | ::||||||| gcCUGUG-UGUCUCUCCc 2 17 311 327 [mm9:16:45188165-45188181:+] 0.5273 150 7 -15.37 -0.2083 MIMAT0000126 mmu-miR-27b 67841 Atg3 cgUCUUGAAUCGG---UGACACUu ||||:| | | :|||||| aaAGAAUUAAUACAUAGCUGUGAc 2 20 45 68 [mm9:16:45187899-45187922:+] 0.6734 134 6 -12.67 -0.2283 MIMAT0000128 mmu-miR-30a 67841 Atg3 gaaggucAGCUCCUACAAAUGu || | ||||||| cuugucuUCCAUUUUGUUUACa 2 16 732 753 [mm9:16:45188586-45188607:+] 0.5314 143 7 -15.46 -1.2530 MIMAT0000128 mmu-miR-30a 67841 Atg3 gaaggucagcuccUACAAAUGu |||||||: auaaugggauuauAUGUUUAUg 2 10 105 126 [mm9:16:45187959-45187980:+] 0.6734 129 0 -7.73 -0.1278 MIMAT0000128 mmu-miR-30a 67841 Atg3 gaaGGUCAGCUCCUACAAAUgu |||| | |||||| cuaCCAGCCUUAUUUGUUUAau 3 20 148 169 [mm9:16:45188002-45188023:+] 0.6734 127 0 -11.10 -0.2392 MIMAT0000130 mmu-miR-30b 67841 Atg3 ucgacucacauccuACAAAUGu ||||||| cuugucuuccauuuUGUUUACa 2 9 732 753 [mm9:16:45188586-45188607:+] 0.5314 140 7 -8.97 -1.2552 MIMAT0000130 mmu-miR-30b 67841 Atg3 ucgACUCACAUCCUACAAAUGu ||:| || |||||||: uaaUGGGAUUA-UAUGUUUAUg 2 20 106 126 [mm9:16:45187960-45187980:+] 0.6734 137 0 -8.46 -0.1253 MIMAT0000130 mmu-miR-30b 67841 Atg3 ucgacucacauccuACAAAUgu |||||| cuaccagccuuauuUGUUUAau 3 9 148 169 [mm9:16:45188002-45188023:+] 0.6734 120 0 -3.09 -0.2392 MIMAT0000144 mmu-miR-132 67841 Atg3 gcugguaccgacaucUGACAAu |||||| augcauuaaauaaaaACUGUUc 2 8 124 145 [mm9:16:45187978-45187999:+] 0.6734 120 6 -5.86 -0.2542 MIMAT0000150 mmu-miR-138 67841 Atg3 gccgGACUAAGUGUUGUGGUCGa ||| ||| :| :|||||| aaaaCUG-UUC-UACUACCAGCc 2 20 136 156 [mm9:16:45187990-45188010:+] 0.6734 139 6 -17.07 -0.2751 MIMAT0000163 mmu-miR-153 67841 Atg3 cuagugAAAACACUGAUACGUu || | || :|||||| augggaUUAUAUGUUUAUGCAu 2 17 108 129 [mm9:16:45187962-45187983:+] 0.6734 140 6 -11.84 -0.3312 MIMAT0000165 mmu-miR-155 67841 Atg3 ugggGAUAGUGUUAAU-CGUAAUu :||| |:: ||| |||||| gggaUUAU-AUGUUUAUGCAUUAa 2 20 110 132 [mm9:16:45187964-45187986:+] 0.6734 125 6 -10.58 -1.3212 MIMAT0000211 mmu-miR-182 67841 Atg3 gccACAC-UCAAGA-UGGUA-ACGGUUu | || ||| || ||::| |||||| guuUCUGAAGUGCUAACUGUAUGCCAAg 2 23 383 410 [mm9:16:45188237-45188264:+] 0.5300 132 6 -15.13 -0.5776 MIMAT0000212 mmu-miR-183 67841 Atg3 ucACUUAAG-AUGGUCAC-GGUAu | ||| | || | ||| |||| aaUUAAUACAUAGCUGUGACCAUu 2 21 49 72 [mm9:16:45187903-45187926:+] 0.6734 123 0 -9.73 -0.9514 MIMAT0000214 mmu-miR-185 67841 Atg3 aguccuuGACGGAAAGAGAGGu |||: | ||||||| ugccagcCUGUGUGUCUCUCCc 2 16 306 327 [mm9:16:45188160-45188181:+] 0.5273 155 7 -19.43 -0.2103 MIMAT0000247 mmu-miR-143 67841 Atg3 cucgaugucACGAAGUAGAgu | | |||||| cauuuuguuUACAUCAUCUaa 3 13 741 761 [mm9:16:45188595-45188615:+] 0.5314 124 0 -8.27 -0.1002 MIMAT0000248 mmu-miR-30e 67841 Atg3 gaaggucAGUUCCUACAAAUGu || | ||||||| cuugucuUCCAUUUUGUUUACa 2 16 732 753 [mm9:16:45188586-45188607:+] 0.5314 143 7 -15.62 -1.2530 MIMAT0000248 mmu-miR-30e 67841 Atg3 gaaggucaguuccUACAAAUGu |||||||: auaaugggauuauAUGUUUAUg 2 10 105 126 [mm9:16:45187959-45187980:+] 0.6734 129 0 -6.21 -0.1278 MIMAT0000248 mmu-miR-30e 67841 Atg3 gaaGGUCAGUUCCUACAAAUgu |||| | |||||| cuaCCAGCCUUAUUUGUUUAau 3 20 148 169 [mm9:16:45188002-45188023:+] 0.6734 127 0 -11.66 -0.2392 MIMAT0000514 mmu-miR-30c 67841 Atg3 cgacucucacauccuACAAAUGu ||||||| ccuugucuuccauuuUGUUUACa 2 9 731 753 [mm9:16:45188585-45188607:+] 0.5314 140 7 -8.86 -1.2552 MIMAT0000514 mmu-miR-30c 67841 Atg3 cgACUCUCACAUCCUACAAAUGu ||:|| | | |||||||: aaUGGGAUUAU---AUGUUUAUg 2 22 107 126 [mm9:16:45187961-45187980:+] 0.6734 137 0 -8.91 -0.1253 MIMAT0000514 mmu-miR-30c 67841 Atg3 cgacucucacauccuACAAAUgu |||||| acuaccagccuuauuUGUUUAau 3 9 147 169 [mm9:16:45188001-45188023:+] 0.6734 120 0 -4.64 -0.2392 MIMAT0000515 mmu-miR-30d 67841 Atg3 gaaggucagccccuACAAAUGu ||||||| cuugucuuccauuuUGUUUACa 2 9 732 753 [mm9:16:45188586-45188607:+] 0.5314 140 7 -15.46 -1.2541 MIMAT0000515 mmu-miR-30d 67841 Atg3 gaaggucagccccUACAAAUGu |||||||: auaaugggauuauAUGUUUAUg 2 10 105 126 [mm9:16:45187959-45187980:+] 0.6734 129 0 -10.80 -0.1290 MIMAT0000515 mmu-miR-30d 67841 Atg3 gaaGGUCAGCCCCUACAAAUgu |||| | |||||| cuaCCAGCCUUAUUUGUUUAau 3 20 148 169 [mm9:16:45188002-45188023:+] 0.6734 127 0 -11.10 -0.2392 MIMAT0000516 mmu-miR-148a 67841 Atg3 uguuucAAGACAUCACG--UGACu ||||| ||||| |||| ucauguUUCUGAAGUGCUAACUGu 2 17 379 402 [mm9:16:45188233-45188256:+] 0.5286 120 0 -18.27 -0.3703 MIMAT0000518 mmu-miR-196a 67841 Atg3 ggGUUGUUG-UACUUUGAUGGau :|| ||| :| |||||| aaUAAAAACUGUUCUACUACCag 3 21 132 154 [mm9:16:45187986-45188008:+] 0.6734 131 0 -11.02 -0.1091 MIMAT0000537 mmu-miR-27a 67841 Atg3 cgcCUUGAAUCGG---UGACACUu |||:| | | :|||||| aaaGAAUUAAUACAUAGCUGUGAc 2 19 45 68 [mm9:16:45187899-45187922:+] 0.6734 129 6 -10.91 -0.2283 MIMAT0000659 mmu-miR-212 67841 Atg3 accggcacugaccucUGACAAu |||||| augcauuaaauaaaaACUGUUc 2 8 124 145 [mm9:16:45187978-45187999:+] 0.6734 120 6 -6.20 -0.2497 MIMAT0000662 mmu-miR-216a 67841 Atg3 agugucaacggucgACUCUAAu ||:|||| aauuucucuaauaaUGGGAUUa 2 9 95 116 [mm9:16:45187949-45187970:+] 0.6734 124 0 -9.44 -0.1939 MIMAT0000677 mmu-miR-7a 67841 Atg3 ugUUGUUUUAGUGAUCAGAAGGu :|:| || || ||||||| guGAUAUCUUCCCUUGUCUUCCa 2 22 720 742 [mm9:16:45188574-45188596:+] 0.5314 157 7 -16.75 -1.1841 MIMAT0000678 mmu-miR-7b 67841 Atg3 ugUUGUUUUAGUGUUCAGAAGGu :|:| || | ||||||| guGAUAUCUUCCCUUGUCUUCCa 2 22 720 742 [mm9:16:45188574-45188596:+] 0.5314 149 7 -15.84 -1.1841 MIMAT0000746 mmu-miR-381 67841 Atg3 ugUCUCUCGAACGGGAACAUAu :|:|| : | : ||||||| aaGGGGAAUCUUUGCUUGUAUu 2 21 528 549 [mm9:16:45188382-45188403:+] 0.5382 152 7 -13.97 -0.3596 MIMAT0004745 mmu-miR-384-5p 67841 Atg3 uguAACGGAUCCU-UAACAAAUGu |||:|| | |||||||| cccUUGUCUUCCAUUUUGUUUACa 2 21 730 753 [mm9:16:45188584-45188607:+] 0.5314 155 7 -15.59 -1.2541 MIMAT0004745 mmu-miR-384-5p 67841 Atg3 uguaacggAUCCU--UA-ACAAAUGu |:||| || ||||||: ucuaauaaUGGGAUUAUAUGUUUAUg 2 16 101 126 [mm9:16:45187955-45187980:+] 0.6734 133 0 -8.90 -0.1278 MIMAT0004745 mmu-miR-384-5p 67841 Atg3 uguaaCGGAUCCUUAACAAAUgu |||| | ||||||| uaccaGCCU--UAUUUGUUUAau 3 19 149 169 [mm9:16:45188003-45188023:+] 0.6734 131 0 -11.45 -0.2392 MIMAT0004745 mmu-miR-384-5p 67841 Atg3 ugUAACGGAUCCUUAACAA-AUGu ||| || || |||| ||| gcAUUAAAUAAAAACUGUUCUACu 2 22 126 149 [mm9:16:45187980-45188003:+] 0.6734 121 0 -5.41 -1.1200 MIMAT0001081 mmu-miR-196b 67841 Atg3 ggGUUGUUGUC-CUUUGAUGGau :|| ||| | |||||| aaUAAAAACUGUUCUACUACCag 3 21 132 154 [mm9:16:45187986-45188008:+] 0.6734 127 0 -9.95 -0.1081 MIMAT0001091 mmu-miR-410 67841 Atg3 uguccgguagacacAAUAUAa |||||| cucuaauaaugggaUUAUAUg 2 8 100 120 [mm9:16:45187954-45187974:+] 0.6734 120 6 -4.15 -0.1193 MIMAT0004747 mmu-miR-411 67841 Atg3 gcaugcgauaugccAGAUGAu |||||| uaaauaaaaacuguUCUACUa 2 8 130 150 [mm9:16:45187984-45188004:+] 0.6734 120 6 -10.41 -0.1311 MIMAT0001533 mmu-miR-448 67841 Atg3 uaCCCUGUAGGAUGUAUACGUu ||||: : |:: |||||| auGGGAUUAUAUGUUUAUGCAu 2 21 108 129 [mm9:16:45187962-45187983:+] 0.6734 128 6 -16.69 -0.3339 MIMAT0003128 mmu-miR-485 67841 Atg3 cuUAAGUAGUGCCGGUCGGAGa :||| :|| |||||||: cuGUUC--UACUACCAGCCUUa 2 21 140 159 [mm9:16:45187994-45188013:+] 0.6734 137 0 -15.76 -0.3137 MIMAT0003168 mmu-miR-543 67841 Atg3 uucuucacguggcgcUUACAAa |||||| uauuuguuuaauaaaAAUGUUu 2 8 158 179 [mm9:16:45188012-45188033:+] 0.6734 120 6 -4.25 -0.1272 MIMAT0003169 mmu-miR-539 67841 Atg3 uguGUGGUUCCUAUUAAAGAGg || :||| |||||||||| uacCAAUAAGAAUAAUUUCUCu 2 20 82 103 [mm9:16:45187936-45187957:+] 0.6734 175 7 -17.86 -1.2926 MIMAT0003182 mmu-miR-494 67841 Atg3 cucCAAAGGGCACAUACAAAGu | || : || ||||||| uguGCUUGUAGUUCAUGUUUCu 2 20 367 388 [mm9:16:45188221-45188242:+] 0.5286 151 7 -12.56 -0.2618 MIMAT0003182 mmu-miR-494 67841 Atg3 cucCAAAGGGCACAUACAAAgu |||| : |||||| uuuGUUUAAUAAAAAUGUUUgu 3 20 160 181 [mm9:16:45188014-45188035:+] 0.6734 123 0 -4.38 -0.1140 MIMAT0003727 mmu-miR-374 67841 Atg3 gugaaucguccaacaUAAUAUa |||||| uucucuaauaaugggAUUAUAu 2 8 98 119 [mm9:16:45187952-45187973:+] 0.6734 120 6 -6.05 -0.1112 MIMAT0003456 mmu-miR-495 67841 Atg3 uucuucacguggUACAAACAaa |||||||| uguuuaauaaaaAUGUUUGUga 3 11 162 183 [mm9:16:45188016-45188037:+] 0.6734 130 0 -7.74 -0.2367 MIMAT0003456 mmu-miR-495 67841 Atg3 uucuucacgUGGUACAAACAAa :|| | |||||| cuacuaccaGCCUUAUUUGUUu 2 14 145 166 [mm9:16:45187999-45188020:+] 0.6734 121 6 -8.93 -0.2527 MIMAT0003456 mmu-miR-495 67841 Atg3 uucuucacgugguacAAACAAa |||||| gguuuuguuuuuuuaUUUGUUu 2 8 638 659 [mm9:16:45188492-45188513:+] 0.4803 120 6 -3.94 -0.1171 MIMAT0004847 mmu-miR-882 67841 Atg3 ugauuacgcgauugAGAGAGGa ||||||| ugccagccugugugUCUCUCCc 2 9 306 327 [mm9:16:45188160-45188181:+] 0.5273 140 7 -16.15 -0.2122 MIMAT0004869 mmu-miR-421 67841 Atg3 cgcGGGUUAAUUACAGACAACUa |::|||||| || |||| ccuCUUAAUUAAAAACUUUUGAa 2 21 769 791 [mm9:16:45188623-45188645:+] 0.5166 136 0 -10.10 -0.1421 MIMAT0005850 mmu-miR-1192 67841 Atg3 uuAAACCAGACAAACAAACAAa ||| ||:| ||| |||||| ggUUUUGUUUUUUUAUUUGUUu 2 21 638 659 [mm9:16:45188492-45188513:+] 0.4803 148 6 -9.92 -0.1148 MIMAT0005850 mmu-miR-1192 67841 Atg3 uuaaaccagacaaACAAACAaa ||||||| uguuuaauaaaaaUGUUUGUga 3 10 162 183 [mm9:16:45188016-45188037:+] 0.6734 125 0 -5.95 -0.2410 MIMAT0005850 mmu-miR-1192 67841 Atg3 uuaaaccagacaaacAAACAAa |||||| cuacuaccagccuuaUUUGUUu 2 8 145 166 [mm9:16:45187999-45188020:+] 0.6734 120 6 -4.42 -0.2482

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G058652 Atg3 Mus musculus 67841 23804767

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Atg3 mmu-miR-136star beg:231 end:244 pic:3' TTCTGAGTAAACTCTGCTACTA 5'& |||||||||| &5' ------------AGACGATGAT 3' Atg3 mmu-miR-1962 beg:138 end:159 pic:3' TACACAGGGTCACGGTCGGAGA 5'& |||.|.| |||||||. &5' ---TGTTCTACTACCAGCCTT- 3' Atg3 mmu-miR-1962 beg:328 end:346 pic:3' TACACAGGGTCACGGTCGGAGA 5'& .||| |||||||. &5' ------TCCATTCCCAGCCTT- 3' Atg3 mmu-miR-7a beg:726 end:743 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& || || |||||||| &5' ---------TCCCTTGTCTTCCA 3' Atg3 mcmv-miR-m108-1 beg:407 end:426 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& || ||. ||||||| &5' ------GAAACATGCTCAGAAA 3' Atg3 mcmv-miR-m108-1 beg:264 end:285 pic:3' GCTGTGCTCGGTGGCAGTCTTT 5'& |||. ||| .||||||| &5' --ACATCTACCAGTGTCAGAA- 3' Atg3 mcmv-miR-m21-1 beg:214 end:233 pic:3' GCCGAAC-TTGCACAGGGGATA 5'& | |. || ||||||.| &5' ------GTAGGGTTTCCCCTGT 3' Atg3 mcmv-miR-m21-1 beg:718 end:737 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||| ||||.|.| &5' -----TGATATCTTCCCTTGT 3' Atg3 mcmv-miR-m22-1 beg:472 end:487 pic:3' ACCGGAGCCATGCC-TGCCCCTT 5'& ||| |.||||| &5' ----------ACGATATGGGGA- 3' Atg3 mghv-miR-M1-9 beg:704 end:724 pic:3' TTTTTCCAGGTCC-GTTTACACT 5'& |||.. | |||.||||| &5' ------GTCTGTGTCAAGTGTGA 3' Atg3 mmu-let-7g beg:22 end:37 pic:3' TTGACATGTTTGATGATGGAGT 5'& ||.||||.|.|| &5' ---------AATTACTGCTTC- 3' Atg3 mmu-miR-101astar beg:699 end:721 pic:3' CGTAGTCGTGACACTATTGACT 5'& .||.||. ||||| || || &5' -TATTAGT-CTGTGTCAAGTG- 3' Atg3 mmu-miR-1190 beg:519 end:544 pic:3' CTGT-C-TCCCCTTGGAGTCGACT 5'& ||| | |||||||.||. ||| &5' GACTTGAAGGGGAATCTTTGCT-- 3' Atg3 mmu-miR-125a-3p beg:414 end:436 pic:3' CCGAGGGTTCTTGG-AGTGGACA 5'& |||| |||| |.|||||| &5' -GCTC---AGAAACATTACCTGT 3' Atg3 mmu-miR-1274a beg:510 end:529 pic:3' ACCGCGGACTTGT--CCCTGGACT 5'& |||.| |||||.||| &5' --------GAATAGTGGGACTTGA 3' Atg3 mmu-miR-138 beg:297 end:313 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& .||| | |..||||| &5' -------GTTC-C-ATGCCAGC- 3' Atg3 mmu-miR-138 beg:137 end:156 pic:3' GCCGGACTAAGTGTTGTGGTCGA 5'& ||| ||| .| .|||||| &5' ----CTG-TTC-TACTACCAGC- 3' Atg3 mmu-miR-142-3p beg:411 end:432 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |||. ||||||.||| &5' --CATGCTCA--GAAACATTAC- 3' Atg3 mmu-miR-143 beg:182 end:201 pic:3' CTCGATGTCACGAAGTAGAGT 5'& ||| || .|||||.|| &5' GAGAT---GT-TTTCATTTC- 3' Atg3 mmu-miR-149 beg:235 end:255 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& || ||| .|| |||.|||. &5' --GA-TGATTGCA--GAGTCAGG 3' Atg3 mmu-miR-155 beg:110 end:133 pic:3' TGGGGATAGTGTT--AAT-CGTAATT 5'& ||.|.| ||| ||||||| &5' ------ATTATATGTTTATGCATTAA 3' Atg3 mmu-miR-17star beg:352 end:379 pic:3' GATGTTCACGGGA-GTG-ACGTCA 5'& ||||| |||.|| ..| ||.||| &5' CTACATCTGCTCTGTGCTTGTAGT 3' Atg3 mmu-miR-185 beg:306 end:327 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| |||. | ||||||| &5' -CAGC--CTGTGTGTCTCTCC- 3' Atg3 mmu-miR-1930 beg:610 end:623 pic:3' TGCGACGTCCATGATACCTCCA 5'& .||.|||||| &5' -----------GCTGTGGAGG- 3' Atg3 mmu-miR-1948 beg:653 end:676 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| ||.|||||||| &5' -TGTTTTTAACCTTTGCCTAAA 3' Atg3 mmu-miR-1961 beg:20 end:37 pic:3' AAGATTGATGATGGAGT 5'& ||||.||||.|.|| &5' --CTAATTACTGCTTC- 3' Atg3 mmu-miR-1968 beg:55 end:66 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& |.|||||. &5' ---------------ATAGCTGT- 3' Atg3 mmu-miR-1969 beg:727 end:747 pic:3' TGGGTACAATTTCAG-AGGTAGAA 5'& ||| ||| |||||.|| &5' -CCCTT------GTCTTCCATTTT 3' Atg3 mmu-miR-2140 beg:449 end:471 pic:3' TGGTGGTTCTAGACGTGGA 5'& |.|||| ||||. |.| &5' ATCACCCAGATTACTTCTT 3' Atg3 mmu-miR-218-1star beg:365 end:387 pic:3' CCACGAACTGCCTTGGTACAAA 5'& ||||||| .||||||| &5' -GTGCTTGTAGT--TCATGTTT 3' Atg3 mmu-miR-23a beg:704 end:725 pic:3' CCTTTAGGGACCG-TTACACTA 5'& |.||. || |.|||||| &5' ---AGTCTGTGTCAAGTGTGAT 3' Atg3 mmu-miR-23b beg:704 end:725 pic:3' CCATTAGGGACCG-TTACACTA 5'& ||.||. || |.|||||| &5' --TAGTCTGTGTCAAGTGTGAT 3' Atg3 mmu-miR-27a beg:58 end:68 pic:3' CGCCTTGAATCGGTGACACTT 5'& .|||||| &5' -------------GCTGTGA- 3' Atg3 mmu-miR-291b-5p beg:621 end:642 pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& |||| ||| |||||.|. &5' -GAGAAT-CCTGATCTTTGGTT 3' Atg3 mmu-miR-296-3p beg:327 end:346 pic:3' CCTCTCGGAGGT--GGGTTGGGAG 5'& ||||| ||||.||.| &5' -------CTCCATTCCCAGCCTT- 3' Atg3 mmu-miR-29b beg:245 end:262 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& || ||| ||||||| &5' ------GAG-TCAG--GGTGCTA 3' Atg3 mmu-miR-29c beg:245 end:262 pic:3' ATTGGCTAAAGTTTACCACGAT 5'& || ||| ||||||| &5' -----GAG-TCAG--GGTGCTA 3' Atg3 mmu-miR-3099 beg:332 end:358 pic:3' AGGGGTTGGAGA--GAGATCGGAT 5'& |.||||.|||. |||| |||| &5' TTCCCAGCCTTGTCCTCTC-CCTA 3' Atg3 mmu-miR-30a beg:734 end:754 pic:3' GAAGGTCAGCTCCTACAAATGT 5'& |||||| |. |||||||| &5' CTTCCATTT-----TGTTTACA 3' Atg3 mmu-miR-30d beg:734 end:754 pic:3' GAAGGTCAGCCCCTACAAATGT 5'& |||||| |. |||||||| &5' CTTCCATTT-----TGTTTACA 3' Atg3 mmu-miR-30e beg:734 end:754 pic:3' GAAGGTCAGTTCCTACAAATGT 5'& |||||| |. |||||||| &5' CTTCCATTT-----TGTTTACA 3' Atg3 mmu-miR-322star beg:365 end:387 pic:3' CAC-AACGTCGCGAAGTACAAA 5'& ||| |||.||. |||||||| &5' GTGCTTGTAGT---TCATGTTT 3' Atg3 mmu-miR-331-5p beg:65 end:84 pic:3' CCTAGGGACCCTGGTATGGATC 5'& || |||||||..|| &5' ----CCATT-GACCATATTTA- 3' Atg3 mmu-miR-3473 beg:307 end:327 pic:3' CCGACTCGG-----TAGAGAGGT 5'& |||| .||||||| &5' -----AGCCTGTGTGTCTCTCC- 3' Atg3 mmu-miR-378star beg:238 end:257 pic:3' TGTGTCCTGGAC-CTCAGTCCTC 5'& ||.. ||||||||. &5' ------GATTGCAGAGTCAGGG- 3' Atg3 mmu-miR-382 beg:78 end:101 pic:3' GCTTAGGTGGTG---CTTGTTGAAG 5'& ||..|||| |||.||.||| &5' ---ATTTACCAATAAGAATAATTTC 3' Atg3 mmu-miR-383 beg:20 end:43 pic:3' TCGGTGTCAGTG--GAAGACTAGA 5'& || .| |.|| ||||||||.| &5' --CC-TAATTACTGCTTCTGATTT 3' Atg3 mmu-miR-384-5p beg:106 end:126 pic:3' TGTAACGGATCCTTA---ACAAATGT 5'& |.||| ||||||. &5' --------TGGGATTATATGTTTAT- 3' Atg3 mmu-miR-384-5p beg:730 end:754 pic:3' TGTAACGGATCCTT-AACAAATGT 5'& |||.|| ||||||||| &5' ---TTGTCTTCCATTTTGTTTACA 3' Atg3 mmu-miR-423-5p beg:678 end:695 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& .|.| ||||.|||| &5' -------TGTTA--TGCCTCTCA 3' Atg3 mmu-miR-448 beg:108 end:129 pic:3' TACCCTGTAGGATGTATACGTT 5'& |||||. |. |||||| &5' -TGGGATTATATGTTTATGCA- 3' Atg3 mmu-miR-450a-3p beg:330 end:342 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |||.||||. &5' ------------CATTCCCAG- 3' Atg3 mmu-miR-450b-5p beg:229 end:251 pic:3' ATAAGTCCTTGTATGACGTTTT 5'& |||| |.||||.|. &5' ---TCAGACGATGATTGCAGAG 3' Atg3 mmu-miR-465a-3p beg:618 end:635 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .||.| .||||||| &5' -------GGAGAA-TCCTGATC 3' Atg3 mmu-miR-465b-3p beg:618 end:635 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .||.| .||||||| &5' -------GGAGAA-TCCTGATC 3' Atg3 mmu-miR-465c-3p beg:618 end:635 pic:3' AGATGAATCTTTCCGGGACTAG 5'& .||.| .||||||| &5' -------GGAGAA-TCCTGATC 3' Atg3 mmu-miR-485 beg:139 end:159 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& .||| .|| |||||||. &5' --GTTC--TACTACCAGCCTT- 3' Atg3 mmu-miR-485 beg:330 end:346 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& ||. |||||||. &5' --------CATTCCCAGCCTT- 3' Atg3 mmu-miR-496 beg:402 end:422 pic:3' CTCTAACCGGTACAT--TATGAGT 5'& |||| | ||.|||| &5' -------GCCAAGAAACATGCTCA 3' Atg3 mmu-miR-511 beg:237 end:260 pic:3' ACTCACGTCTCGTTTTC-CGTA 5'& ||| |||||||. |..| || &5' TGATTGCAGAGTCAGGGTGC-- 3' Atg3 mmu-miR-539 beg:82 end:104 pic:3' TGTGTGGT---TCCTATTAAAGAGG 5'& |||| || ||||||||||. &5' ----ACCAATAAGAATAATTTCTCT 3' Atg3 mmu-miR-543 beg:474 end:492 pic:3' TTCTTCACGTGGCGCTTACAAA 5'& | .| |.|||||| &5' -------GATATGGGGATGTTT 3' Atg3 mmu-miR-544 beg:232 end:252 pic:3' CTCGAAC-GATTTTTACGTCTTA 5'& | | .| ||||||.| &5' ------GACGATGATTGCAGAGT 3' Atg3 mmu-miR-546 beg:438 end:456 pic:3' CTGAGGCACGGTGGTA 5'& ||.|. |||||.|| &5' GATTTATTGCCATCA- 3' Atg3 mmu-miR-669k beg:105 end:130 pic:3' AACGTACGC------ACATATACGTAT 5'& ||| | ||| ||||||| &5' ----ATGGGATTATATGTTTATGCAT- 3' Atg3 mmu-miR-672 beg:143 end:160 pic:3' AGTGTGTGTCATG-TGGTTGGAGT 5'& ||| ||||.|||.| &5' ----------TACTACCAGCCTTA 3' Atg3 mmu-miR-673-5p beg:600 end:620 pic:3' GAGGTTCCTGGTC-TCGACACTC 5'& || ||. |||||||. &5' ---CAT--ACTTTAAGCTGTGG- 3' Atg3 mmu-miR-681 beg:297 end:319 pic:3' TCGACGG-ACGGTCGCTC-CGAC 5'& |.| || ||||||| | |. &5' -GTT-CCATGCCAGCCTGTGT-- 3' Atg3 mmu-miR-682 beg:230 end:249 pic:3' GTCTGAAGTGACACTGACGTC 5'& ||||| |||.||||| &5' CAGACGA-----TGATTGCAG 3' Atg3 mmu-miR-688 beg:308 end:318 pic:3' CTTATTCATCAGCGGACGCT 5'& |||||.| &5' ------------GCCTGTG- 3' Atg3 mmu-miR-697 beg:472 end:491 pic:3' AGAGGTGTCCTGGTCCTACAA 5'& ||. |. .||||||| &5' -----ACGATATGGGGATGTT 3' Atg3 mmu-miR-706 beg:480 end:496 pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& |.||. ||||.||| &5' ------GGGAT---GTTTTTCT 3' Atg3 mmu-miR-710 beg:517 end:528 pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& ..|||||| &5' -------------GGGACTTG- 3' Atg3 mmu-miR-741 beg:307 end:326 pic:3' AGATGTATCTTAC-CGTAGAGAGT 5'& || || |..|||||| &5' -------AGCCTGTGTGTCTCTC- 3' Atg3 mmu-miR-743b-5p beg:251 end:269 pic:3' ACTACCTGTGGTCAGACTTGT 5'& ||. |.| .|||||| &5' ----GGGTGCTA--TTGAACA 3' Atg3 mmu-miR-762 beg:296 end:315 pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& |||.|| . ||||||. &5' ----TGTTCCA-TGCCAGCCT- 3' Atg3 mmu-miR-7b beg:717 end:743 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& . |.| || | |||||||| &5' GTGATATCTTCCCTTGTCTTCCA 3' Atg3 mmu-miR-872star beg:360 end:382 pic:3' TCCTCCGATGACGT---TATCAAGT 5'& ||| |||. .||||||| &5' -----GCT-CTGTGCTTGTAGTTCA 3' Atg3 mmu-miR-877 beg:339 end:359 pic:3' GGGACGCGGTAGAGGAGATG 5'& ||.||. || ||||| |||| &5' CCTTGT-CC-TCTCC-CTAC 3' Atg3 mmu-miR-883a-5p beg:677 end:697 pic:3' CATTGACGATGAAGAGAGTCGT 5'& |||.||. |||||||. &5' ----CTGTTATGCCTCTCAGT- 3' Atg3 mmu-miR-883b-5p beg:678 end:697 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& |||.||. | ||||||| &5' ---CTGTTATGCC-TCTCAGT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Atg3 RAID00000652 mmu-miR-96-3p miRNA MIMAT0017021 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID00080665 mmu-miR-196b-5p miRNA MIMAT0001081 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID00278991 mmu-miR-381-3p miRNA MIMAT0000746 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID00364909 mmu-miR-7119-3p miRNA MIMAT0028136 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID00403075 mmu-miR-27a-3p miRNA MIMAT0000537 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID00423434 mmu-miR-411-5p miRNA MIMAT0004747 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID00529474 mmu-miR-7006-3p miRNA MIMAT0027917 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID00530346 mmu-miR-30e-5p miRNA MIMAT0000248 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID00712909 mmu-miR-669h-3p miRNA MIMAT0005842 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID00879849 mmu-miR-30f miRNA MIMAT0025179 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID00948588 mmu-miR-185-5p miRNA MIMAT0000214 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01172356 mmu-miR-410-3p miRNA MIMAT0001091 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID01364121 mmu-miR-7226-3p miRNA MIMAT0028421 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01430622 mmu-miR-1894-3p miRNA MIMAT0007878 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01463911 mmu-miR-495-3p miRNA MIMAT0003456 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01470574 mmu-miR-148a-3p miRNA MIMAT0000516 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01504117 mmu-miR-374b-5p miRNA MIMAT0003727 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID01552659 mmu-miR-384-5p miRNA MIMAT0004745 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID01624209 mmu-miR-7039-5p miRNA MIMAT0027982 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01711654 mmu-miR-182-5p miRNA MIMAT0000211 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID01801945 mmu-miR-30b-5p miRNA MIMAT0000130 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID01895405 mmu-miR-30c-5p miRNA MIMAT0000514 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID01999880 mmu-miR-143-3p miRNA MIMAT0000247 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02023955 mmu-miR-3073a-5p miRNA MIMAT0014854 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02156574 mmu-miR-7116-5p miRNA MIMAT0028129 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02188000 mmu-miR-212-3p miRNA MIMAT0000659 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID02239496 mmu-miR-3073b-5p miRNA MIMAT0022375 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02261121 mmu-miR-153-3p miRNA MIMAT0000163 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID02284308 mmu-miR-7646-3p miRNA MIMAT0029795 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02549720 mmu-miR-1948-3p miRNA MIMAT0009415 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02607142 mmu-miR-216a-5p miRNA MIMAT0000662 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID02616343 mmu-miR-3475-5p miRNA MIMAT0026642 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02653081 mmu-miR-485-5p miRNA MIMAT0003128 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID02743928 mmu-miR-30a-5p miRNA MIMAT0000128 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID02747241 mmu-miR-543-3p miRNA MIMAT0003168 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02791777 mmu-miR-183-5p miRNA MIMAT0000212 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID02831122 mmu-miR-7a-5p miRNA MIMAT0000677 Atg3 mRNA 67841 Prediction 0.2202 Atg3 RAID02910939 mmu-miR-421-3p miRNA MIMAT0004869 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID02945956 mmu-miR-539-5p miRNA MIMAT0003169 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID02992571 mmu-miR-30d-5p miRNA MIMAT0000515 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID02994335 mmu-miR-132-3p miRNA MIMAT0000144 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID03020343 mmu-miR-1192 miRNA MIMAT0005850 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03061582 mmu-miR-7a-1-3p miRNA MIMAT0004670 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03175282 mmu-miR-448-3p miRNA MIMAT0001533 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID03246560 mmu-miR-3094-3p miRNA MIMAT0014910 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03269235 mmu-miR-1966-3p miRNA MIMAT0022952 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03285715 mmu-miR-6919-3p miRNA MIMAT0027739 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03348556 mmu-miR-155-5p miRNA MIMAT0000165 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6478 Atg3 RAID03404166 mmu-miR-7035-5p miRNA MIMAT0027974 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03727335 mmu-miR-882 miRNA MIMAT0004847 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03742188 mmu-miR-494-3p miRNA MIMAT0003182 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03752309 mmu-miR-3083-5p miRNA MIMAT0014874 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03755964 mmu-miR-138-5p miRNA MIMAT0000150 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID03799116 mmu-miR-669k-3p miRNA MIMAT0005831 Atg3 mRNA 67841 Prediction 0.1828 Atg3 RAID03965063 mmu-miR-7b-5p miRNA MIMAT0000678 Atg3 mRNA 67841 Prediction 0.2202 Atg3 RAID03966940 mmu-miR-196a-5p miRNA MIMAT0000518 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID04061627 mmu-miR-27b-3p miRNA MIMAT0000126 Atg3 mRNA 67841 CLIP-seq//Prediction 0.6308 Atg3 RAID05170590 G730013B05Rik lncRNA 619312 Atg3 protein 67841 Microarray//RNA-seq 0.6606