Cdca3
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004522mmu-miR-27b*14793Cdca3caAGUGGUUAG-UC-GAUUC-GAGa | :|:| || || ||||| ||| ccUAGCUACUCAAGCCUAAGCCUCg221458482[mm9:6:124783616-124783640:+]0.51971220-13.71-0.2908
MIMAT0000367mmu-miR-291a-5p14793Cdca3ucucuccCGGAGGUGAAACUAc ||:| :||||||| uuauguaGCUUAAGCUUUGAUg216252273[mm9:6:124783410-124783431:+]0.53371517-17.85-0.1488
MIMAT0004578mmu-miR-300*14793Cdca3uguuuccuAUUGGAGAGAAGUu |::|| ||||||| ucugccuuUGGCC-CUCUUCAc215284304[mm9:6:124783442-124783462:+]0.52271487-14.03-0.2109
MIMAT0004620mmu-let-7a*14793Cdca3ccuuucugucaucuaACAUAUc |||||| guuuuauguguuuccUGUAUAu2898119[mm9:6:124783256-124783277:+]0.54241206-2.78-0.1413
MIMAT0004621mmu-let-7b*14793Cdca3cccuuccgucauccaACAUAUc |||||| guuuuauguguuuccUGUAUAu2898119[mm9:6:124783256-124783277:+]0.54241206-3.37-0.1413
MIMAT0005439mmu-let-7c-2*14793Cdca3ccuuucugucaucuaACAUAUc |||||| guuuuauguguuuccUGUAUAu2898119[mm9:6:124783256-124783277:+]0.54241206-2.78-0.1413
MIMAT0004623mmu-let-7f*14793Cdca3cccuuccguuaucuaACAUAUc |||||| guuuuauguguuuccUGUAUAu2898119[mm9:6:124783256-124783277:+]0.54241206-2.33-0.1413
MIMAT0002105mmu-miR-46414793Cdca3auAGAGUGUCUUAUUUGA-ACCAu ||||| :| | |||| |||| ccUCUCA-GGCACCAACUCUGGUa2225274[mm9:6:124783210-124783232:+]0.51061270-17.64-0.4907
MIMAT0002108mmu-miR-467a-1*14793Cdca3cacauccACACACA-UACAUAUa ||||| | |||||| uguuuuaUGUGUUUCCUGUAUAu21697119[mm9:6:124783255-124783277:+]0.54241266-11.49-0.1345
MIMAT0003171mmu-miR-542-5p14793Cdca3agcacuguACUACUAGGGG-CUc ||||| ||||| || uuaagcuuUGAUG-UCCCCAGAg215261282[mm9:6:124783419-124783440:+]0.53371200-20.87-0.3374
MIMAT0003189mmu-miR-291b-5p14793Cdca3ccucuccCGGAGGUGAAACUAg ||:| :||||||| uuauguaGCUUAAGCUUUGAUg216252273[mm9:6:124783410-124783431:+]0.53371517-13.54-0.1488
MIMAT0003373mmu-miR-302b*14793Cdca3ucuUUCGUAAGGG---UACAAUUUCa | |::||:|| || |||||| uuuAUGUGUUUCCUGUAUAUUAAAGu221100125[mm9:6:124783258-124783283:+]0.54241316-11.89-0.1056
MIMAT0003375mmu-miR-302c*14793Cdca3cgucCAUUGGG-GUACAAUUUCg || ||: :|| |||||| auguGUUUCCUGUAUAUUAAAGu219103125[mm9:6:124783261-124783283:+]0.54241256-11.09-0.1046
MIMAT0003734mmu-miR-66714793Cdca3gaAC-CCGACCCACCGUCCA-CAGu || ||||||| | |||| ||| ccUGUGGCUGGG-GAAAGGUGGUCa222431454[mm9:6:124783589-124783612:+]0.53071300-29.79-0.2643
MIMAT0003895mmu-miR-764-3p14793Cdca3ugucaACGGUG-AUAC-CGGAGGa |||||| | || |||||| ucuccUGCCACUUCUGAGCCUCCu218228251[mm9:6:124783386-124783409:+]0.53371326-26.98-0.6883
MIMAT0014816mmu-miR-309914793Cdca3agGGGUUGGAGAGAGA-UCGGAu :|| :|| || ||| ||||| ucUCCUGCCACU-UCUGAGCCUc221228249[mm9:6:124783386-124783407:+]0.53371260-20.68-0.6467
MIMAT0004826mmu-miR-146b*14793Cdca3ugGUCUUGACUCAGGGAUCCCg :|||| ||: :||||||| uaUAGAA-UGGCAUCCUAGGGg221184204[mm9:6:124783342-124783362:+]0.53371587-22.54-0.2589
MIMAT0003478mmu-miR-467b*14793Cdca3cacAACCACACACA-UACAUAUa || ||||| | |||||| uguUUUAUGUGUUUCCUGUAUAu22097119[mm9:6:124783255-124783277:+]0.54241306-12.22-0.1345
MIMAT0003510mmu-miR-71714793Cdca3ucucUUCCAUAGAGAC-AGACUc ||| | | ||| ||||| accaAAGAAAGCCCUGUUCUGAu2192850[mm9:6:124783186-124783208:+]0.51061220-10.26-0.1210
MIMAT0004236mmu-miR-74114793Cdca3agaUGUAUCUUACCGUAGAGAGu || | |:|| | ||||||| gagACCU-GGAUAG-AUCUCUCu221210230[mm9:6:124783368-124783388:+]0.53371527-15.41-0.1591
MIMAT0004842mmu-miR-87914793Cdca3ccGAAUCUCGAUAUUCGGAGa || | ||| |||||||| uaCUCA-AGC-CUAAGCCUCg220464482[mm9:6:124783622-124783640:+]0.51971517-15.02-0.2673
MIMAT0004845mmu-miR-881*14793Cdca3ucUACACU-GAC--A-AUAGAGAGAc :|| || ||| | |||||||| cuGUGAGACCUGGAUAGAUCUCUCUc221206231[mm9:6:124783364-124783389:+]0.53371497-18.79-0.1831
MIMAT0004882mmu-miR-466f-3p14793Cdca3cacaCAUACACACACACAUAc | :| | ||||||||| caccGGGUCU-UGUGUGUAUa218168187[mm9:6:124783326-124783345:+]0.53371517-11.66-0.2930
MIMAT0004887mmu-miR-467d*14793Cdca3cacauccACACACA-UACAUAUa ||||| | |||||| uguuuuaUGUGUUUCCUGUAUAu21697119[mm9:6:124783255-124783277:+]0.54241266-11.49-0.1345
MIMAT0004897mmu-miR-654-5p14793Cdca3uguguaCAAGACG-U--CGAAUGGu |||: || | ||||||| guuuggGUUUAGCUAUUGCUUACCu217310334[mm9:6:124783468-124783492:+]0.52671467-14.50-0.8069
MIMAT0004942mmu-miR-59814793Cdca3auUGCUACUGCUGCUACUGCAu |: || :|| ||||||| gcAUCAUAUUGAACAUGACGUg221490511[mm9:6:124783648-124783669:+]0.51501527-13.38-0.1993
MIMAT0005294mmu-miR-467e*14793Cdca3uauauccACACACA-UACAUAUa ||||| | |||||| uguuuuaUGUGUUUCCUGUAUAu21697119[mm9:6:124783255-124783277:+]0.54241266-10.86-0.1345
MIMAT0005834mmu-miR-466i14793Cdca3aucacaCAUACACACACACAUa | :| | |||||||| uacaccGGGUCU-UGUGUGUAu217166186[mm9:6:124783324-124783344:+]0.53371467-12.35-0.4973
MIMAT0005839mmu-miR-669f14793Cdca3uaugcACACACACA-UACAUAUAc | ||||| | ||||||| uguuuUAUGUGUUUCCUGUAUAUu21997120[mm9:6:124783255-124783278:+]0.54241577-10.71-0.8359
MIMAT0005846mmu-miR-467f14793Cdca3acaUCCACACACACACAUAUa :||| | |||||||||| accGGGUCU-UGUGUGUAUAg219169188[mm9:6:124783327-124783346:+]0.53371647-16.83-0.2404
MIMAT0005846mmu-miR-467f14793Cdca3acauccACACACA-CACAUAUa ||||| | |||||| guuuuaUGUGUUUCCUGUAUAu21698119[mm9:6:124783256-124783277:+]0.54241266-10.80-0.1345
MIMAT0005857mmu-miR-119614793Cdca3ucCGUCUCCGUCCAUCUAaa |:| | | |||||| cuGUAUAUUAAAGUAGAUga319112131[mm9:6:124783270-124783289:+]0.57431260-5.32-0.4717
MIMAT0007878mmu-miR-1894-3p14793Cdca3gagGGAAGUGGGAGAGGGA-ACg ||| |: ||||||||| || uugCCUACG-CCUCUCCCUGUGg220416437[mm9:6:124783574-124783595:+]0.53071330-26.00-0.1835
MIMAT0009391mmu-miR-192814793Cdca3cucgaccguUACAUCGa ||||||| gccuccuuuAUGUAGCu29245261[mm9:6:124783403-124783419:+]0.53371407-10.19-0.6425
MIMAT0009399mmu-miR-193514793Cdca3ucuCUA-GGCGGUC-GGAGACGGa ||| :| |||| ||||||| uuuGAUGUCCCCAGAGCUCUGCCu220267290[mm9:6:124783425-124783448:+]0.53371577-29.56-0.3108
MIMAT0009419mmu-miR-669m14793Cdca3uaUACAA---ACAC-ACCUACAUAUa ||||| |||| | |||||| aaAUGUUUUAUGUGUUUCCUGUAUAu22194119[mm9:6:124783252-124783277:+]0.54241266-13.89-0.1345
MIMAT0009424mmu-miR-195314793Cdca3gucUUCGGACU-CUUGAAAGGGu ||| :| | || ||||||| aauAAGAUUCAUGAUCUUUCCCu220391413[mm9:6:124783549-124783571:+]0.54171587-15.50-0.8481
MIMAT0009431mmu-miR-195814793Cdca3ugaaugacgaaggugAAAGGAu |||||| aaaauguuuuaugugUUUCCUg2893114[mm9:6:124783251-124783272:+]0.54241206-11.36-0.2538
MIMAT0011214mmu-miR-213814793Cdca3uaaggcGGUU-CGGGCAAGGGaa :||| |:: |||||| aaacacUCAACGUUAGUUCCCcu317366388[mm9:6:124783524-124783546:+]0.54171310-15.00-0.1151
MIMAT0015645mmu-miR-347314793Cdca3ccgacUCGGUAGAGAGGu || : ||||||| uggauAGAUCUCUCUCCu214216233[mm9:6:124783374-124783391:+]0.53371457-15.21-0.1532
MIMAT0000142mmu-miR-914793Cdca3aguaugucGAUCUAUUGGUUUCu | ||: ||||||| gucaucccCAAGGGCACCAAAGa2161335[mm9:6:124783171-124783193:+]0.56471477-17.01-0.4784
MIMAT0000214mmu-miR-18514793Cdca3agucCUUGACGGAAAGAGAGGu |:|: | | ||||||| accuGGAUAG-AUCUCUCUCCu219213233[mm9:6:124783371-124783391:+]0.53371447-15.33-0.1532
MIMAT0000219mmu-miR-2414793Cdca3gacaAGGAC-GACUUGACUCGGu ||||| | ||||||| ucucUCCUGCCACUUCUGAGCCu219226248[mm9:6:124783384-124783406:+]0.53371497-23.50-0.7781
MIMAT0000559mmu-miR-32614793Cdca3ugaccucCUUCCCGGGUCUCc || | ||||||| aagcuuuGAUGUCCCCAGAGc215263283[mm9:6:124783421-124783441:+]0.53371467-13.18-0.1594
MIMAT0004642mmu-miR-33014793Cdca3cgGAUUCUG---UGUCCGGGUCUCu :|||| : |:: ||||||| gcUUAAGCUUUGAUGUCCCCAGAGc221259283[mm9:6:124783417-124783441:+]0.53371437-18.77-0.1609
MIMAT0000663mmu-miR-21814793Cdca3uguacCAAUCUAG-UUCG-UGUu |||||| | |||| ||| aagaaGUUAGAGCAAAGCUACAc217148170[mm9:6:124783306-124783328:+]0.53371270-13.29-0.3136
MIMAT0000669mmu-miR-22114793Cdca3cuuugggucgucuguUACAUCGa ||||||| uucugagccuccuuuAUGUAGCu29239261[mm9:6:124783397-124783419:+]0.53371407-14.98-0.6462
MIMAT0000670mmu-miR-22214793Cdca3ugggucaucggucUACAUCGa ||||||| cugagccuccuuuAUGUAGCu29241261[mm9:6:124783399-124783419:+]0.53371407-15.28-0.6425
MIMAT0000748mmu-miR-38314793Cdca3ucGGUGUCAGUGGAAG-ACUAGa |:| | | | ||| ||||| ccCUAAAAUAAGAUUCAUGAUCu221385407[mm9:6:124783543-124783565:+]0.54171200-10.73-0.8566
MIMAT0003182mmu-miR-49414793Cdca3cuccaaAGGGCACAUACAAAGu | :: | |:|||||| uuaaaaUGUUUUAUGUGUUUCc21791112[mm9:6:124783249-124783270:+]0.54241326-8.46-0.2203
MIMAT0004847mmu-miR-88214793Cdca3ugauuacgcgaUUGAGAGAGGa | |||||||| gaccuggauagAUCUCUCUCCu212212233[mm9:6:124783370-124783391:+]0.53371477-19.24-0.1547
MIMAT0004936mmu-miR-87314793Cdca3uccucugaguguucAAGGACg |||||| aauguuuuauguguUUCCUGu2895115[mm9:6:124783253-124783273:+]0.54241206-11.02-0.1535
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G009926Cdca3Mus musculus14793
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Cdca3mmu-miR-9beg:20end:36pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||. |||||||| &5' ----------AGGGCACCAAAGA 3'
Cdca3mmu-miR-598beg:497end:512pic:3' ATTGCTACTGCTGCTACTGCAT 5'& || |||||||. &5' ----------GAACATGACGTG 3'
Cdca3mmu-miR-326beg:267end:283pic:3' TGACCTCCTTCCCGGGTCTCC 5'& || | ||||||| &5' -------GATGTCCCCAGAG- 3'
Cdca3mmu-miR-300starbeg:289end:304pic:3' TGTTTCCTATTGGAGAGAAGTT 5'& |..|| ||||||| &5' --------TGGCC-CTCTTCA- 3'
Cdca3mmu-miR-509-5pbeg:0end:15pic:3' TACTAACGGTGTAAGACCTCAT 5'& || . ||||||| &5' ------GCTGTG--CTGGAGT- 3'
Cdca3mmu-miR-291b-5pbeg:256end:273pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& ||.| .||||||| &5' -------GCTTAAGCTTTGAT- 3'
Cdca3mmu-miR-291a-5pbeg:256end:274pic:3' TCTCTCCCGGAGGTGAAACTAC 5'& ||.| .|||||||| &5' -------GCTTAAGCTTTGATG 3'
Cdca3mmu-miR-467fbeg:169end:188pic:3' ACATCCACACACACACATATA 5'& .||| |||||||||| &5' ---GGGTCT-TGTGTGTATA- 3'
Cdca3mmu-miR-466ibeg:175end:187pic:3' ATCACACATACACACACACATA 5'& ||||||||| &5' -------------TGTGTGTAT 3'
Cdca3mcmv-miR-m22-1beg:424end:446pic:3' ACCGGAGCC--ATGCCTGCCCCTT 5'& |||| |..|| .|||||| &5' ---CCTCTCCCTGTGGCTGGGGAA 3'
Cdca3mmu-let-7bbeg:458end:482pic:3' TTGGTGTG-TTGGATGATGGAGT 5'& |.|.|| |.|||| .|||| &5' AGCTACTCAAGCCTAA-GCCTC- 3'
Cdca3mmu-miR-105beg:59end:80pic:3' TGGTGTTCGTAGACTCGTGAACC 5'& |||| | |||| |.|||||| &5' ACCAA---C-TCTG-GTACTTGG 3'
Cdca3mmu-miR-125b-3pbeg:458end:480pic:3' TCGA-GGGTTCTCGGATTGGGCA 5'& |||| |.|| ||||||| || &5' AGCTACTCA--AGCCTAAGCC-- 3'
Cdca3mmu-miR-1274abeg:188end:209pic:3' ACCGC-GGACTTGTCCCTGGACT 5'& |||| ||| ||||.|||| &5' TGGCATCCT----AGGGGCCTG- 3'
Cdca3mmu-miR-143beg:438end:459pic:3' CTCGATGTCACGAAGTAGAGT 5'& |.| .||| ||||||| &5' GGGAAA-GGTGG-TCATCTC- 3'
Cdca3mmu-miR-1839-5pbeg:270end:292pic:3' GTTCTGGACAAGATAGATGGAA 5'& | || |||.|||| &5' ---GTCCCCAGAGCTCTGCCTT 3'
Cdca3mmu-miR-1928beg:240end:262pic:3' CTCGACCGT--TACATCGA 5'& |||| |||||||| &5' GAGCCTCCTTTATGTAGCT 3'
Cdca3mmu-miR-1929beg:175end:204pic:3' GAGACGAGATATTTC-----AGGATCTT 5'& | ||. ||||.| ||||||.. &5' -TGTGTG-TATAGAATGGCATCCTAGGG 3'
Cdca3mmu-miR-1935beg:270end:291pic:3' TCTCTAGGCGGTCG-GAGACGGA 5'& .||| |||| |||||||| &5' ----GTCC-CCAGAGCTCTGCCT 3'
Cdca3mmu-miR-1953beg:392end:413pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& ||| | ||| ||||||| &5' -AGATTCATGAT--CTTTCCC- 3'
Cdca3mmu-miR-1957beg:229end:240pic:3' CAGTATACGAGATGGTGAC 5'& ||.||||| &5' ----------CTGCCACT- 3'
Cdca3mmu-miR-1970beg:7end:30pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& ..||.| ||||||| |.||| &5' -GGAGTC-ATCCCCAAGGGCAC- 3'
Cdca3mmu-miR-1982starbeg:340end:363pic:3' GGAGGGGTCCT--GGGAGGGTT 5'& | ||||| |||||.|.| &5' --TTTCCAGGTCCCCCTCTCGA 3'
Cdca3mmu-miR-1982starbeg:49end:70pic:3' GGAGGGGTCC-TGGGAGGGTT 5'& ||| |.|||| ||| |.| &5' CCT-CTCAGGCACCAACTC-- 3'
Cdca3mmu-miR-19astarbeg:156end:167pic:3' CATCACGTTGATACGTTTTGAT 5'& |||||.||| &5' -------------GCAAAGCTA 3'
Cdca3mmu-miR-2141beg:417end:429pic:3' TTGAAAAGACTGTGGAGGA 5'& || ||.||||. &5' -------CT-ACGCCTCT- 3'
Cdca3mmu-miR-221beg:240end:262pic:3' CTTTGGGTCGTCTGT--TACATCGA 5'& |. ||| |||||||| &5' ----CTGAGCCTCCTTTATGTAGCT 3'
Cdca3mmu-miR-222beg:241end:262pic:3' TGGGTCATCGGTC----TACATCGA 5'& |||| |||||||| &5' -------AGCCTCCTTTATGTAGCT 3'
Cdca3mmu-miR-24beg:227end:248pic:3' GACAAGGACGACTT-GACTCGGT 5'& |||||| ||||||| &5' ----TCCTGCCACTTCTGAGCC- 3'
Cdca3mmu-miR-26abeg:60end:81pic:3' TCGGATAGGACCTAATGAACTT 5'& || | |||| ||||||.| &5' --CCAACTCTGG--TACTTGGA 3'
Cdca3mmu-miR-26bbeg:59end:81pic:3' TGGATAGGACTTAATGAACTT 5'& ||| | |||. ||||||.| &5' ACCAACTCTGG--TACTTGGA 3'
Cdca3mmu-miR-296-3pbeg:49end:71pic:3' CCTCTCGGAGG---TG-GGTTGGGAG 5'& ||||. .| |||||.|| &5' ------CCTCTCAGGCACCAACTCT- 3'
Cdca3mmu-miR-296-5pbeg:189end:208pic:3' TGTCCTAACTCCCCCCCGGGA 5'& || ||||||. &5' ---GGCATCCTA-GGGGCCT- 3'
Cdca3mmu-miR-322starbeg:94end:116pic:3' CACAACGT-CGCGAAGTACAAA 5'& |||| .| |.|.||| ||| &5' -TGTTTTATGTGTTTCCTGT-- 3'
Cdca3mmu-miR-330beg:263end:283pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||.| || . ||||||| &5' GCTTT-GATGTC--CCCAGAG- 3'
Cdca3mmu-miR-331-3pbeg:184end:206pic:3' AAGATCCTATCC--GGGTCCCCG 5'& ||| ||.| ||.|||||| &5' ---TAGAATGGCATCCTAGGGGC 3'
Cdca3mmu-miR-338-3pbeg:0end:13pic:3' GTTGTTTTAGTGACTACGACCT 5'& .||| ||||||| &5' ----------GCTG-TGCTGGA 3'
Cdca3mmu-miR-3473beg:284end:304pic:3' CCGAC--TCGGTAGAGAGGT 5'& || .||| ||||.|| &5' -GCCTTTGGCC--CTCTTCA 3'
Cdca3mmu-miR-3475beg:259end:282pic:3' AAGTTTGGTAC-ACGGAGGTCT 5'& |.||.|. || ||.| ||||| &5' -TTAAGCTTTGATGTCCCCAGA 3'
Cdca3mmu-miR-411starbeg:527end:548pic:3' CCAATCACCTGG--CAC-AATGTAT 5'& ||.|| ||| |||.||| &5' -------GGGCCTGGTGATTATATA 3'
Cdca3mmu-miR-432beg:329end:351pic:3' GACGGGTGACTAGATGAGGTTCT 5'& || || .| .||||.| &5' ---CCTGCTTGTAATTTCCAGG- 3'
Cdca3mmu-miR-450a-3pbeg:2end:23pic:3' TACTTACG-TTTC-GTAGGGGTTA 5'& .||| ..|| ||||||||| &5' ----GTGCTGGAGTCATCCCCAA- 3'
Cdca3mmu-miR-450a-3pbeg:262end:280pic:3' TACTTACGTTTC-GTAGGGGTTA 5'& || | ..||||||. &5' ------GCTTTGATGTCCCCAG- 3'
Cdca3mmu-miR-466d-3pbeg:171end:188pic:3' GATACACACGCACATACATAT 5'& || | |||.|||||| &5' ------GT-CTTGTGTGTATA 3'
Cdca3mmu-miR-466f-3pbeg:175end:187pic:3' CACACATACACACACACATAC 5'& ||||||||| &5' -----------TGTGTGTAT- 3'
Cdca3mmu-miR-466gbeg:506end:518pic:3' ACACACACGTACACAGACATA 5'& ||||||||. &5' -----------GTGTCTGTG- 3'
Cdca3mmu-miR-467estarbeg:169end:188pic:3' TATATCCACACACATACATATA 5'& .||| |||.|||||| &5' ----GGGTCT-TGTGTGTATA- 3'
Cdca3mmu-miR-654-5pbeg:313end:334pic:3' TGTGTACAAGACGT---CGAATGGT 5'& |||. || ||||||| &5' ------GTTTAGCTATTGCTTACC- 3'
Cdca3mmu-miR-681beg:503end:524pic:3' TCGAC-GGACGGTCGCTCCGAC 5'& || | ||.| |.||||.|| &5' ---TGACGTGTCTGTGAGGTTG 3'
Cdca3mmu-miR-688beg:196end:212pic:3' CTTATTCATCAGCGGACGCT 5'& ||| |||||.|| &5' -------TAGGGGCCTGTGA 3'
Cdca3mmu-miR-711beg:156end:179pic:3' GAATGTAGAGAGG-GGCCCAGGG 5'& .|| || |||||||.. &5' ---GCAAAGCTACACCGGGTCTT 3'
Cdca3mmu-miR-743b-5pbeg:484end:505pic:3' ACTACCTGTGGTCAGACTTGT 5'& |||.||.|| .|||||| &5' ---TGGGCATCATATTGAACA 3'
Cdca3mmu-miR-743b-5pbeg:231end:247pic:3' ACTACCTGTGGTC-AGACTTGT 5'& .||| |||||.| &5' --------GCCACTTCTGAGC- 3'
Cdca3mmu-miR-877beg:37end:57pic:3' GGGACGCGGTAGAGGAGATG 5'& |||||. |.. .|||||| | &5' CCCTGTTCTGATTCCTCT-C 3'
Cdca3mmu-miR-881starbeg:209end:231pic:3' TCTACACT-GACAA---TAGAGAGAC 5'& || ||| |||||||| &5' ------GACCTGGATAGATCTCTCT- 3'
Cdca3mmu-miR-882beg:212end:234pic:3' TGATTACGCGATTGAGAGAGGA 5'& ||.. | ||||||||| &5' -CTGGATAGAT--CTCTCTCCT 3'
Cdca3mcmv-miR-m21-1beg:371end:390pic:3' GCCGAACTTGCAC---AGGGGATA 5'& ||||| ||||||| &5' -------AACGTTAGTTCCCCTA- 3'
Cdca3mmu-miR-669fbeg:101end:119pic:3' TATGCACACACACATACATATAC 5'& ||.|||| ||||||| &5' -TATGTGTTTCC---TGTATAT- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Cdca3RAID00266671mmu-miR-9-5pmiRNAMIMAT0000142Cdca3mRNA14793Prediction0.1828
Cdca3RAID00282554mmu-miR-3572-5pmiRNAMIMAT0022986Cdca3mRNA14793Prediction0.1828
Cdca3RAID00445095mmu-miR-326-3pmiRNAMIMAT0000559Cdca3mRNA14793Prediction0.1828
Cdca3RAID00538702mmu-miR-654-5pmiRNAMIMAT0004897Cdca3mRNA14793Prediction0.1828
Cdca3RAID00568908mmu-miR-330-5pmiRNAMIMAT0004642Cdca3mRNA14793Prediction0.1828
Cdca3RAID00651038mmu-miR-221-3pmiRNAMIMAT0000669Cdca3mRNA14793Prediction0.1828
Cdca3RAID00703975mmu-miR-6369miRNAMIMAT0025113Cdca3mRNA14793Prediction0.1828
Cdca3RAID00866468mmu-miR-1953miRNAMIMAT0009424Cdca3mRNA14793Prediction0.1828
Cdca3RAID01107877mmu-miR-185-5pmiRNAMIMAT0000214Cdca3mRNA14793Prediction0.1828
Cdca3RAID01703369mmu-miR-6410miRNAMIMAT0025163Cdca3mRNA14793Prediction0.1828
Cdca3RAID01812533mmu-miR-1928miRNAMIMAT0009391Cdca3mRNA14793Prediction0.1828
Cdca3RAID01825322mmu-miR-5124bmiRNAMIMAT0025136Cdca3mRNA14793Prediction0.1828
Cdca3RAID01900158mmu-miR-669f-3pmiRNAMIMAT0005839Cdca3mRNA14793Prediction0.1828
Cdca3RAID01957775mmu-miR-383-5pmiRNAMIMAT0000748Cdca3mRNA14793Prediction0.1828
Cdca3RAID02083708mmu-miR-222-3pmiRNAMIMAT0000670Cdca3mRNA14793Prediction0.1828
Cdca3RAID02269553mmu-miR-6361miRNAMIMAT0025104Cdca3mRNA14793Prediction0.1828
Cdca3RAID02321044mmu-miR-494-3pmiRNAMIMAT0003182Cdca3mRNA14793CLIP-seq//Prediction0.6308
Cdca3RAID02327780mmu-miR-3058-5pmiRNAMIMAT0014813Cdca3mRNA14793Prediction0.1828
Cdca3RAID02690968mmu-miR-882miRNAMIMAT0004847Cdca3mRNA14793Prediction0.1828
Cdca3RAID02738492mmu-miR-669b-3pmiRNAMIMAT0017250Cdca3mRNA14793Prediction0.1828
Cdca3RAID02966446mmu-miR-218-5pmiRNAMIMAT0000663Cdca3mRNA14793Prediction0.1828
Cdca3RAID03064555mmu-miR-467a-3pmiRNAMIMAT0002108Cdca3mRNA14793Prediction0.1828
Cdca3RAID03165324mmu-miR-6413miRNAMIMAT0025166Cdca3mRNA14793Prediction0.1828
Cdca3RAID03314208mmu-miR-873a-5pmiRNAMIMAT0004936Cdca3mRNA14793CLIP-seq//Prediction0.6308
Cdca3RAID03875104mmu-miR-669c-3pmiRNAMIMAT0017253Cdca3mRNA14793Prediction0.1828
Cdca3RAID03988165mmu-miR-24-3pmiRNAMIMAT0000219Cdca3mRNA14793Prediction0.2202
Cdca3RAID04093061G730013B05RiklncRNA619312Cdca3protein14793Microarray//RNA-seq0.6606