DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence N4bp2 ATTTA 561-5597 6082-6086;6770-6774;6996-7000;7302-7306;7605-7609;7927-7931;8063-8067;8581-8585;8643-8647;9011-9015;9031-9035 N4bp2 WTATTTATW 561-5597 7603-7611 N4bp2 WWATTTAWW 561-5597 7603-7611;9029-9037 N4bp2 WWWATTTAWWW 561-5597 9028-9038 N4bp2 WWWWATTTAWWWW 561-5597 9027-9039

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT014416 mmu-miR-181a-5p Mus musculus N4bp2 333789 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT011459 mmu-miR-26a-5p Mus musculus N4bp2 333789 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004631 mmu-miR-29a* 333789 N4bp2 gacuuGUGGUUUUCUUU-AGUCa :||: : ||||| |||| guuuuUACUUGUAGAAAUUCAGu 2 18 49 71 [mm9:5:66217938-66217960:+] 0.5472 121 0 -12.36 -0.8695 MIMAT0002104 mmu-miR-463* 333789 N4bp2 uacuaccuguuguuUAAUCCau |||||| uucaaauguauuuuAUUAGGaa 3 9 82 103 [mm9:5:66217971-66217992:+] 0.5472 120 0 -6.36 -0.2615 MIMAT0002107 mmu-miR-466a-3p 333789 N4bp2 agaauacacacgcacaUACAUAu |||||| ucaguucuauuuucaaAUGUAUu 2 8 71 93 [mm9:5:66217960-66217982:+] 0.5472 120 6 -4.42 -0.2627 MIMAT0002108 mmu-miR-467a-1* 333789 N4bp2 cacauccacacacaUACAUAua |||||| aguucuauuuucaaAUGUAUuu 3 9 73 94 [mm9:5:66217962-66217983:+] 0.5472 120 0 -4.22 -0.2814 MIMAT0002109 mmu-miR-468 333789 N4bp2 gucuGUGUGCGUGU---AGUCAGUau :|| :|:| | ||||||| uuuuUACUUGUAGAAAUUCAGUCAgu 3 20 50 75 [mm9:5:66217939-66217964:+] 0.5472 130 0 -13.22 -0.1041 MIMAT0003186 mmu-miR-369-3p 333789 N4bp2 uuucuAGUUGGUACAUAAUAa |||| ||||||| | uauuuUCAA--AUGUAUUUUa 2 17 78 96 [mm9:5:66217967-66217985:+] 0.5472 125 0 -6.13 -0.1386 MIMAT0003474 mmu-miR-694 333789 N4bp2 gaAGUCCGUU---GUAAAAGUc |||| ||: :||||||| auUCAGUCAGUUCUAUUUUCAa 2 18 65 86 [mm9:5:66217954-66217975:+] 0.5472 152 7 -13.26 -1.2172 MIMAT0003478 mmu-miR-467b* 333789 N4bp2 cacaaccacacacaUACAUAua |||||| aguucuauuuucaaAUGUAUuu 3 9 73 94 [mm9:5:66217962-66217983:+] 0.5472 120 0 -4.22 -0.2814 MIMAT0004827 mmu-miR-297b-3p 333789 N4bp2 auacccauacacacaUACAUAu |||||| caguucuauuuucaaAUGUAUu 2 8 72 93 [mm9:5:66217961-66217982:+] 0.5472 120 6 -4.42 -0.2581 MIMAT0004864 mmu-miR-297a* 333789 N4bp2 auacccauacacacaUACAUAu |||||| caguucuauuuucaaAUGUAUu 2 8 72 93 [mm9:5:66217961-66217982:+] 0.5472 120 6 -4.42 -0.2581 MIMAT0004866 mmu-miR-297c* 333789 N4bp2 auacccauacacacaUACAUAu |||||| caguucuauuuucaaAUGUAUu 2 8 72 93 [mm9:5:66217961-66217982:+] 0.5472 120 6 -4.42 -0.2581 MIMAT0004876 mmu-miR-466b-3p 333789 N4bp2 agaauacacacgcacaUACAUAu |||||| ucaguucuauuuucaaAUGUAUu 2 8 71 93 [mm9:5:66217960-66217982:+] 0.5472 120 6 -4.42 -0.2627 MIMAT0005453 mmu-miR-466b-3-3p 333789 N4bp2 agaauacacacgcacaUACAUAa |||||| ucaguucuauuuucaaAUGUAUu 2 8 71 93 [mm9:5:66217960-66217982:+] 0.5472 120 6 -5.15 -0.2627 MIMAT0004878 mmu-miR-466c-3p 333789 N4bp2 agaauacacacgcacaUACAUAu |||||| ucaguucuauuuucaaAUGUAUu 2 8 71 93 [mm9:5:66217960-66217982:+] 0.5472 120 6 -4.42 -0.2627 MIMAT0004880 mmu-miR-466e-3p 333789 N4bp2 agaauacacacgcacaUACAUAu |||||| ucaguucuauuuucaaAUGUAUu 2 8 71 93 [mm9:5:66217960-66217982:+] 0.5472 120 6 -4.42 -0.2627 MIMAT0004887 mmu-miR-467d* 333789 N4bp2 cacauccacacacaUACAUAua |||||| aguucuauuuucaaAUGUAUuu 3 9 73 94 [mm9:5:66217962-66217983:+] 0.5472 120 0 -4.22 -0.2814 MIMAT0004931 mmu-miR-466d-3p 333789 N4bp2 gauacacacgcacaUACAUAu |||||| aguucuauuuucaaAUGUAUu 2 8 73 93 [mm9:5:66217962-66217982:+] 0.5472 120 6 -4.42 -0.2627 MIMAT0004938 mmu-miR-875-3p 333789 N4bp2 guaucggAGUC---AUAAAAGUcc |||| |||||||| aauucagUCAGUUCUAUUUUCAaa 3 15 64 87 [mm9:5:66217953-66217976:+] 0.5472 133 0 -9.42 -0.2003 MIMAT0004938 mmu-miR-875-3p 333789 N4bp2 guaucggagUCAUAAAA-GUCc |||:|||| ||| aacaagaaaAGUGUUUUACAGa 2 13 109 130 [mm9:5:66217998-66218019:+] 0.5472 120 0 -12.48 -0.9682 MIMAT0005294 mmu-miR-467e* 333789 N4bp2 uauauccacacacaUACAUAua |||||| aguucuauuuucaaAUGUAUuu 3 9 73 94 [mm9:5:66217962-66217983:+] 0.5472 120 0 -4.22 -0.2814 MIMAT0005830 mmu-miR-466l 333789 N4bp2 uuAUACACACGUACAU-AAAUAu ||| | ||||| ||||| ucUAUUUUCAAAUGUAUUUUAUu 2 21 76 98 [mm9:5:66217965-66217987:+] 0.5472 124 0 -5.93 -1.0205 MIMAT0005853 mmu-miR-669e 333789 N4bp2 uaCUUGUACGUGUGUGUUCUgu |:| |||:| | |||||| uaGGA-AUGUA-AAACAAGAaa 3 21 98 117 [mm9:5:66217987-66218006:+] 0.5472 136 0 -13.33 -0.1764 MIMAT0005854 mmu-miR-467g 333789 N4bp2 uauauacacacacaUACAUAu |||||| aguucuauuuucaaAUGUAUu 2 8 73 93 [mm9:5:66217962-66217982:+] 0.5472 120 6 -4.42 -0.2627 MIMAT0009400 mmu-miR-1936 333789 N4bp2 cgguCAAGUGUCGUCCAGUCAAu || | | : ||||||| acuuGUAGAAAUUCAGUCAGUUc 2 20 55 77 [mm9:5:66217944-66217966:+] 0.5472 143 7 -10.74 -1.0194 MIMAT0009419 mmu-miR-669m 333789 N4bp2 uauacaaacacaccUACAUAua |||||| aguucuauuuucaaAUGUAUuu 3 9 73 94 [mm9:5:66217962-66217983:+] 0.5472 120 0 -3.92 -0.2765 MIMAT0009428 mmu-miR-1956 333789 N4bp2 aggcgacugagUCGGGACCUGa |||||||||| ----aaccuagAGCCCUGGACu 2 12 1 18 [mm9:5:66217890-66217907:+] 0.5613 155 7 -24.03 -0.6260 MIMAT0000146 mmu-miR-134 333789 N4bp2 ggGGAGACCAGUUGGUCAGUgu |:| | | | :|||||| uaCUUGUAGAAAUUCAGUCAgu 3 21 54 75 [mm9:5:66217943-66217964:+] 0.5472 132 0 -14.26 -0.1030 MIMAT0000210 mmu-miR-181a 333789 N4bp2 ugaguggcugucgcaaCUUACAa |||||| aaauguauuuuauuagGAAUGUa 2 8 85 107 [mm9:5:66217974-66217996:+] 0.5472 120 6 -8.07 -0.3932 MIMAT0000673 mmu-miR-181b 333789 N4bp2 uggguggcugucguuaCUUACAa |||||| aaauguauuuuauuagGAAUGUa 2 8 85 107 [mm9:5:66217974-66217996:+] 0.5472 120 6 -9.41 -0.3932 MIMAT0000674 mmu-miR-181c 333789 N4bp2 ugaguggcuguccaaCUUACAa |||||| aauguauuuuauuagGAAUGUa 2 8 86 107 [mm9:5:66217975-66217996:+] 0.5472 120 6 -6.62 -0.3932 MIMAT0000746 mmu-miR-381 333789 N4bp2 ugucucUCGAACGGGAACAUau :|:|| : |||||| gacguuGGUUUUUACUUGUAga 3 17 42 63 [mm9:5:66217931-66217952:+] 0.5472 132 0 -11.40 -0.1356 MIMAT0001076 mmu-miR-384-3p 333789 N4bp2 uaacacuUGUUAAA-GAUCCUUa ::| ||| :|||||| uucaaauGUAUUUUAUUAGGAAu 2 16 82 104 [mm9:5:66217971-66217993:+] 0.5472 134 6 -10.69 -0.1557 MIMAT0003168 mmu-miR-543 333789 N4bp2 uuCUUCACGUGGCGCUUACAaa | | | :|:: |||||| auGUAUUUUAUUAGGAAUGUaa 3 21 87 108 [mm9:5:66217976-66217997:+] 0.5472 128 0 -6.30 -0.2043 MIMAT0004324 mmu-miR-181d 333789 N4bp2 uggguggcuguuguuaCUUACAa |||||| aaauguauuuuauuagGAAUGUa 2 8 85 107 [mm9:5:66217974-66217996:+] 0.5472 120 6 -10.02 -0.3932 MIMAT0004896 mmu-miR-590-3p 333789 N4bp2 ugAUCGAAUAUG--UAU-UUUAAu |:|:|| ||| :|| ||||| guUGGUUUUUACUUGUAGAAAUUc 2 20 45 68 [mm9:5:66217934-66217957:+] 0.5472 126 0 -7.67 -0.7346

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G064959 N4bp2 Mus musculus 333789

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score N4bp2 RAID00100863 mmu-miR-340-5p miRNA MIMAT0004651 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00386254 mmu-miR-384-5p miRNA MIMAT0004745 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00506600 mmu-miR-694 miRNA MIMAT0003474 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00610985 mmu-miR-92b-3p miRNA MIMAT0004899 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00739926 mmu-miR-29c-3p miRNA MIMAT0000536 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00860062 mmu-miR-134-5p miRNA MIMAT0000146 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00938629 mmu-miR-590-3p miRNA MIMAT0004896 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID00979981 mmu-miR-181d-5p miRNA MIMAT0004324 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID01076383 mmu-miR-181a-5p miRNA MIMAT0000210 N4bp2 mRNA 333789 NGS (Next Generation Sequencing)//Prediction 0.6308 N4bp2 RAID01311859 mmu-miR-181c-5p miRNA MIMAT0000674 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID01902687 mmu-miR-543-3p miRNA MIMAT0003168 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID02265376 mmu-miR-384-3p miRNA MIMAT0001076 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID02442206 mmu-miR-26a-5p miRNA MIMAT0000533 N4bp2 mRNA 333789 NGS (Next Generation Sequencing) 0.5483 N4bp2 RAID02696524 mmu-miR-382-5p miRNA MIMAT0000747 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID02697891 mmu-miR-22-3p miRNA MIMAT0000531 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID03449565 mmu-miR-181b-5p miRNA MIMAT0000673 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID03565593 mmu-miR-6964-3p miRNA MIMAT0027829 N4bp2 mRNA 333789 Prediction 0.1828 N4bp2 RAID03905974 mmu-miR-381-3p miRNA MIMAT0000746 N4bp2 mRNA 333789 Prediction 0.1828