DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Herc1 ATTTA 123-14702 14824-14828;15079-15083 Herc1 WTATTTATW 123-14702 15077-15085 Herc1 WWATTTAWW 123-14702 15077-15085 Herc1 WWTATTTATWW 123-14702 15076-15086 Herc1 WWWATTTAWWW 123-14702 15076-15086 Herc1 WWWTATTTATWWW 123-14702 15075-15087 Herc1 WWWWATTTAWWWW 123-14702 15075-15087

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 235439 Herc1 cguuccGUCAC--CGGA-CAUGUCa :|||| |:|| |||||| aaucuuUAGUGAAGUCUGGUACAGu 2 17 1714 1738 [mm9:9:66324451-66324475:+] 0.5182 123 6 -18.92 -0.1083 MIMAT0004519 mmu-let-7g* 235439 Herc1 cguuccGUCACCGGACAUGUca | || | :|||||| auuuuuCUGU-GAUUGUACAaa 3 17 163 183 [mm9:9:66356294-66356314:+] 0.5522 126 0 -10.99 -0.1231 MIMAT0004521 mmu-miR-15b* 235439 Herc1 aucUC-GUCGUUUAUUACUAAGc || |||:|| |||||||| accAGUCAGUAA--AAUGAUUCa 2 20 692 712 [mm9:9:66323429-66323449:+] 0.5285 159 7 -13.87 -0.8264 MIMAT0004522 mmu-miR-27b* 235439 Herc1 caagugguuagucgaUUCGAGa |||||| aagucaggguaccacAAGCUCc 2 8 395 416 [mm9:9:66298789-66298810:+] 0.7067 120 6 -12.79 -0.1203 MIMAT0004522 mmu-miR-27b* 235439 Herc1 caAGUGGUUAGUCG----AUUCGAGa ||||: || | ||||||| cuUCACUUCUCUUCAUAAUAAGCUCa 2 21 1209 1234 [mm9:9:66297639-66297664:+] 0.5280 143 7 -15.75 -0.4911 MIMAT0004522 mmu-miR-27b* 235439 Herc1 caAGUGGUUAGUCGAUUCGAga |:| || || |||||| uuUUAGGAA-CA--UAAGCUga 3 21 87 105 [mm9:9:66356218-66356236:+] 0.5892 123 0 -7.43 -0.1195 MIMAT0004523 mmu-miR-29b* 235439 Herc1 auUUGG--UGGUAUACUUUG-GUCg |:|| ||| | | |||| ||| cuAGCCUUACCUUUUAAAACACAGa 2 21 769 793 [mm9:9:66297199-66297223:+] 0.5256 123 0 -12.57 -0.7165 MIMAT0004523 mmu-miR-29b* 235439 Herc1 auUUGGUGGUAUACUUUGGUcg ||: ||: |: |||||| guAAUAACUUUG-AAAACCAag 3 21 1251 1271 [mm9:9:66221832-66221852:+] 0.5134 130 0 -8.79 -0.1666 MIMAT0004523 mmu-miR-29b* 235439 Herc1 auuUGGUGGUAUACUUUGGUCg || | :: |||||||||| gacACAAAUGCAUGAAACCAGg 2 20 258 279 [mm9:9:66322995-66323016:+] 0.5355 163 7 -17.99 -0.1388 MIMAT0000129 mmu-miR-30a* 235439 Herc1 cgacgUUUGUAG---GCUG-ACUUUc :|:|||| |||| ||||| aaacaGAGCAUCAAGCGACAUGAAAa 2 18 267 292 [mm9:9:66298661-66298686:+] 0.7209 124 0 -16.20 -0.8342 MIMAT0000129 mmu-miR-30a* 235439 Herc1 cgACGUUUGUAGGC---UGACUUUc ||: ||| |::| ||||||| uuUGUUAACUUUUGGAAACUGAAAu 2 21 3056 3080 [mm9:9:66299486-66299510:+] 0.4983 155 7 -11.97 -0.4176 MIMAT0000129 mmu-miR-30a* 235439 Herc1 cgacGUUUGUAGGCUG-ACUUUc |||::| |: || ||||| uuccCAAGUAGCUUACAUGAAAc 2 19 1640 1662 [mm9:9:66298070-66298092:+] 0.5187 126 0 -8.56 -0.2696 MIMAT0000129 mmu-miR-30a* 235439 Herc1 cgacgUUUGUAG---GCUG-ACUUUc :|:|||| |||| ||||| aaacaGAGCAUCAAGCGACAUGAAAa 2 18 2231 2256 [mm9:9:66298661-66298686:+] 0.7209 124 0 -16.20 -0.2040 MIMAT0004526 mmu-miR-101a* 235439 Herc1 cgUAGUCGUGACACUA-UUGACu ||: |: : || || ||||| uaAUUUGUUUGGUAAUGAACUGa 2 21 86 108 [mm9:9:66296516-66296538:+] 0.5177 120 0 -8.37 -0.6856 MIMAT0004526 mmu-miR-101a* 235439 Herc1 cguAGUCGUGACACUAUUGAcu ||| |:| |||||| uuuUCAUAAUUUAUAUAACUua 3 20 760 781 [mm9:9:66323497-66323518:+] 0.5364 131 0 -5.18 -0.1697 MIMAT0004526 mmu-miR-101a* 235439 Herc1 cguAGUCGUGACACUAUUGACu | | :||| | ||||||| auuUGACUACU-UCAUAACUGu 2 20 1032 1052 [mm9:9:66353762-66353782:+] 0.5007 153 7 -9.80 -0.4244 MIMAT0004527 mmu-miR-124* 235439 Herc1 uaguuCCAGGCGACACUU-GUGc || | ||||||| ||| aaccuGGAACCCUGUGAACCACu 2 18 156 178 [mm9:9:66298550-66298572:+] 0.7209 125 0 -18.56 -0.7353 MIMAT0004527 mmu-miR-124* 235439 Herc1 uaguuccaggcgacACUUGUGc ||||||| aagagaaaaaaucaUGAACACa 2 9 2462 2483 [mm9:9:66298892-66298913:+] 0.6681 140 7 -8.38 -0.9864 MIMAT0004527 mmu-miR-124* 235439 Herc1 uaguuCCAGGCGACACUU-GUGc || | ||||||| ||| aaccuGGAACCCUGUGAACCACu 2 18 2120 2142 [mm9:9:66298550-66298572:+] 0.7209 125 0 -18.56 -0.1129 MIMAT0004527 mmu-miR-124* 235439 Herc1 uaGUUCCAG-GCGACACUUGUGc :||| | | | |||||||: ugUAAGCCCACCCAGUGAACAUg 2 21 294 316 [mm9:9:66356425-66356447:+] 0.6782 139 0 -18.30 -0.1036 MIMAT0000137 mmu-miR-126-5p 235439 Herc1 gcgcAUGGUUUUCAUUAUUAc ||:::| ||||||| gguuUAUUGA---UAAUAAUu 2 18 1017 1034 [mm9:9:66297447-66297464:+] 0.5407 141 7 -2.31 -0.6925 MIMAT0000137 mmu-miR-126-5p 235439 Herc1 gcgcaugguuuucAUUAUUAc ||||||| ucaacccugcuuuUAAUAAUu 2 9 16 36 [mm9:9:66220597-66220617:+] 0.5011 140 7 -4.22 -1.0022 MIMAT0000137 mmu-miR-126-5p 235439 Herc1 gcgcauggUUUUCA-UUAUUAc ||| || |||||| cauuagggAAAUGUAAAUAAUu 2 14 1582 1603 [mm9:9:66324319-66324340:+] 0.4881 121 6 -2.96 -0.3977 MIMAT0004530 mmu-miR-127* 235439 Herc1 uagucucgggagacUCGAAGUc ||||||| ucagaaaaugaaauAGCUUCAu 2 9 420 441 [mm9:9:66298814-66298835:+] 0.6924 140 7 -11.86 -1.1566 MIMAT0004530 mmu-miR-127* 235439 Herc1 uagucucgggagacUCGAAGUc ||||||| ucagaaaaugaaauAGCUUCAu 2 9 2384 2405 [mm9:9:66298814-66298835:+] 0.6924 140 7 -11.86 -0.6512 MIMAT0000143 mmu-miR-9* 235439 Herc1 ugaaagccAAUAGAUCGAAAUa ||||:|||||||| cuuaacauUUAUUUAGCUUUAc 2 15 778 799 [mm9:9:66323515-66323536:+] 0.5360 166 7 -13.00 -0.9765 MIMAT0000143 mmu-miR-9* 235439 Herc1 ugaAAGCCAAUAGA-UC-GAAAUa | :|| |:|:| || ||||| augUGUGGCUGUUUAAGACUUUAu 2 20 1507 1530 [mm9:9:66324244-66324267:+] 0.5822 122 0 -11.70 -0.4532 MIMAT0000143 mmu-miR-9* 235439 Herc1 ugaAAGCCAAUAGAUCG-AAAUa ||| | |||||| |||| ccaUUCAG-GCUCUAGCAUUUAg 2 20 83 104 [mm9:9:66352813-66352834:+] 0.5334 121 0 -12.44 -0.3161 MIMAT0003473 mmu-miR-133a* 235439 Herc1 uaaaccAAGGUAA--AAUGGUCg || :| | ||||||| uucacaUUGUAAUGAUUACCAGu 2 16 675 697 [mm9:9:66323412-66323434:+] 0.5205 142 7 -11.55 -0.5466 MIMAT0000152 mmu-miR-140* 235439 Herc1 ggcaccaagaUGGGACACCAu :||||||||| aguucagaaaGCCCUGUGGUa 2 12 327 347 [mm9:9:66296757-66296777:+] 0.5128 151 7 -23.13 -0.1014 MIMAT0000152 mmu-miR-140* 235439 Herc1 ggcACCAA-GAUG-GGACACCAu || || |:: :||||||| ucuUGCUUAGUGUAUCUGUGGUu 2 19 1706 1728 [mm9:9:66298136-66298158:+] 0.5185 144 7 -15.21 -0.1687 MIMAT0000152 mmu-miR-140* 235439 Herc1 ggcaccAAGAU--GGGACACCAu ||||: |:||||||| acccucUUCUGGUCUCUGUGGUc 2 16 885 907 [mm9:9:66221466-66221488:+] 0.5007 154 7 -20.09 -0.2376 MIMAT0004533 mmu-miR-141* 235439 Herc1 aggUUGUGACGUGA--CCUUCUAc ||| | | ||| ||||||| ugaAAC-CAGGACUUGGGAAGAUg 2 20 270 292 [mm9:9:66323007-66323029:+] 0.5355 152 7 -23.44 -0.1996 MIMAT0004533 mmu-miR-141* 235439 Herc1 aggUUGUGACGU--GACC-UUCUAc :||| |||| | || ||||| acaGACA-UGCAUGCAGGCAAGAUa 2 20 498 521 [mm9:9:66323235-66323258:+] 0.5001 120 0 -14.96 -0.2893 MIMAT0000154 mmu-miR-142-5p 235439 Herc1 ucAUCACGAAAGAUGAAAUAc || | | : ||||||| aaUAAUUAUGAUGACUUUAUu 2 20 1142 1162 [mm9:9:66297572-66297592:+] 0.5280 143 7 -6.58 -0.2095 MIMAT0000154 mmu-miR-142-5p 235439 Herc1 ucAUC-ACGAAAGAUGAAAUAc |:| ||:|| ||||||| ugUGGCUGUUUAAGACUUUAUc 2 20 1510 1531 [mm9:9:66324247-66324268:+] 0.4963 154 7 -12.91 -0.2267 MIMAT0004534 mmu-miR-145* 235439 Herc1 guUCUUGUCAUAAAGGUCCUUa ||:|::||: ||||||| gaAGGAUGGUGGGACCAGGAAu 2 21 1471 1492 [mm9:9:66324208-66324229:+] 0.6681 160 7 -23.81 -0.4508 MIMAT0004535 mmu-miR-150* 235439 Herc1 gauAGGG--GGUC-C--GGAC-AUGGUc |||| |||| | :||| ||||| aguUCCCAUCCAGAGUAUCUGAUACCAg 2 20 1753 1780 [mm9:9:66324490-66324517:+] 0.5148 120 0 -25.49 -0.3299 MIMAT0004537 mmu-miR-154* 235439 Herc1 uuauccaguuggcacAUACUAa |||||| aagaauaagcauauaUAUGAUa 2 8 1202 1223 [mm9:9:66221783-66221804:+] 0.5330 120 6 -5.20 -0.2727 MIMAT0004539 mmu-miR-183* 235439 Herc1 aauaccgggaagccAUUAAGUg ||||||| aaacaguugacauuUAAUUCAu 2 9 3239 3260 [mm9:9:66299669-66299690:+] 0.5013 140 7 -7.31 -0.4096 MIMAT0004539 mmu-miR-183* 235439 Herc1 aauaccgGGAAGCCAUU-AAGUg || || |||| |||| cuuacaaCCAUCUGUAACUUCAg 2 16 846 868 [mm9:9:66221427-66221449:+] 0.5007 123 0 -8.96 -0.2745 MIMAT0000218 mmu-miR-24-1* 235439 Herc1 ugACUAUAGUCGAGUCAUC-CGUg | | || :|: ::|||| ||| auUAAAAUAGGUCUGGUAGUGCAc 2 22 3079 3102 [mm9:9:66299509-66299532:+] 0.5003 121 0 -17.68 -0.1573 MIMAT0000218 mmu-miR-24-1* 235439 Herc1 ugACUAU-AGUCGA---GU-CAUCCGUg ||:|: |||||| || ||||||| caUGGUGCUCAGCUAUACAUGUAGGCAa 2 22 918 945 [mm9:9:66221499-66221526:+] 0.5007 162 7 -25.58 -0.9786 MIMAT0004542 mmu-miR-191* 235439 Herc1 ccCUUGCUUUAGGUUC-ACGUCg ||| | :||||||| ||||| ggGAAAG-GAUCCAAGAUGCAGu 2 21 1156 1177 [mm9:9:66323893-66323914:+] 0.7160 138 0 -27.99 -0.6624 MIMAT0004544 mmu-miR-193* 235439 Herc1 aguagaacgggcgUUUCUGGGu |||||||| aguguauauauaaAAAGACCCu 2 10 3365 3386 [mm9:9:66299795-66299816:+] 0.5269 145 7 -12.50 -0.3404 MIMAT0000234 mmu-miR-201 235439 Herc1 uucUUGUUACGGAAUGAC-UCAu ||:|| ||| |||| ||| ugaAAUAACUCCUCACUGAAGUa 2 20 1532 1554 [mm9:9:66324269-66324291:+] 0.4299 131 0 -15.05 -0.6086 MIMAT0000234 mmu-miR-201 235439 Herc1 uucuuguuACGGAAUGACUCAu || | |||||||| gccuggucUG-CAUACUGAGUa 2 15 2443 2463 [mm9:9:66355173-66355193:+] 0.5006 148 7 -16.42 -0.2981 MIMAT0004547 mmu-miR-203* 235439 Herc1 acAACUUGACAGUUCUUGGUGa | |||| | : ||||||| ccUGGAACCCU-GUGAACCACu 2 21 158 178 [mm9:9:66298552-66298572:+] 0.7209 150 7 -16.71 -0.9032 MIMAT0004547 mmu-miR-203* 235439 Herc1 acAACUUGACAGUUCUUGGUGa | |||| | : ||||||| ccUGGAACCCU-GUGAACCACu 2 21 2122 2142 [mm9:9:66298552-66298572:+] 0.7209 150 7 -16.71 -0.1789 MIMAT0004547 mmu-miR-203* 235439 Herc1 acaaCUUGA-CAGUUCU-UGGUGa | |:| |||||| ||||| uggcGUAUUCCUCAAGAUACCACa 2 19 1426 1449 [mm9:9:66324163-66324186:+] 0.6679 125 0 -14.19 -0.3470 MIMAT0000249 mmu-miR-30e* 235439 Herc1 cgacaUUUGUAG---GCUG-ACUUUc :|:|||| |||| ||||| aaacaGAGCAUCAAGCGACAUGAAAa 2 18 267 292 [mm9:9:66298661-66298686:+] 0.7209 124 0 -15.30 -0.8342 MIMAT0000249 mmu-miR-30e* 235439 Herc1 cgACAUUUGUAGGC---UGACUUUc ||| ||| |::| ||||||| uuUGUUAACUUUUGGAAACUGAAAu 2 21 3056 3080 [mm9:9:66299486-66299510:+] 0.4983 159 7 -13.25 -0.4176 MIMAT0000249 mmu-miR-30e* 235439 Herc1 cgacaUUUGUAG---GCUG-ACUUUc :|:|||| |||| ||||| aaacaGAGCAUCAAGCGACAUGAAAa 2 18 2231 2256 [mm9:9:66298661-66298686:+] 0.7209 124 0 -15.30 -0.2040 MIMAT0000249 mmu-miR-30e* 235439 Herc1 cgACAUUUGUAGGCUG-ACUUUc ||||||: | || ||||| uaUGUAAAU-UAGUACAUGAAAa 2 21 1341 1362 [mm9:9:66297771-66297792:+] 0.5144 122 0 -8.73 -0.5587 MIMAT0000249 mmu-miR-30e* 235439 Herc1 cgacaUUUGUAGGCUG-ACUUUc ||::| |: || ||||| uucccAAGUAGCUUACAUGAAAc 2 18 1640 1662 [mm9:9:66298070-66298092:+] 0.5187 121 0 -5.32 -0.2696 MIMAT0004573 mmu-miR-293* 235439 Herc1 guuuUACAGUGUGUCAA-ACUCa || |:: |:|||| |||| caucAUUUUGAAUAGUUAUGAGa 2 19 814 836 [mm9:9:66297244-66297266:+] 0.5640 126 0 -10.49 -0.6885 MIMAT0004573 mmu-miR-293* 235439 Herc1 guuuuAC-AGUGUGUCAA-ACUCa || |:|:| |||| |||| auuguUGCUUAUAAAGUUAUGAGu 2 18 1513 1536 [mm9:9:66297943-66297966:+] 0.5397 124 0 -11.39 -0.1474 MIMAT0004573 mmu-miR-293* 235439 Herc1 guUUUACAGUGUGUCAAACUCa ||: | |:|||||||| agAAGAGAAUGAUAGUUUGAGa 2 21 1015 1036 [mm9:9:66221596-66221617:+] 0.5200 152 7 -16.05 -1.1349 MIMAT0004573 mmu-miR-293* 235439 Herc1 guuuUACAGUGUGUCAA-ACUCa || || |::||| |||| ucucAUUACAGAUGGUUGUGAGu 2 19 353 375 [mm9:9:66220934-66220956:+] 0.5000 122 0 -12.15 -0.1110 MIMAT0000371 mmu-miR-293 235439 Herc1 uguGAUGUUUGAG---ACGCCGUGa |||||: : | |||||||| gcuCUACAGUUCCUGAUGCGGCACa 2 20 2693 2717 [mm9:9:66299123-66299147:+] 0.7533 154 7 -24.96 -0.3518 MIMAT0004574 mmu-miR-294* 235439 Herc1 ucuaucccggaGGUAAAACUCa || ||||||| gcucccuacacCCUUUUUGAGa 2 12 626 647 [mm9:9:66297056-66297077:+] 0.5008 147 7 -11.55 -0.1289 MIMAT0004574 mmu-miR-294* 235439 Herc1 ucuaucccggAGGUAAAACUCa || ||||||| auaaaucaaaUCAUUUUUGAGa 2 13 3609 3630 [mm9:9:66300039-66300060:+] 0.5008 144 7 -8.88 -0.2260 MIMAT0004575 mmu-miR-295* 235439 Herc1 cuuCACACGGGGUGUAAACUCa || :::: :||||||| auuGUUAUUUUUUUAUUUGAGu 2 20 126 147 [mm9:9:66296556-66296577:+] 0.4746 143 7 -10.83 -0.2930 MIMAT0004575 mmu-miR-295* 235439 Herc1 cuucacacggggUGUAAACUca | |||||| aaccaagaauaaAAAUUUGAau 3 11 1265 1286 [mm9:9:66221846-66221867:+] 0.5134 122 0 -5.57 -0.2980 MIMAT0004575 mmu-miR-295* 235439 Herc1 cuUCACACGGGGUGUA-AACUCa :|||| : ::||| ||||| gaGGUGUUUAAUGCAUAUUGAGu 2 21 1649 1671 [mm9:9:66324386-66324408:+] 0.4966 124 0 -18.49 -0.2265 MIMAT0000376 mmu-miR-298 235439 Herc1 cccuUCUUGUCGGGAGGAGACGg || :|:::|||||||: gcucAGUCAGGUUUUCCUCUGUa 2 20 200 222 [mm9:9:66356331-66356353:+] 0.5522 139 0 -20.44 -0.1670 MIMAT0004578 mmu-miR-300* 235439 Herc1 uguUUCCUAUUGGAGAGAAGUu ::| | ||:|||||||| aguGGGCUUCACUUCUCUUCAu 2 20 1203 1224 [mm9:9:66297633-66297654:+] 0.5280 159 7 -18.13 -0.3588 MIMAT0004579 mmu-miR-302a* 235439 Herc1 cgUUCAU--GUUGGUGCAAAU-UCa |:||| |||| :||||| || aaAGGUAUCCAAC--UGUUUAUAGa 2 21 3267 3289 [mm9:9:66299697-66299719:+] 0.5091 120 0 -11.16 -0.4465 MIMAT0004579 mmu-miR-302a* 235439 Herc1 cguucAUGUUGGUGCAAAUUCa ||::|: | |||||| auauaUAUGAUAAAUUUUAAGa 2 18 1212 1233 [mm9:9:66221793-66221814:+] 0.5330 125 6 -4.50 -0.2534 MIMAT0004579 mmu-miR-302a* 235439 Herc1 cgUUCAUGUUGGUGCAAAUUCa | ||::::| :||||||| uaAUGUGUGGC--UGUUUAAGa 2 21 1505 1524 [mm9:9:66324242-66324261:+] 0.5822 149 7 -12.20 -0.6795 MIMAT0004579 mmu-miR-302a* 235439 Herc1 cguUCAUGUU-GGU-GCAAAUUCa || ||:: :|| ||||||| gacAG-ACGGUUCAGAGUUUAAGa 2 20 337 359 [mm9:9:66323074-66323096:+] 0.4869 143 7 -12.83 -0.2091 MIMAT0004580 mmu-miR-34c* 235439 Herc1 ggaccgacacaccaaUCACUAa |||||| gcagagauuaccaucAGUGAUa 2 8 123 144 [mm9:9:66296323-66296339,66298534-66298538:+] 0.7626 120 6 -6.65 -0.2004 MIMAT0004580 mmu-miR-34c* 235439 Herc1 ggaccGACACACCA----AUCACUAa || | |||| ||||||| cccaaCUUUUUGGUCGCCUAGUGAUa 2 18 2083 2108 [mm9:9:66298513-66298538:+] 0.7209 148 7 -12.00 -0.1961 MIMAT0004580 mmu-miR-34c* 235439 Herc1 ggaccgacacaccaAUCACUAa ||||||| guaauauaauucuaUAGUGAUu 2 9 2895 2916 [mm9:9:66299325-66299346:+] 0.3698 140 7 -8.55 -0.3114 MIMAT0004580 mmu-miR-34c* 235439 Herc1 ggacCGACACACCAAUC-ACUAa || || |||||| |||| gcgaGCAUUGGGGUUAGCUGAUc 2 19 2752 2774 [mm9:9:66299182-66299204:+] 0.7533 130 0 -14.36 -0.1213 MIMAT0004581 mmu-miR-34b-3p 235439 Herc1 cuaccgucaccucaaUCACUAa |||||| gcagagauuaccaucAGUGAUa 2 8 123 144 [mm9:9:66296323-66296339,66298534-66298538:+] 0.7626 120 6 -9.87 -0.1985 MIMAT0004581 mmu-miR-34b-3p 235439 Herc1 cuacCGUCACCUCAAUC-ACUAa ||| |||:||||| |||| gcgaGCAUUGGGGUUAGCUGAUc 2 19 2752 2774 [mm9:9:66299182-66299204:+] 0.7533 142 0 -20.93 -0.1189 MIMAT0004581 mmu-miR-34b-3p 235439 Herc1 cuaccgucaccucaAUCACUAa ||||||| acuuuuuggucgccUAGUGAUa 2 9 2087 2108 [mm9:9:66298517-66298538:+] 0.7209 140 7 -9.33 -0.1979 MIMAT0004581 mmu-miR-34b-3p 235439 Herc1 cuaccgucaccucaAUCACUAa ||||||| guaauauaauucuaUAGUGAUu 2 9 2895 2916 [mm9:9:66299325-66299346:+] 0.3698 140 7 -8.48 -0.3088 MIMAT0004583 mmu-miR-130b* 235439 Herc1 ucaucacGUUGUC--CCUUUCUCa :||||| |||||||| caucaaaUAACAGAAGGAAAGAGa 2 16 2444 2467 [mm9:9:66298874-66298897:+] 0.6681 158 7 -18.57 -0.7659 MIMAT0004583 mmu-miR-130b* 235439 Herc1 ucaUC-ACGUUGU-CCCUU-UCUCa || ||:|||| ||| |||| cugAGUUGUAACAUUUGAACAGAGa 2 20 1077 1101 [mm9:9:66221658-66221682:+] 0.5330 121 0 -13.88 -0.5916 MIMAT0005438 mmu-miR-30c-2* 235439 Herc1 ucuCAUUUGUCG-GAAGA-GGGUc || |||| :|||| |||| gauGUCCUCAGCUUUUCUGCCCAu 2 20 1555 1578 [mm9:9:66354285-66354308:+] 0.5240 122 0 -16.73 -0.3013 MIMAT0004617 mmu-miR-148a* 235439 Herc1 ucagccucacagAGUCUUGAAa | ||||||| aaaguuaaauagUGAGAACUUa 2 11 3194 3215 [mm9:9:66299624-66299645:+] 0.5014 142 7 -11.10 -0.3529 MIMAT0004620 mmu-let-7a* 235439 Herc1 ccUUUCUGUCAUCUAACAUAUc || ||:: || ||||||| guAAUGAUGUCAGUUUGUAUAa 2 21 1942 1963 [mm9:9:66298372-66298393:+] 0.4881 160 7 -8.35 -0.4516 MIMAT0004621 mmu-let-7b* 235439 Herc1 cccUUCCGUCA-UCCAACAUAUc || | || || ||||||| uguAAUGAUGUCAGUUUGUAUAa 2 20 1941 1963 [mm9:9:66298371-66298393:+] 0.4881 154 7 -8.62 -0.4450 MIMAT0004621 mmu-let-7b* 235439 Herc1 ccCUUCCGUCA--UCCAACAU-AUc | || :||| | |||||| || uaGUAGUUAGUGAAAGUUGUACUAa 2 21 1107 1131 [mm9:9:66297537-66297561:+] 0.5280 123 0 -9.95 -0.6621 MIMAT0004621 mmu-let-7b* 235439 Herc1 cccUUCCGUCAUCCA-ACAUAUc || |: ||: || |||||| uuaAAUGU-GUGUGUGUGUAUAu 2 20 876 897 [mm9:9:66297306-66297327:+] 0.5132 121 6 -6.39 -0.4139 MIMAT0004622 mmu-let-7c-1* 235439 Herc1 ccuUUCGAUCUUCCAACAUGUc :| | ||| ||||||| aguGAACAUGAA-AUUGUACAu 2 20 307 327 [mm9:9:66356438-66356458:+] 0.7157 145 7 -7.21 -1.2137 MIMAT0004622 mmu-let-7c-1* 235439 Herc1 ccuuucgaucuuCCAACAUGUc | ||||||| uuauuuuucuguGAUUGUACAa 2 11 161 182 [mm9:9:66356292-66356313:+] 0.5522 142 7 -8.05 -1.1408 MIMAT0005439 mmu-let-7c-2* 235439 Herc1 ccUUUCUGUCAUCUAACAUAUc || ||:: || ||||||| guAAUGAUGUCAGUUUGUAUAa 2 21 1942 1963 [mm9:9:66298372-66298393:+] 0.4881 160 7 -8.35 -0.4516 MIMAT0004623 mmu-let-7f* 235439 Herc1 cccUUCCGUUA-UCUAACAUAUc || | :| || ||||||| uguAAUGAUGUCAGUUUGUAUAa 2 20 1941 1963 [mm9:9:66298371-66298393:+] 0.4881 150 7 -6.40 -0.4483 MIMAT0004625 mmu-miR-16* 235439 Herc1 agucgucGUG-UCAGUUAUGACc :|| | | ||||||| agacauuUACUAUUAAAUACUGu 2 16 1785 1807 [mm9:9:66354515-66354537:+] 0.5006 146 7 -9.14 -0.2172 MIMAT0004626 mmu-miR-18a* 235439 Herc1 guCUUCCUCG---UGAAUCCC-GUCa |||||||: | |||||| ||| agGAAGGAGUUCAAGUUAGGGCCAGc 2 21 1846 1871 [mm9:9:66354576-66354601:+] 0.5007 135 0 -25.80 -0.2131 MIMAT0004628 mmu-miR-21* 235439 Herc1 cugucgggUAGCUGACGACAAc | | ||||||||| acccugugAACCACUGCUGUUu 2 15 164 185 [mm9:9:66298558-66298579:+] 0.7209 154 7 -18.51 -0.5221 MIMAT0004628 mmu-miR-21* 235439 Herc1 cugUCGGGUAGCUGACGACAAc ||:: | | ||||||| gagAGUUAAAGGCAUGCUGUUu 2 20 1033 1054 [mm9:9:66221614-66221635:+] 0.5330 147 7 -16.62 -0.7012 MIMAT0005440 mmu-miR-24-2* 235439 Herc1 ugacaaAGUCGA---GU-CAUCCGUg |||||| || ||||||| uggugcUCAGCUAUACAUGUAGGCAa 2 17 920 945 [mm9:9:66221501-66221526:+] 0.5007 154 7 -21.51 -0.9786 MIMAT0004630 mmu-miR-26b* 235439 Herc1 cuCGGUUCAUUACCUC-UUGUCc |:::|||:|| || ||||| ggGUUGAGUGAU--AGCAACAGa 2 21 1749 1769 [mm9:9:66298179-66298199:+] 0.5441 125 0 -15.65 -0.1631 MIMAT0004630 mmu-miR-26b* 235439 Herc1 cuCGGUUCAUUACCUCUUGUCc |:: | ||: ||:|||| uuGUUCAUUAG-AAAGGACAGu 2 21 337 357 [mm9:9:66356468-66356488:+] 0.7525 126 0 -9.49 -0.1044 MIMAT0004631 mmu-miR-29a* 235439 Herc1 gaCUUGUGGUUUUC----UUUAGUCa |:::|||| ||| ||||||| caGGGUACCACAAGCUCCAAAUCAGa 2 21 399 424 [mm9:9:66298793-66298818:+] 0.7067 159 7 -19.16 -1.0531 MIMAT0004631 mmu-miR-29a* 235439 Herc1 gaCUUGUGGUUUUC----UUUAGUCa |:::|||| ||| ||||||| caGGGUACCACAAGCUCCAAAUCAGa 2 21 2363 2388 [mm9:9:66298793-66298818:+] 0.7067 159 7 -19.16 -0.3499 MIMAT0004631 mmu-miR-29a* 235439 Herc1 gacUUGUGGUUUUCUUUAGUCa |:| | : ||||||||| cauAGCUCAGUCAGAAAUCAGa 2 20 2500 2521 [mm9:9:66298930-66298951:+] 0.7634 155 7 -15.92 -0.1789 MIMAT0004631 mmu-miR-29a* 235439 Herc1 gacUUGUGGUUUUCUUUA-GUCa || | |::|| |||| ||| auuAAAAGCGGAA-AAAUACAGu 2 20 551 572 [mm9:9:66323288-66323309:+] 0.4981 121 0 -8.45 -0.9015 MIMAT0004632 mmu-miR-29c* 235439 Herc1 cuUGUGGUCCUCUUUA-GCCAGu | :| || || || ||||| ugAAGCGAGCAGUCAUGCGGUCa 2 21 2721 2743 [mm9:9:66299151-66299173:+] 0.7533 120 0 -17.07 -0.1848 MIMAT0004633 mmu-miR-27a* 235439 Herc1 acgaGUGUUCGUCGAUUCGGGa :||| : ||||||| augaUACAUUUUUGUAAGCCCa 2 19 282 303 [mm9:9:66356413-66356434:+] 0.6408 142 7 -13.98 -1.0570 MIMAT0004635 mmu-miR-92a* 235439 Herc1 cauuacggUGGUUAGGGGUGGa ||:| ||||||| aucacuaaACUAUGCCCCACCu 2 15 222 243 [mm9:9:66296652-66296673:+] 0.5068 150 7 -23.94 -0.1979 MIMAT0004635 mmu-miR-92a* 235439 Herc1 cauuacggugguuagGGGUGGa |||||| auacauuuuuguaagCCCACCc 2 8 285 306 [mm9:9:66356416-66356437:+] 0.6408 120 6 -14.95 -0.1902 MIMAT0004636 mmu-miR-93* 235439 Herc1 gcccuucacgAUCGAGUC-GUCa |||||||| ||| acccaugacaUAGCUCAGUCAGa 2 13 2492 2514 [mm9:9:66298922-66298944:+] 0.7634 124 0 -17.93 -0.5883 MIMAT0004636 mmu-miR-93* 235439 Herc1 gcccUUCACGAUCGAGUCGUCa :|| |:||||||||| acuaGAGAAAUGGCUCAGCAGu 2 19 766 787 [mm9:9:66221347-66221368:+] 0.5053 158 7 -22.85 -0.2666 MIMAT0004636 mmu-miR-93* 235439 Herc1 gcccuucACGAUCGAGUCGUCa | :| |||||||| cuccuccUCUUUACUCAGCAGu 2 16 779 800 [mm9:9:66353509-66353530:+] 0.5135 147 7 -16.67 -0.1018 MIMAT0000544 mmu-miR-129-3p 235439 Herc1 uaCGAAAAACCCCAUUC-CCGAa | ||||| |||| |||| guGAUUUUUCUCUUAAGUGGCUg 2 21 1381 1403 [mm9:9:66324118-66324140:+] 0.6678 124 0 -10.19 -0.8930 MIMAT0000551 mmu-miR-323-3p 235439 Herc1 ucuccAGCUGGCACAUUACAc |:| | | ||||||| ucaaaUUGUCAG-GUAAUGUg 2 17 1492 1511 [mm9:9:66324229-66324248:+] 0.5822 146 7 -14.24 -0.1892 MIMAT0000558 mmu-miR-325* 235439 Herc1 ugUGAAUGACUCGUGGAUG-AUCc |||| : :|:| |||| ||| auACUUUUAUGGUAACUACAUAGa 2 22 61 84 [mm9:9:66356192-66356215:+] 0.5767 125 0 -14.57 -1.0458 MIMAT0004640 mmu-miR-325 235439 Herc1 aacuauccuccACGAGUUAUUu | |||||||| gucacccaccuUUCUCAAUAAu 2 12 15 36 [mm9:9:66356146-66356167:+] 0.4660 147 7 -8.25 -0.2603 MIMAT0000569 mmu-miR-330* 235439 Herc1 agagACGUCCGGGAC--ACGAAACg ||:| |: || ||||||| uuagUGUA-UCUGUGGUUGCUUUGg 2 20 1712 1735 [mm9:9:66298142-66298165:+] 0.5516 144 7 -16.56 -0.1206 MIMAT0000569 mmu-miR-330* 235439 Herc1 agagacguccGGGACACGAAACg :::||||||||| uuaaauauuuUUUUGUGCUUUGu 2 14 86 108 [mm9:9:66220667-66220689:+] 0.5213 153 7 -15.98 -0.2311 MIMAT0000569 mmu-miR-330* 235439 Herc1 agagacguccGGGACACGAAAcg ||| |||||| agauagucaaCCC--UGCUUUua 3 14 10 30 [mm9:9:66220591-66220611:+] 0.4258 122 0 -9.93 -0.1272 MIMAT0004643 mmu-miR-331-5p 235439 Herc1 ccuaGGGACCCUGGUAU-GGAUc ||:| |:|||| |||| cuugCCUUUUAAUCAUAUCCUAu 2 19 248 270 [mm9:9:66296678-66296700:+] 0.5128 122 0 -14.03 -0.2306 MIMAT0004647 mmu-miR-338-5p 235439 Herc1 gugAGUCGUGGUCC--UAUAACAa |||| : :| | ||||||| auaUCAGGGAUAUGUAAUAUUGUu 2 20 1495 1518 [mm9:9:66297925-66297948:+] 0.5552 150 7 -14.92 -0.2763 MIMAT0000593 mmu-miR-344 235439 Herc1 ugucaguccGAAA--CCGAUCUAGu |||| | ||||||| gcugugccuCUUUCCGUCUAGAUCu 2 15 481 505 [mm9:9:66353211-66353235:+] 0.5527 149 7 -11.37 -0.2235 MIMAT0000595 mmu-miR-345-5p 235439 Herc1 uucgugaccugaucCCCAGUCg ||||||| guuguuagcaggguGGGUCAGa 2 9 2283 2304 [mm9:9:66355013-66355034:+] 0.5108 140 7 -20.09 -0.2522 MIMAT0004656 mmu-miR-345-3p 235439 Herc1 cagaggUCUGGGGAUCAAGUCc |||::: ||||||| uugaugAGAUUUAAAGUUCAGa 2 17 313 334 [mm9:9:66296743-66296764:+] 0.5128 152 7 -15.38 -0.5685 MIMAT0000605 mmu-miR-350 235439 Herc1 cuuucaCAUACCCG----AAACACUu ||||| | ||||||| cacuugGUAUGUUCUCCUUUUGUGAu 2 17 1360 1385 [mm9:9:66324097-66324122:+] 0.4176 143 7 -12.30 -0.3572 MIMAT0004659 mmu-miR-10a* 235439 Herc1 auaaggggaUCUAUGCUUAAAc | || :|||||| caagaauaaAAAUUUGAAUUUu 2 14 1268 1289 [mm9:9:66221849-66221870:+] 0.5134 133 6 -5.93 -0.3374 MIMAT0004659 mmu-miR-10a* 235439 Herc1 auaaggggaucuaugCUUAAAc |||||| uaugauaaauuuuaaGAAUUUa 2 8 1217 1238 [mm9:9:66221798-66221819:+] 0.5330 120 6 -3.16 -0.1361 MIMAT0004660 mmu-miR-19a* 235439 Herc1 caUCACGUUGAUA-CGUUUUGAu |||| ::: || ||||||| gaAGUG-GGUGAUAACAAAACUu 2 21 1401 1422 [mm9:9:66297831-66297852:+] 0.5552 149 7 -11.90 -0.2152 MIMAT0004660 mmu-miR-19a* 235439 Herc1 caUCACGUUGAUACGU-UUUGAu ||| || || || ||||| uuAGUAGUACCAUCCAUAAACUa 2 21 903 925 [mm9:9:66323640-66323662:+] 0.4917 124 0 -10.24 -0.5522 MIMAT0004664 mmu-miR-214* 235439 Herc1 cguGUCGUUCACAUCUGUCCGu :| || | | ||||||| accUAACAUAUCU-GACAGGCa 2 20 229 249 [mm9:9:66298623-66298643:+] 0.7209 145 7 -16.91 -1.2240 MIMAT0004664 mmu-miR-214* 235439 Herc1 cguGUCGUUCACAUCUGUCCGu :| || | | ||||||| accUAACAUAUCU-GACAGGCa 2 20 2193 2213 [mm9:9:66298623-66298643:+] 0.7209 145 7 -16.91 -0.6674 MIMAT0004666 mmu-miR-33* 235439 Herc1 cacuACGUGACACCUUUGUAAc | :|| || ||||||| ccauUUUACAGU-UAAACAUUu 2 19 271 291 [mm9:9:66296701-66296721:+] 0.5128 148 7 -5.00 -0.3995 MIMAT0004666 mmu-miR-33* 235439 Herc1 cacuacgugacaccUUUGUAAc ||||||| auuuaaaucuacauAAACAUUa 2 9 3031 3052 [mm9:9:66299461-66299482:+] 0.4953 140 7 -3.87 -0.7012 MIMAT0004666 mmu-miR-33* 235439 Herc1 cacuacgugacaccuUUGUAAc |||||| uaauuuauauaacuuAACAUUu 2 8 766 787 [mm9:9:66323503-66323524:+] 0.5360 120 6 -3.23 -0.1123 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaccgucUGACACUAAACAAc |: |||||||||| auaauucuAUAGUGAUUUGUUa 2 15 2900 2921 [mm9:9:66299330-66299351:+] 0.4177 158 7 -11.85 -0.3031 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaccgUCUGACACUAAACAAc || :| | ||||||| aacuuaAGUUUUUAAUUUGUUu 2 17 74 95 [mm9:9:66296504-66296525:+] 0.5177 152 7 -4.11 -0.3701 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaccgUCUGACACUAAACAAc ||::| | ||||||| aaagugAGGUUCU-AUUUGUUa 2 17 3439 3459 [mm9:9:66299869-66299889:+] 0.5269 150 7 -7.07 -0.5087 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaccgUCUGACACUAAACAAc ||| | ||||||| guuaugAGAAUUACAUUUGUUu 2 17 828 849 [mm9:9:66297258-66297279:+] 0.5640 148 7 -7.03 -0.3070 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaccgUCUGACACUAAACAAc | |:| ||||||| acauaaACAUUAGAAUUUGUUa 2 17 3041 3062 [mm9:9:66299471-66299492:+] 0.4983 144 7 -4.61 -0.6965 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaCCGUCUGACACUA-AACAAc || | | ||| || ||||| ucaGGGAUA-UGUAAUAUUGUUg 2 20 1498 1519 [mm9:9:66297928-66297949:+] 0.5552 121 0 -12.81 -0.2618 MIMAT0004670 mmu-miR-7a* 235439 Herc1 auaccgucugacacuAAACAAc |||||| uauucauauauuuauUUUGUUu 2 8 368 389 [mm9:9:66356499-66356520:+] 0.6694 120 6 -1.70 -0.2754 MIMAT0003387 mmu-miR-376a* 235439 Herc1 ugaguaucuuccucUUAGAUGg ||||||| uaauuuucuauuuaAAUCUACa 2 9 3022 3043 [mm9:9:66299452-66299473:+] 0.4953 140 7 -8.11 -0.9190 MIMAT0000742 mmu-miR-378* 235439 Herc1 uguguccuggaccucAGUCCUc |||||| agaaauaaagcagauUCAGGAa 2 8 425 446 [mm9:9:66356556-66356577:+] 0.5863 120 6 -11.04 -0.1044 MIMAT0000745 mmu-miR-380-3p 235439 Herc1 uucUACACCUGGUAUGAUGUAu || ||:| |||||||| guuAUAAAGAUC-UACUACAUa 2 20 1592 1612 [mm9:9:66298022-66298042:+] 0.5297 153 7 -16.07 -0.6661 MIMAT0000745 mmu-miR-380-3p 235439 Herc1 uucuACACCUGGUAUGAUGUAu | ||| :| ||||||| cuuuUAUGG--UA-ACUACAUa 2 19 64 82 [mm9:9:66356195-66356213:+] 0.5767 141 7 -11.87 -1.1134 MIMAT0004691 mmu-miR-382* 235439 Herc1 uuuuucacaACAGGCACUUAcu || |||||| gcagaaaccUGAGAGUGAAUcc 3 14 332 353 [mm9:9:66298726-66298747:+] 0.7209 121 0 -10.58 -0.1176 MIMAT0004704 mmu-miR-335-3p 235439 Herc1 ccAGUCCUCGUUAUUACUUUUu ||| |||:| ||||||| caUCA--AGCGA-CAUGAAAAg 2 21 275 293 [mm9:9:66298669-66298687:+] 0.7209 151 7 -12.15 -0.4250 MIMAT0004704 mmu-miR-335-3p 235439 Herc1 ccAGUCCUCGU-UAUUACUUUuu || | || | ||||||| gcUCCAAAUCAGAAAAUGAAAua 3 21 412 434 [mm9:9:66298806-66298828:+] 0.6924 131 0 -6.21 -0.1313 MIMAT0004704 mmu-miR-335-3p 235439 Herc1 ccaguccUCGUUAU-UACUUUUu | :|:|| ||||||| uauguaaAUUAGUACAUGAAAAa 2 16 1341 1363 [mm9:9:66297771-66297793:+] 0.5144 150 7 -8.14 -0.3100 MIMAT0004704 mmu-miR-335-3p 235439 Herc1 ccaguccucguuaUUACUUUuu ||||||| uuuaguuacuucaAAUGAAAca 3 10 123 144 [mm9:9:66356254-66356275:+] 0.5892 125 0 -4.46 -0.1909 MIMAT0004746 mmu-miR-409-5p 235439 Herc1 uaCGUUUCAACGAGCCCAUUGGa |:| | || :| ||||||: ugGUAUACUU-UUAUGGUAACUa 2 22 57 78 [mm9:9:66356188-66356209:+] 0.5641 135 0 -8.21 -0.1909 MIMAT0001090 mmu-miR-409-3p 235439 Herc1 uccccaaguggcucGUUGUAAg ||||||| guauaaauuauucuCAACAUUg 2 9 1958 1979 [mm9:9:66298388-66298409:+] 0.5299 140 7 -6.99 -0.3148 MIMAT0001090 mmu-miR-409-3p 235439 Herc1 uccccaaguggcucGUUGUAAg :|||||| uaauuuauauaacuUAACAUUu 2 9 766 787 [mm9:9:66323503-66323524:+] 0.5360 124 6 -6.47 -0.1079 MIMAT0003388 mmu-miR-376b* 235439 Herc1 auUGGUAUCUUCCUUAU-AGGUg ||||| || :||| |||| uuACCAU--CAGUGAUACUCCAu 2 21 130 150 [mm9:9:66296330-66296339,66298534-66298544:+] 0.7626 121 0 -12.78 -1.2428 MIMAT0003388 mmu-miR-376b* 235439 Herc1 auUGGUAUCUUCCUUAUAGGUg |:||| ||| ||||||| aaAUCAU-GAACACAUAUCCAa 2 21 2470 2490 [mm9:9:66298900-66298920:+] 0.7634 158 7 -15.43 -0.6564 MIMAT0001093 mmu-miR-411* 235439 Herc1 ccAAUC--ACCUGGCACAAUGUAu |||| |||| || |||||| caUUAGAAAGGACAGUUUUACAUg 2 21 342 365 [mm9:9:66356473-66356496:+] 0.7525 139 6 -16.24 -0.2190 MIMAT0001094 mmu-miR-412 235439 Herc1 gccgaucaccuGGUCCACUu :||||||| agaucauaauuUCAGGUGAg 2 10 980 999 [mm9:9:66221561-66221580:+] 0.4979 141 7 -13.93 -0.8679 MIMAT0001421 mmu-miR-434-5p 235439 Herc1 accaaguuUGGUACUCAG-CUCg ::|||||||| ||| gaaacaccGUCAUGAGUCUGAGg 2 15 293 315 [mm9:9:66298687-66298709:+] 0.7209 126 0 -19.49 -0.9347 MIMAT0001421 mmu-miR-434-5p 235439 Herc1 accaaguuUGGUACUCAG-CUCg ::|||||||| ||| gaaacaccGUCAUGAGUCUGAGg 2 15 2257 2279 [mm9:9:66298687-66298709:+] 0.7209 126 0 -19.49 -0.2664 MIMAT0004758 mmu-miR-463 235439 Herc1 gauggaaUAUACCA-CAGAUAGu |||| | ||||||| aacacagAUAUUCUAGUCUAUCa 2 16 786 808 [mm9:9:66297216-66297238:+] 0.5256 150 7 -13.00 -0.6884 MIMAT0002105 mmu-miR-464 235439 Herc1 auAGAGUGUCUUAUUUGAACCAu |:|:| | | ||||||| auUUUUAGAUUUUUCACUUGGUa 2 22 1346 1368 [mm9:9:66324083-66324105:+] 0.2926 149 7 -14.36 -0.2973 MIMAT0004759 mmu-miR-466a-5p 235439 Herc1 auaCAUGUACAUGUGUGU-GUAu || :|| |::|||| ||| cuaGUCUAUCAAUGCACAUCAUu 2 20 798 820 [mm9:9:66297228-66297250:+] 0.5448 123 0 -10.21 -0.3026 MIMAT0004759 mmu-miR-466a-5p 235439 Herc1 auacauguacaUGUGUGUGUAu || ||||||| uguggggggaaACUCACACAUa 2 12 106 127 [mm9:9:66220687-66220708:+] 0.5289 147 7 -15.45 -0.5816 MIMAT0004759 mmu-miR-466a-5p 235439 Herc1 auaCAUGUACAUGUGUGUGUAu | |: || | :||||||| uuaGAAUCUG-AAGCACACAUu 2 20 425 445 [mm9:9:66353155-66353175:+] 0.5527 149 7 -11.37 -0.2134 MIMAT0002107 mmu-miR-466a-3p 235439 Herc1 agaaUACACACGCACAUACAUAu :| | ||| ||||||| gucaGUAUCUGCUAAUAUGUAUg 2 20 1305 1327 [mm9:9:66297735-66297757:+] 0.5250 151 7 -9.25 -0.1637 MIMAT0002108 mmu-miR-467a-1* 235439 Herc1 cacAUCCACACACAUACAUAUa || | | | ||||||| uacUAAUUUUAU-AAUGUAUAa 2 20 1288 1308 [mm9:9:66324025-66324045:+] 0.4936 141 7 -5.13 -0.9317 MIMAT0002108 mmu-miR-467a-1* 235439 Herc1 cacauccacacacAUACAUAUa |:|||||| ugaaauuguacauUGUGUAUAa 2 10 315 336 [mm9:9:66356446-66356467:+] 0.7341 129 6 -7.45 -0.2465 MIMAT0002110 mmu-miR-469 235439 Herc1 ccuGUGGUUCUAGUUACUUUC-UCCGu ::|:::|| :::| |||| |||| cgcUGCUGGGAGUGGUCAAAGAAGGCa 2 24 67 93 [mm9:9:66296267-66296293:+] 0.8042 131 0 -18.50 -0.5112 MIMAT0002110 mmu-miR-469 235439 Herc1 ccugugguucUAGUUACUUUCUCCGu | || | |||||||| uuuuaauuccAGCACU-AAAGAGGCa 2 17 3105 3129 [mm9:9:66299535-66299559:+] 0.5023 150 7 -17.31 -0.1355 MIMAT0002111 mmu-miR-470 235439 Herc1 ugaguggucacggucaGGUUCUu |||||| guaauaacuuugaaaaCCAAGAa 2 8 1251 1273 [mm9:9:66221832-66221854:+] 0.5134 120 6 -13.25 -0.3048 MIMAT0002111 mmu-miR-470 235439 Herc1 ugaguGGUCACGGUC--AGGUUCUu |||| | || ||||||| gccuuCCAGGGAAAGGAUCCAAGAu 2 19 1148 1172 [mm9:9:66323885-66323909:+] 0.7160 153 7 -19.52 -0.3250 MIMAT0002889 mmu-miR-532-5p 235439 Herc1 ugCCAGGA-UGU---GAGU-UCCGUAc || ||| ||| || | |||||| cuGGACCUAACAUAUCUGACAGGCAUu 2 21 225 251 [mm9:9:66298619-66298645:+] 0.7209 122 6 -18.12 -0.9823 MIMAT0002889 mmu-miR-532-5p 235439 Herc1 ugCCAGGA-UGU---GAGU-UCCGUAc || ||| ||| || | |||||| cuGGACCUAACAUAUCUGACAGGCAUu 2 21 2189 2215 [mm9:9:66298619-66298645:+] 0.7209 122 6 -18.12 -0.3039 MIMAT0002889 mmu-miR-532-5p 235439 Herc1 ugcCAGGAUGU-GAGUUCCGUAc ||:: | | :| ||||||| auaGUUUGAGAGUUAAAGGCAUg 2 20 1026 1048 [mm9:9:66221607-66221629:+] 0.5330 150 7 -15.39 -0.6264 MIMAT0002889 mmu-miR-532-5p 235439 Herc1 ugccAGGAUGU-GAGUUCC-GUAc |||||:| || |||| ||| uuacUCCUAUACCUGAAGGCCAUg 2 19 1556 1579 [mm9:9:66324293-66324316:+] 0.4258 133 0 -22.11 -0.4452 MIMAT0004782 mmu-miR-483 235439 Herc1 gaGGGAAGAGAAGAGGGCAGAa |: | | :| ||||||||| uuCUGUACCUUCCUCCCGUCUu 2 21 2014 2035 [mm9:9:66298444-66298465:+] 0.7209 160 7 -26.45 -0.4807 MIMAT0003120 mmu-miR-483* 235439 Herc1 uucugcccuccccUCCUCACu ||||||| agaagagugaaauAGGAGUGc 2 9 145 165 [mm9:9:66322882-66322902:+] 0.5068 140 7 -14.95 -0.1754 MIMAT0003129 mmu-miR-485* 235439 Herc1 cucuccUCUCGGCACAUACUGa | || | ||||||| uaccacACAGACCAGUAUGACu 2 17 1443 1464 [mm9:9:66324180-66324201:+] 0.6681 148 7 -14.39 -0.4627 MIMAT0003129 mmu-miR-485* 235439 Herc1 cucuccucUCGGCA-CAUACUGa :|| | ||||||| uauuacuuGGCAAUAGUAUGACu 2 15 1238 1260 [mm9:9:66323975-66323997:+] 0.4457 141 7 -12.42 -0.6536 MIMAT0004786 mmu-miR-540-5p 235439 Herc1 ugucucagucuccCACUGGGAAc | ||||||| cccuccuaaugcuGCGACCCUUu 2 11 970 992 [mm9:9:66353700-66353722:+] 0.4939 142 7 -10.50 -0.2045 MIMAT0003170 mmu-miR-541 235439 Herc1 ucACACUGGUUGUAGU--CUUAGGGAa ||| ::| ::| | |||||||| uuUGUUGUCUGUAGAAGUGAAUCCCUa 2 24 1147 1173 [mm9:9:66221728-66221754:+] 0.5330 154 7 -14.80 -0.7904 MIMAT0003173 mmu-miR-547 235439 Herc1 gaguGAGUUUCUACAU-GGUUc :||||| | ||| |||| auucUUCAAA-AGGUAUCCAAc 2 18 3259 3279 [mm9:9:66299689-66299709:+] 0.5091 123 0 -11.87 -0.2454 MIMAT0005295 mmu-miR-376c* 235439 Herc1 auUUGUAUCUUCCUUAUAGGUg | ||| ||| ||||||| aaAUCAU-GAACACAUAUCCAa 2 21 2470 2490 [mm9:9:66298900-66298920:+] 0.7634 154 7 -11.60 -0.6564 MIMAT0003186 mmu-miR-369-3p 235439 Herc1 uuUCUAGUUGGUAC-AUAAUAa | ||:|| :||| |||||| auAUAUUAA-UAUGAUAUUAUc 2 20 1069 1089 [mm9:9:66297499-66297519:+] 0.5343 129 6 -7.04 -0.5427 MIMAT0003186 mmu-miR-369-3p 235439 Herc1 uuucUAGUUGGUACAUA-AUAa || :|| :||||| ||| uuucAUAGACAGUGUAUAUAUa 2 18 3355 3376 [mm9:9:66299785-66299806:+] 0.5269 125 0 -5.24 -0.2762 MIMAT0003186 mmu-miR-369-3p 235439 Herc1 uuucUAGUUGGUACAUAAUAa || :|| ||||||| uacuAUAUUUCAAGUAUUAUu 2 18 647 667 [mm9:9:66221228-66221248:+] 0.5081 149 7 -8.18 -0.8523 MIMAT0003186 mmu-miR-369-3p 235439 Herc1 uuucuAGUUGGUACAUAAUAa |:| ::|| |||||| uuuauUUAUUUAUUUAUUAUa 2 17 287 307 [mm9:9:66220868-66220888:+] 0.4815 128 6 -3.20 -0.2071 MIMAT0003186 mmu-miR-369-3p 235439 Herc1 uuucuaguugguacAUAAUAa |||||| uucauaaccuugaaUAUUAUa 2 8 1178 1198 [mm9:9:66221759-66221779:+] 0.5330 120 6 -7.70 -0.1592 MIMAT0003190 mmu-miR-291b-3p 235439 Herc1 uguuuGUUUUACCUACGUGAAa || |:| ||||||||| accccCACAGU-GAUGCACUUu 2 18 2140 2160 [mm9:9:66354870-66354890:+] 0.5007 159 7 -16.34 -0.1431 MIMAT0003373 mmu-miR-302b* 235439 Herc1 ucuuucgUAAGGGUACAAUUUCa :||: : ||||||| aaugauaGUUUGAGAGUUAAAGg 2 17 1022 1044 [mm9:9:66221603-66221625:+] 0.5200 144 7 -7.10 -0.3570 MIMAT0003373 mmu-miR-302b* 235439 Herc1 ucuuucgUAAGGGUACAAUUUCa | | ::|| |||||| aaccuugAAUAUUAUAUUAAAGa 2 17 1183 1205 [mm9:9:66221764-66221786:+] 0.5330 124 6 -5.28 -0.3281 MIMAT0003375 mmu-miR-302c* 235439 Herc1 cguCCAUUGGGGU-ACAAUUUCg | ||:::: | ||||||| aauGAUAGUUUGAGAGUUAAAGg 2 20 1022 1044 [mm9:9:66221603-66221625:+] 0.5200 146 7 -8.80 -0.3599 MIMAT0003375 mmu-miR-302c* 235439 Herc1 cguccaUUGGGGUACAAUUUCg ||: ::|| |||||| accuugAAUAUUAUAUUAAAGa 2 17 1184 1205 [mm9:9:66221765-66221786:+] 0.5330 128 6 -7.02 -0.3281 MIMAT0003376 mmu-miR-302c 235439 Herc1 ggugAC-UUUGUACCUUCGUGAa || |||||| ||||||| aauaUGUAAACAU-AAAGCACUc 2 19 579 600 [mm9:9:66323316-66323337:+] 0.5208 159 7 -14.80 -0.4163 MIMAT0005460 mmu-miR-1224 235439 Herc1 gaGGUGGAGGGGUC-AGGAGUg :||| | :|:|| |||||| caUCACAUGUCUAGUUCCUCAu 2 20 1900 1921 [mm9:9:66298330-66298351:+] 0.5446 131 6 -22.55 -0.3710 MIMAT0005460 mmu-miR-1224 235439 Herc1 gaGGUGGAGGGGU--CAGGAGUg :| |:|||::: ||||||| cuUCCCUUCCUUGAUGUCCUCAg 2 20 1543 1565 [mm9:9:66354273-66354295:+] 0.5366 154 7 -27.38 -0.2221 MIMAT0003732 mmu-miR-668 235439 Herc1 ccaUCA-CCCGGCUCGGCUCACUGu ||| ||: ||: ||||||| ugaAGUCUGGUACAGUGGAGUGACa 2 22 1723 1747 [mm9:9:66324460-66324484:+] 0.5158 156 7 -22.86 -0.2872 MIMAT0003734 mmu-miR-667 235439 Herc1 gaacccgacccaccGUCCACAGu :||||||| aaaguuuauaauuuUAGGUGUCa 2 10 1181 1203 [mm9:9:66297611-66297633:+] 0.5280 141 7 -14.40 -0.4502 MIMAT0003891 mmu-miR-770-3p 235439 Herc1 ggucgaggugcagucCGGGUGc |||||| gauacauuuuuguaaGCCCACc 2 8 284 305 [mm9:9:66356415-66356436:+] 0.6408 120 6 -14.07 -0.1364 MIMAT0003892 mmu-miR-762 235439 Herc1 cgagacagggccGGGGUCGGGg |:||||||| gcugagccaucuCUCCAGCCCa 2 11 435 456 [mm9:9:66221016-66221037:+] 0.5006 146 7 -27.23 -0.6694 MIMAT0004188 mmu-miR-802 235439 Herc1 uuCCUA-CUUAGA-AACAAUGACu |||| || | ||||||| aaGGAUCCAAGAUGCAGUUACUGa 2 21 1160 1183 [mm9:9:66323897-66323920:+] 0.7160 142 7 -15.21 -0.8107 MIMAT0004188 mmu-miR-802 235439 Herc1 uuccuacuuaGAAACAAUGAcu :|| |||||| aguggccacaUUUAGUUACUuc 3 13 113 134 [mm9:9:66356244-66356265:+] 0.5892 128 0 -7.08 -0.1499 MIMAT0003735 mmu-miR-672 235439 Herc1 agugugUGUCAUGUGGUUGG-AGu :|||| || ||||| || auuaugGCAGUUCA-CAACCAUCu 2 18 406 428 [mm9:9:66323143-66323165:+] 0.5007 123 0 -15.04 -0.1144 MIMAT0003736 mmu-miR-670 235439 Herc1 aagugGUGUAUGUGAGUCCCUa :|||||:| ||||||| uuuuaUACAUAUA-UCAGGGAu 2 18 1485 1505 [mm9:9:66297915-66297935:+] 0.5552 163 7 -22.75 -0.6349 MIMAT0003736 mmu-miR-670 235439 Herc1 aaguGGUGUAUGUGAGUCCCUa |:| || | :||||||| ccguCUAGAU-CUUUCAGGGAu 2 19 494 514 [mm9:9:66353224-66353244:+] 0.5527 152 7 -18.43 -0.1239 MIMAT0014815 mmu-miR-3099* 235439 Herc1 guucccGA-CCUUCCUUCGACc || || ||||||| aggcccCUAGGUCAGAAGCUGa 2 16 143 164 [mm9:9:66220724-66220745:+] 0.5323 142 7 -15.73 -0.6087 MIMAT0014815 mmu-miR-3099* 235439 Herc1 guUCCCGACC----UUCCUUCGACc ||| :||| :| ||||||| gcAGGCUUGGUGCAGAUGAAGCUGa 2 20 2036 2060 [mm9:9:66354766-66354790:+] 0.5007 150 7 -18.96 -0.2128 MIMAT0014815 mmu-miR-3099* 235439 Herc1 guucccgaccuuccUUCGACc |||||| uguuuuaggaacauAAGCUGa 2 8 85 105 [mm9:9:66356216-66356236:+] 0.5892 120 6 -11.31 -0.1581 MIMAT0014816 mmu-miR-3099 235439 Herc1 agggGUUGGAGAGAGAUCGGAu | |:| | | ||||||| uaugCCAUCAC-CCCUAGCCUu 2 19 756 776 [mm9:9:66297186-66297206:+] 0.5132 148 7 -17.51 -0.1014 MIMAT0003896 mmu-miR-763 235439 Herc1 cggugaccaagaagGGUCGACc ||||||| uaaacauuuaaaagCCAGCUGg 2 9 283 304 [mm9:9:66296713-66296734:+] 0.5128 140 7 -18.54 -0.1078 MIMAT0003896 mmu-miR-763 235439 Herc1 cggugacCAAGA-AGGGUCGACc || || | ||||||| uuccuaaGUACUCUACCAGCUGu 2 16 463 485 [mm9:9:66353193-66353215:+] 0.5527 150 7 -16.68 -0.2188 MIMAT0003897 mmu-miR-759 235439 Herc1 caGUUUUAACAAACGUG-AGACg ||||: | |||| |||| guCAAAGAAGGCAGCACAUCUGc 2 21 81 103 [mm9:9:66296281-66296303:+] 0.8042 120 0 -20.05 -0.7608 MIMAT0003897 mmu-miR-759 235439 Herc1 caguuuuaacaaACGUGAGACg | ||||||| gcgcugucuacaUUCACUCUGc 2 11 1092 1113 [mm9:9:66323829-66323850:+] 0.7160 142 7 -14.53 -0.3449 MIMAT0003739 mmu-miR-673-5p 235439 Herc1 gagguucCUG-GUCUCGACACUc ||: :: |||||||| caaacuuGAUAUGUAGCUGUGAc 2 16 524 546 [mm9:9:66221105-66221127:+] 0.5012 146 7 -13.08 -0.2788 MIMAT0003739 mmu-miR-673-5p 235439 Herc1 gaGGUUCCUGGUCU--CGACACUc |:: | |::|: ||||||| ugCUGUGCUCUGGGAUGCUGUGAa 2 21 1241 1264 [mm9:9:66353971-66353994:+] 0.5520 143 7 -17.36 -0.4507 MIMAT0003739 mmu-miR-673-5p 235439 Herc1 gagguuccuggucucGACACUc |||||| gaugguuuuauuuuuCUGUGAu 2 8 154 175 [mm9:9:66356285-66356306:+] 0.5707 120 6 -8.36 -0.1204 MIMAT0003898 mmu-miR-760 235439 Herc1 aggggugucuGGGUCUCGGc ::||||||: acuauaucuuUUCAGAGCUa 2 11 738 757 [mm9:9:66323475-66323494:+] 0.5364 126 0 -15.55 -0.1842 MIMAT0003898 mmu-miR-760 235439 Herc1 aggGGUGUCUGGGUCUCGGc :::||| :|||||||| acaUUGCAG-UCCAGAGCCa 2 18 441 459 [mm9:9:66353171-66353189:+] 0.5527 155 7 -23.44 -0.3982 MIMAT0003741 mmu-miR-674* 235439 Herc1 aaCAAGACUCUACCCU-CGACAc | | || ||||| ||||| cuGCUGUGCUCUGGGAUGCUGUg 2 21 1240 1262 [mm9:9:66353970-66353992:+] 0.5520 124 0 -23.21 -0.1060 MIMAT0003451 mmu-miR-677 235439 Herc1 aguCUUCGAUUAGUAGUGACUu ||| : | || ||||||| ucuGAAAUAACUCCUCACUGAa 2 20 1530 1551 [mm9:9:66324267-66324288:+] 0.4299 159 7 -14.70 -0.4143 MIMAT0003451 mmu-miR-677 235439 Herc1 agucUUCGAU-UAGUA-GUGACUu | || | | ||| |||||| auuaAUGCCAGAACAUCCACUGAu 2 19 195 218 [mm9:9:66322932-66322955:+] 0.5183 121 6 -13.58 -0.3259 MIMAT0003451 mmu-miR-677 235439 Herc1 agUCUU-CGAU-UAGUAGU-GACUu |||: ||| ||| ||| |||| ugAGAGUUCUACAUCUUCAUCUGAa 2 21 2058 2082 [mm9:9:66354788-66354812:+] 0.5007 126 0 -14.97 -0.3595 MIMAT0004825 mmu-miR-423-5p 235439 Herc1 uuucaGAG-CGAGAGACGGGGAGu ||| || | ||||||| cuuuaCUCAGCAGU-AGCCCCUCc 2 19 787 809 [mm9:9:66353517-66353539:+] 0.5135 143 7 -19.79 -0.1182 MIMAT0003459 mmu-miR-682 235439 Herc1 guCUGA-AGU-GAC-ACUGACGUc || | ||| :|| ||||||| auGAGUAUCAGUUGAAGACUGCAa 2 20 1531 1554 [mm9:9:66297961-66297984:+] 0.5243 148 7 -14.03 -0.6073 MIMAT0003462 mmu-miR-684 235439 Herc1 aacugaacuuccCUUUUGa |||||| uguaauaacuuuGAAAACc 2 8 1250 1268 [mm9:9:66221831-66221849:+] 0.5134 120 6 -4.99 -0.1014 MIMAT0003465 mmu-miR-719 235439 Herc1 uuGUAAA--AAG-AC--AUCGG-CUCUa ||||| | | || ||||| |||| uaCAUUUGCUGCAUGACUAGCCAGAGAc 2 21 1278 1305 [mm9:9:66354008-66354035:+] 0.5854 121 0 -17.94 -0.4593 MIMAT0003466 mmu-miR-687 235439 Herc1 aguaacgacgUAAGGUCCUAUc :|||||||||| agaaucagaaGUUCCAGGAUAu 2 13 3579 3600 [mm9:9:66300009-66300030:+] 0.5008 156 7 -17.03 -0.1129 MIMAT0003468 mmu-miR-689 235439 Herc1 ccuggggcggcucgCCCCUGc |||||| agucugaggaaaagGGGGACa 2 8 307 327 [mm9:9:66298701-66298721:+] 0.7209 120 6 -16.89 -0.1950 MIMAT0003469 mmu-miR-690 235439 Herc1 aaaccaacacucGGAUCGGAAa ||||||||| uaugccaucaccCCUAGCCUUa 2 11 756 777 [mm9:9:66297186-66297207:+] 0.5132 150 7 -15.07 -0.1183 MIMAT0003469 mmu-miR-690 235439 Herc1 aaaccAACACUCGGAUCGGAAa |||| | :||||||| ucaccUUGU-A--UUAGCCUUc 2 18 716 734 [mm9:9:66297146-66297164:+] 0.5008 144 7 -11.92 -0.1030 MIMAT0003470 mmu-miR-691 235439 Herc1 aaaAGACGGAGA----GAAGUCCUUa | || |||| ||||||||| uaaUGUGACUCUUAUACUUCAGGAAu 2 20 1460 1485 [mm9:9:66297890-66297915:+] 0.5552 158 7 -20.28 -0.6564 MIMAT0003470 mmu-miR-691 235439 Herc1 aaAAGACGGAGA-GAAGUC-CUUa |||| :||:| :||||| ||| uaUUCUUUCUUUGUUUCAGAGAAu 2 21 1280 1303 [mm9:9:66297710-66297733:+] 0.5356 135 0 -17.94 -0.1390 MIMAT0003470 mmu-miR-691 235439 Herc1 aaaagacggagagaAGUCCUUa ||||||| ucgugcuagggugaUCAGGAAa 2 9 724 745 [mm9:9:66221305-66221326:+] 0.5099 140 7 -11.26 -0.8588 MIMAT0003470 mmu-miR-691 235439 Herc1 aaaagAC-GGAGAGAA-GUCCUUa || :||| ||| |||||| gcccgUGAUCUCCCUUACAGGAAg 2 18 677 700 [mm9:9:66353407-66353430:+] 0.5367 128 6 -16.39 -0.1090 MIMAT0003470 mmu-miR-691 235439 Herc1 aaaagacggagagAAGUCCUUa |||||||| gaaauaaagcagaUUCAGGAAu 2 10 426 447 [mm9:9:66356557-66356578:+] 0.5863 145 7 -14.17 -0.9889 MIMAT0003471 mmu-miR-692 235439 Herc1 cucacuccgcgagUUUCUCUa ||||||| aaauaacagaaggAAAGAGAa 2 9 2448 2468 [mm9:9:66298878-66298898:+] 0.6681 140 7 -8.31 -0.5856 MIMAT0003472 mmu-miR-693-5p 235439 Herc1 cuuUUGAAAGCCUACACCGAc :|:|||: |||||||| gauGAUUUUU--AUGUGGCUa 2 19 14 32 [mm9:9:66296444-66296462:+] 0.4532 155 7 -14.07 -0.2122 MIMAT0003472 mmu-miR-693-5p 235439 Herc1 cuuuugaaagccuACACCGAc ||||||| cuuuuaauaauuuUGUGGCUc 2 9 25 45 [mm9:9:66220606-66220626:+] 0.5011 140 7 -9.96 -0.7351 MIMAT0003472 mmu-miR-693-5p 235439 Herc1 cuUUUGAAAG-CC----UACACCGAc |||:| || || :||||||| ucAAAUUGUCAGGUAAUGUGUGGCUg 2 20 1492 1517 [mm9:9:66324229-66324254:+] 0.5822 149 7 -20.35 -0.4543 MIMAT0003472 mmu-miR-693-5p 235439 Herc1 cuUUUGAAAGCCUACACCGAc ||| | |: ||||||| acAAAGUCUU---UGUGGCUa 2 20 67 84 [mm9:9:66322804-66322821:+] 0.5125 143 7 -10.42 -1.1160 MIMAT0004189 mmu-miR-693-3p 235439 Herc1 aaugucgguguagacuUUCGACg |||||| gauguuuuaggaacauAAGCUGa 2 8 83 105 [mm9:9:66356214-66356236:+] 0.5892 120 6 -12.83 -0.1596 MIMAT0003474 mmu-miR-694 235439 Herc1 gaaguccguugUAAAAGUc :|||||| gccuuuuucuaGUUUUCAa 2 9 620 638 [mm9:9:66221201-66221219:+] 0.5037 124 6 -5.21 -0.1880 MIMAT0003474 mmu-miR-694 235439 Herc1 gaAGUCCGUUGUA-AAAGUc |:| |:| :|| ||||| aaUUAUGUACUAUAUUUCAa 2 18 640 659 [mm9:9:66221221-66221240:+] 0.5063 121 0 -4.19 -1.0912 MIMAT0003474 mmu-miR-694 235439 Herc1 gaAGUC-CGUUGUAAAAGUc |||| || |:||||||| uuUCAGAGCUAUAUUUUCAu 2 18 747 766 [mm9:9:66323484-66323503:+] 0.5364 164 7 -16.49 -1.1078 MIMAT0003474 mmu-miR-694 235439 Herc1 gaaguCCGUUGUAAAAGUc ||| |:||||||| uuuguGGCUAUAUUUUCAc 2 15 75 93 [mm9:9:66322812-66322830:+] 0.5125 158 7 -11.99 -0.6160 MIMAT0003474 mmu-miR-694 235439 Herc1 gaAGUCCGUUGUAAAA-GUc ||| |||:||||| || cuUCA-ACAAUAUUUUGCAu 2 18 20 38 [mm9:9:66322757-66322775:+] 0.5125 123 0 -11.61 -0.6778 MIMAT0003476 mmu-miR-669b 235439 Herc1 ugUACGUGUACGUGUGUUUUGa | |:: :|| ||||||| agAAGUGGGUGAUAACAAAACu 2 21 1400 1421 [mm9:9:66297830-66297851:+] 0.5552 148 7 -13.46 -0.2860 MIMAT0003476 mmu-miR-669b 235439 Herc1 uguACGUGUACGUGUGUUUUGa ||:: || :::||||||| uucUGUG-AU-UGUACAAAACa 2 20 167 186 [mm9:9:66356298-66356317:+] 0.5522 147 7 -8.75 -1.0564 MIMAT0003478 mmu-miR-467b* 235439 Herc1 cacaaccacacacaUACAUAUa ||||||| uuacuaauuuuauaAUGUAUAa 2 9 1287 1308 [mm9:9:66324024-66324045:+] 0.4936 140 7 -5.13 -0.9317 MIMAT0003478 mmu-miR-467b* 235439 Herc1 cacaaccacacacAUACAUAUa |:|||||| ugaaauuguacauUGUGUAUAa 2 10 315 336 [mm9:9:66356446-66356467:+] 0.7341 129 6 -6.71 -0.2465 MIMAT0003479 mmu-miR-669c 235439 Herc1 ugUGUGUAGGUGUGUG-UUGAUa |||:||:|| || ||||| cuACAUAUUCA---ACAAACUAg 2 21 1606 1625 [mm9:9:66298036-66298055:+] 0.5411 124 0 -16.57 -0.5311 MIMAT0004827 mmu-miR-297b-3p 235439 Herc1 auaccCAUACAC-A-CAUACAUAu |||| || | ||||||| agucaGUAUCUGCUAAUAUGUAUg 2 18 1304 1327 [mm9:9:66297734-66297757:+] 0.5250 151 7 -10.37 -0.1653 MIMAT0004827 mmu-miR-297b-3p 235439 Herc1 auACCCAUACACACAUACAUAu || ||| | ||| ||| caUGAAUAUUCAUAUAUUUAUu 2 21 362 383 [mm9:9:66356493-66356514:+] 0.7525 120 0 -4.71 -0.1257 MIMAT0003485 mmu-miR-455* 235439 Herc1 gcuACAUCAGGUUUCCGUGUAu |||:|| |||||||| cccUGUGGU----AGGCACAUc 2 20 338 355 [mm9:9:66296768-66296785:+] 0.5128 150 7 -16.74 -0.1034 MIMAT0003742 mmu-miR-455 235439 Herc1 cacaUAUACGGGCAC-CUGACg |||||: || ||||| cuugAUAUGUAGCUGUGACUGg 2 18 528 549 [mm9:9:66221109-66221130:+] 0.5012 121 0 -16.11 -0.1164 MIMAT0003488 mmu-miR-698 235439 Herc1 ucccuuccUUUGCUCUUAc |: :|||||| guauuuuuAGUUGAGAAUg 2 12 266 284 [mm9:9:66356397-66356415:+] 0.6408 127 6 -10.80 -0.1397 MIMAT0003494 mmu-miR-704 235439 Herc1 gauccucGUC-UCGUGUACAGa :|| | |||||||| uuguauuUAGCAUCACAUGUCu 2 15 1890 1911 [mm9:9:66298320-66298341:+] 0.5446 149 7 -17.32 -0.1999 MIMAT0003496 mmu-miR-706 235439 Herc1 aaaaaacucugucccAAAGAGa |||||| gugcugucacccaccUUUCUCa 2 8 10 31 [mm9:9:66356141-66356162:+] 0.4660 120 6 -5.60 -0.1238 MIMAT0003497 mmu-miR-707 235439 Herc1 gcauccguuCGCCGUACUGAc || |||||||| cauacauuuGCUGCAUGACUa 2 13 1276 1296 [mm9:9:66354006-66354026:+] 0.5854 152 7 -14.84 -0.3486 MIMAT0003498 mmu-miR-708* 235439 Herc1 gaucuUCG-AGUGU-CAGAUCAAc ||| ||||| |||||||| uauuuAGCAUCACAUGUCUAGUUc 2 18 1893 1916 [mm9:9:66298323-66298346:+] 0.5446 167 7 -21.09 -0.1257 MIMAT0003498 mmu-miR-708* 235439 Herc1 gaUCUUCGAGUGUCAGAUCAAc ||||||| | ||||||| ucAGAAGCUGAGUUUCUAGUUu 2 21 154 175 [mm9:9:66220735-66220756:+] 0.5323 168 7 -17.46 -0.3606 MIMAT0003498 mmu-miR-708* 235439 Herc1 gaUCUUCGAGUGUCAGAUCAAc || || | : ||||||| auAGCAGGCCUUUUUCUAGUUu 2 21 613 634 [mm9:9:66221194-66221215:+] 0.5037 148 7 -12.76 -0.8939 MIMAT0003499 mmu-miR-709 235439 Herc1 agGAGGACG-GAGA-CGGAGg :|::||| ||| ||||| uuUUUUUGCAGUCUGGCCUCa 2 18 505 525 [mm9:9:66221086-66221106:+] 0.5012 120 0 -20.10 -0.6921 MIMAT0003499 mmu-miR-709 235439 Herc1 agGAGGA--CGGAGACGGAGg || || || ||||||| ugCUACUAAUCCCCUGCCUCa 2 18 1436 1456 [mm9:9:66354166-66354186:+] 0.5366 148 7 -19.87 -0.1363 MIMAT0003502 mmu-miR-712 235439 Herc1 ccaUGGC-GGGCCCACUUCCUc || | ::| ||||||| gagACAGUUUCCUAUGAAGGAg 2 19 1570 1591 [mm9:9:66298000-66298021:+] 0.5292 141 7 -16.63 -0.1284 MIMAT0003502 mmu-miR-712 235439 Herc1 ccAUGGCG-GGCCCACUUC-CUc |:| || | ||||||| || gaUGCGGCACAUGGUGAAGCGAg 2 20 2707 2729 [mm9:9:66299137-66299159:+] 0.7533 122 0 -23.94 -0.1318 MIMAT0003504 mmu-miR-713 235439 Herc1 cgacacACGGAA-GUCACGu |||:|| |||||| ucacccUGCUUUGCAGUGCa 2 14 1823 1842 [mm9:9:66298253-66298272:+] 0.5564 125 6 -17.43 -0.4549 MIMAT0003504 mmu-miR-713 235439 Herc1 cgacacacggAAGUCACGu |||||||| cucuagaauaUUCAGUGCu 2 10 409 427 [mm9:9:66220990-66221008:+] 0.5003 145 7 -11.94 -0.6725 MIMAT0003504 mmu-miR-713 235439 Herc1 cgacacacgGAAGUCACGu :|||||||| uuucuucaaUUUCAGUGCc 2 11 894 912 [mm9:9:66353624-66353642:+] 0.4881 146 7 -12.78 -0.1404 MIMAT0003507 mmu-miR-500 235439 Herc1 acuugggaaCGGGUCCACGUAa ||:||||||||| cauuugaaaGCUCAGGUGCAUu 2 14 1859 1880 [mm9:9:66298289-66298310:+] 0.5939 161 7 -23.87 -0.3616 MIMAT0003507 mmu-miR-500 235439 Herc1 acuUGGGAACGGGUCCACG-UAa |:|: | ||: ||||| || ccuAUCUCUACCUCGGUGCUAUg 2 20 2535 2557 [mm9:9:66298965-66298987:+] 0.7634 123 0 -15.24 -0.2472 MIMAT0003508 mmu-miR-501-5p 235439 Herc1 aaaguGGGUCCCUGUUUCCUAa :||| |:||||||| auauuUCCAUUCAUAAAGGAUc 2 18 955 976 [mm9:9:66297385-66297406:+] 0.5614 153 7 -13.82 -0.3279 MIMAT0003508 mmu-miR-501-5p 235439 Herc1 aaaGUGGGUCCCUGUUUCCUAa | :|||||| ||||||| agcCUUCCAGGG--AAAGGAUc 2 20 1147 1166 [mm9:9:66323884-66323903:+] 0.7160 160 7 -21.78 -0.1125 MIMAT0003508 mmu-miR-501-5p 235439 Herc1 aaAGUGGGUCCCUGUUUCCUaa |::::|| | |||||| aaUUGUUCA-UUAGAAAGGAca 3 21 335 355 [mm9:9:66356466-66356486:+] 0.7525 126 0 -9.97 -0.2554 MIMAT0003509 mmu-miR-501-3p 235439 Herc1 guuuaggaaCGGGCCCACGUAa ||:| ||||||| cauuugaaaGCUCAGGUGCAUu 2 14 1859 1880 [mm9:9:66298289-66298310:+] 0.5939 153 7 -18.18 -0.3616 MIMAT0003509 mmu-miR-501-3p 235439 Herc1 guuUAGGAACGGGCCCACG-UAa |||: | ||: ||||| || ccuAUCUCUACCUCGGUGCUAUg 2 20 2535 2557 [mm9:9:66298965-66298987:+] 0.7634 127 0 -14.27 -0.2472 MIMAT0003510 mmu-miR-717 235439 Herc1 ucucuUCCAUAGAGACAGACUc ||| :|: ||||||| cgaacAGG-GUUAAUGUCUGAu 2 18 366 386 [mm9:9:66298760-66298780:+] 0.7209 147 7 -14.51 -1.0945 MIMAT0003510 mmu-miR-717 235439 Herc1 ucucuUCCAUAGAGACAGACUc ||| :|: ||||||| cgaacAGG-GUUAAUGUCUGAu 2 18 2330 2350 [mm9:9:66298760-66298780:+] 0.7209 147 7 -14.51 -0.4237 MIMAT0003510 mmu-miR-717 235439 Herc1 ucucuuccauagagACAGACUc ||||||| uacccacauuuaagUGUCUGAg 2 9 1509 1530 [mm9:9:66354239-66354260:+] 0.5366 140 7 -15.84 -0.1085 MIMAT0003510 mmu-miR-717 235439 Herc1 ucUCUUCCAUAGAGACAG-ACUc | |: | | ||||||| ||| auACAGAGAAACUCUGUCUUGAa 2 21 2643 2665 [mm9:9:66355373-66355395:+] 0.5006 128 0 -18.72 -0.2636 MIMAT0003511 mmu-miR-450b-5p 235439 Herc1 auaAGUCCUUGUAUGACGUUUu |||| : | |||||||| guaUCAGUUGAAGACUGCAAAg 2 20 1535 1556 [mm9:9:66297965-66297986:+] 0.5243 159 7 -16.78 -0.2411 MIMAT0003511 mmu-miR-450b-5p 235439 Herc1 auAAGUCCU-UGUAUG-ACGUUUu ||||| | ::| || |||||| gaUUCAGUACGUACACAUGCAAAa 2 21 707 730 [mm9:9:66323444-66323467:+] 0.5285 131 6 -20.31 -0.6000 MIMAT0003512 mmu-miR-450b-3p 235439 Herc1 uacguacGUUUUACAAGGGUUa | |||| ||||||| uuauuacCUAAAU-UUCCCAAg 2 16 1627 1647 [mm9:9:66298057-66298077:+] 0.5519 153 7 -9.46 -0.4160 MIMAT0003512 mmu-miR-450b-3p 235439 Herc1 uacguacguUUUACAAGGGUUa ||| ||||||| aucuuuauuAAAGCUUCCCAAc 2 14 2067 2088 [mm9:9:66298497-66298518:+] 0.7209 149 7 -9.75 -0.2799 MIMAT0003514 mmu-miR-718 235439 Herc1 gcugugggccggccCGCCUUc |||||| auaaaaaauuaaaaGCGGAAa 2 8 544 564 [mm9:9:66323281-66323301:+] 0.4981 120 6 -12.29 -0.3245 MIMAT0003711 mmu-miR-652 235439 Herc1 guGUUGGGAUCA-CCGCGGUAa ||| | | | |||||||| caCAAGCAAACUGGGCGCCAUg 2 20 42 63 [mm9:9:66296242-66296263:+] 0.8042 154 7 -22.38 -0.2560 MIMAT0004210 mmu-miR-804 235439 Herc1 aggucCACUCCUUGUUGAGUGu |||:||:: ||||||| gcuuuGUGGGGGGAAACUCACa 2 18 102 123 [mm9:9:66220683-66220704:+] 0.5289 165 7 -28.79 -0.4234 MIMAT0004236 mmu-miR-741 235439 Herc1 agAUGUAUCUUACCGUA-GAGAGu ||: |: ||| |:|| ||||| auUAU-UGUAAUUGUAUGCUCUCu 2 22 1601 1623 [mm9:9:66324338-66324360:+] 0.4881 127 0 -11.90 -0.6106 MIMAT0004236 mmu-miR-741 235439 Herc1 agaUGUAUCUUACCGUAGAGAGu || || | |:||||||| aacACUUACA---GUAUCUCUCu 2 21 761 780 [mm9:9:66353491-66353510:+] 0.5135 148 7 -14.34 -0.1769 MIMAT0004236 mmu-miR-741 235439 Herc1 agaUGUAUCUUACCGUA-GAGAGu :||||| |||||| ||||| caaGCAUAG--UGGCAUACUCUCa 2 21 2375 2396 [mm9:9:66355105-66355126:+] 0.5006 137 0 -24.94 -0.2922 MIMAT0004838 mmu-miR-742* 235439 Herc1 acUAAUCGUUGGU-ACACUCAu |||| :|: : ||||||| ucAUUACAGAUGGUUGUGAGUc 2 20 355 376 [mm9:9:66220936-66220957:+] 0.5000 150 7 -12.00 -0.1458 MIMAT0004838 mmu-miR-742* 235439 Herc1 acuaAUCGUUGGUACACUCAu || || |: ||||||| caggUA-CAUCUUUGUGAGUu 2 18 2415 2434 [mm9:9:66355145-66355164:+] 0.5006 151 7 -13.54 -0.1269 MIMAT0004238 mmu-miR-743a 235439 Herc1 agAUGAGUCGAACCACA-GAAAg | :|||||| |||| |||| caUUUUCAGCU--GUGUACUUUa 2 21 2336 2356 [mm9:9:66355066-66355086:+] 0.5108 129 0 -15.75 -0.7254 MIMAT0004840 mmu-miR-743b-3p 235439 Herc1 agaUAAGUCG-UACUACAG--AAAg |||| |: |||||||| ||| uucAUUCUGUAAUGAUGUCAGUUUg 2 20 1934 1958 [mm9:9:66298364-66298388:+] 0.4881 122 0 -15.00 -0.3916 MIMAT0004840 mmu-miR-743b-3p 235439 Herc1 agAUAAGUCGUACUACA-GAAAg | |||||| || ||| |||| caUUUUCAGC-UG-UGUACUUUa 2 21 2336 2356 [mm9:9:66355066-66355086:+] 0.5108 128 0 -13.38 -0.7003 MIMAT0004844 mmu-miR-880 235439 Herc1 agaUGAGUCUCUCCUACC-UCAu ||| || ||| |||| ||| uugACU-AGUGAGUAUGGCAGUu 2 20 244 265 [mm9:9:66220825-66220846:+] 0.5323 129 0 -15.87 -1.0237 MIMAT0004845 mmu-miR-881* 235439 Herc1 ucuacACUGACAAUAGAGAGAc | || | ||||||||| aacacUUACAG-UAUCUCUCUc 2 18 761 781 [mm9:9:66353491-66353511:+] 0.5135 155 7 -12.56 -0.1590 MIMAT0004848 mmu-miR-883a-5p 235439 Herc1 caUUGACGAU---GAAGAGA-GUCGu |||||||: | ||||| |||| uuAACUGCUGAGCCAUCUCUCCAGCc 2 21 429 454 [mm9:9:66221010-66221035:+] 0.5006 135 0 -23.41 -0.3643 MIMAT0004848 mmu-miR-883a-5p 235439 Herc1 caUUGACGAU-GA-AGAGA-GUCGu ::|| ||: || ||||| |||| caGGCUUCUGCCUGUCUCUCCAGCa 2 21 558 582 [mm9:9:66353288-66353312:+] 0.4932 126 0 -21.74 -0.1484 MIMAT0004849 mmu-miR-883a-3p 235439 Herc1 uaUGACUCUCGACAACG-UCAAu ||| ||| ||| ||| |||| caACUCAGA-CUG-UGCAAGUUc 2 21 2638 2658 [mm9:9:66299068-66299088:+] 0.7495 128 0 -14.70 -0.1594 MIMAT0004849 mmu-miR-883a-3p 235439 Herc1 uaugacucucgaCAACGUCAAu | ||||||| gaaaggauccaaGAUGCAGUUa 2 11 1158 1179 [mm9:9:66323895-66323916:+] 0.7160 142 7 -10.42 -0.9561 MIMAT0004850 mmu-miR-883b-5p 235439 Herc1 acUGACGAUGGGUAAGA-GUCAu |||| |:| :|||| |||| agACUG-UGCAAGUUCUCCAGUu 2 21 2644 2665 [mm9:9:66299074-66299095:+] 0.7495 126 0 -22.17 -0.2452 MIMAT0004850 mmu-miR-883b-5p 235439 Herc1 acUGACGAUGGGUAAGAGUCAu |: |: :| :| ||||||| gcAUAGUGGCAUACUCUCAGUa 2 21 2378 2399 [mm9:9:66355108-66355129:+] 0.5006 152 7 -15.03 -0.1201 MIMAT0004851 mmu-miR-883b-3p 235439 Herc1 uaUGACUCUCUACAAC-GUCAAu |:| | ||| || ||||| ucAUUCUGUAAUGAUGUCAGUUu 2 21 1935 1957 [mm9:9:66298365-66298387:+] 0.4881 120 0 -13.80 -0.3589 MIMAT0004851 mmu-miR-883b-3p 235439 Herc1 uaugaCUCUCUACAACGUCAAu || | | ||||||| gaaagGAUCCAAGAUGCAGUUa 2 18 1158 1179 [mm9:9:66323895-66323916:+] 0.7160 145 7 -11.17 -0.9592 MIMAT0004863 mmu-miR-220 235439 Herc1 uucACAGACUGU-GACAC-CACc |||: ||| :|||| ||| guaUGUUAUACAUUUGUGUGUGu 2 19 1191 1213 [mm9:9:66323928-66323950:+] 0.5960 121 0 -12.93 -0.6290 MIMAT0004864 mmu-miR-297a* 235439 Herc1 auaccCAUACAC-A-CAUACAUAu |||| || | ||||||| agucaGUAUCUGCUAAUAUGUAUg 2 18 1304 1327 [mm9:9:66297734-66297757:+] 0.5250 151 7 -10.37 -0.1653 MIMAT0004864 mmu-miR-297a* 235439 Herc1 auACCCAUACACACAUACAUAu || ||| | ||| ||| caUGAAUAUUCAUAUAUUUAUu 2 21 362 383 [mm9:9:66356493-66356514:+] 0.7525 120 0 -4.71 -0.1257 MIMAT0004866 mmu-miR-297c* 235439 Herc1 auaccCAUACAC-A-CAUACAUAu |||| || | ||||||| agucaGUAUCUGCUAAUAUGUAUg 2 18 1304 1327 [mm9:9:66297734-66297757:+] 0.5250 151 7 -10.37 -0.1653 MIMAT0004866 mmu-miR-297c* 235439 Herc1 auACCCAUACACACAUACAUAu || ||| | ||| ||| caUGAAUAUUCAUAUAUUUAUu 2 21 362 383 [mm9:9:66356493-66356514:+] 0.7525 120 0 -4.71 -0.1257 MIMAT0004867 mmu-miR-327 235439 Herc1 uaggaGUACGGGGAGUUCa |:| ::||||||| uuuggCGUAUUCCUCAAGa 2 15 1424 1442 [mm9:9:66324161-66324179:+] 0.6679 150 7 -18.63 -0.9957 MIMAT0004867 mmu-miR-327 235439 Herc1 uaGGAGUACGGGGAGUUCa |: || | ||||||| agCUGCA-GAGCCUCAAGa 2 18 397 414 [mm9:9:66353127-66353144:+] 0.5382 143 7 -15.36 -0.1233 MIMAT0004871 mmu-miR-465b-5p 235439 Herc1 guCUAGUCGU---GGUAAG-AUUUAu |||||| | |||| ||||| guGAUCAGGAAAGAAAUUCAUAAAUu 2 21 734 759 [mm9:9:66221315-66221340:+] 0.5099 123 0 -13.50 -0.6164 MIMAT0004873 mmu-miR-465c-5p 235439 Herc1 guCUAGUC---GCGGUAAG-AUUUAu |||||| | |||| ||||| guGAUCAGGAAAGAAAUUCAUAAAUu 2 21 734 759 [mm9:9:66221315-66221340:+] 0.5099 123 0 -13.89 -0.6238 MIMAT0004875 mmu-miR-466b-5p 235439 Herc1 guaCAUGUACAUGUGUGU-GUAg || :|| |::|||| ||| cuaGUCUAUCAAUGCACAUCAUu 2 20 798 820 [mm9:9:66297228-66297250:+] 0.5448 123 0 -12.06 -0.3026 MIMAT0004875 mmu-miR-466b-5p 235439 Herc1 guacauguacaUGUGUGUGUAg || ||||||| uguggggggaaACUCACACAUa 2 12 106 127 [mm9:9:66220687-66220708:+] 0.5289 147 7 -13.95 -0.5816 MIMAT0004875 mmu-miR-466b-5p 235439 Herc1 guaCAUGUACAUGUGUGUGUAg | |: || | :||||||| uuaGAAUCUG-AAGCACACAUu 2 20 425 445 [mm9:9:66353155-66353175:+] 0.5527 149 7 -12.35 -0.2134 MIMAT0004876 mmu-miR-466b-3p 235439 Herc1 agaaUACACACGCACAUACAUAu :| | ||| ||||||| gucaGUAUCUGCUAAUAUGUAUg 2 20 1305 1327 [mm9:9:66297735-66297757:+] 0.5250 151 7 -9.25 -0.1637 MIMAT0005453 mmu-miR-466b-3-3p 235439 Herc1 agaaUACACACGCACAUACAUAa :| | ||| ||||||| gucaGUAUCUGCUAAUAUGUAUg 2 20 1305 1327 [mm9:9:66297735-66297757:+] 0.5250 151 7 -7.12 -0.1637 MIMAT0004877 mmu-miR-466c-5p 235439 Herc1 auacauguacgUGUGUGUGUAg || ||||||| uguggggggaaACUCACACAUa 2 12 106 127 [mm9:9:66220687-66220708:+] 0.5289 147 7 -14.84 -0.5779 MIMAT0004877 mmu-miR-466c-5p 235439 Herc1 auaCAUGUACGUGUGUGUGUAg | |: || | :||||||| uuaGAAUCUG-AAGCACACAUu 2 20 425 445 [mm9:9:66353155-66353175:+] 0.5527 149 7 -12.24 -0.2134 MIMAT0004878 mmu-miR-466c-3p 235439 Herc1 agaaUACACACGCACAUACAUAu :| | ||| ||||||| gucaGUAUCUGCUAAUAUGUAUg 2 20 1305 1327 [mm9:9:66297735-66297757:+] 0.5250 151 7 -9.25 -0.1637 MIMAT0004879 mmu-miR-466e-5p 235439 Herc1 auaCAUGUACAUGUGUGU-GUAg || :|| |::|||| ||| cuaGUCUAUCAAUGCACAUCAUu 2 20 798 820 [mm9:9:66297228-66297250:+] 0.5448 123 0 -12.80 -0.3026 MIMAT0004879 mmu-miR-466e-5p 235439 Herc1 auacauguacaUGUGUGUGUAg || ||||||| uguggggggaaACUCACACAUa 2 12 106 127 [mm9:9:66220687-66220708:+] 0.5289 147 7 -13.95 -0.5816 MIMAT0004879 mmu-miR-466e-5p 235439 Herc1 auaCAUGUACAUGUGUGUGUAg | |: || | :||||||| uuaGAAUCUG-AAGCACACAUu 2 20 425 445 [mm9:9:66353155-66353175:+] 0.5527 149 7 -11.81 -0.2134 MIMAT0004880 mmu-miR-466e-3p 235439 Herc1 agaaUACACACGCACAUACAUAu :| | ||| ||||||| gucaGUAUCUGCUAAUAUGUAUg 2 20 1305 1327 [mm9:9:66297735-66297757:+] 0.5250 151 7 -9.25 -0.1637 MIMAT0004881 mmu-miR-466f-5p 235439 Herc1 guaCGUGUACGUGU-GUGUG-CAu |||:|| || | ||||| || caaGCAUAUUCAAAUCACACUGUc 2 20 2203 2226 [mm9:9:66354933-66354956:+] 0.5057 130 0 -17.02 -0.6664 MIMAT0004882 mmu-miR-466f-3p 235439 Herc1 cacacAUACACACACACAUAc |:||||||||||||| uuaaaUGUGUGUGUGUGUAUa 2 17 876 896 [mm9:9:66297306-66297326:+] 0.5132 176 7 -23.26 -0.3764 MIMAT0004882 mmu-miR-466f-3p 235439 Herc1 cacACAUACACACACACAUAc |||| | ||||||| aauUGUACAU---UGUGUAUa 2 19 318 335 [mm9:9:66356449-66356466:+] 0.7341 142 7 -6.85 -1.2586 MIMAT0004882 mmu-miR-466f-3p 235439 Herc1 cacacauacacacaCACAUAc |||||| auggagccauuuugGUGUAUu 2 8 250 270 [mm9:9:66356381-66356401:+] 0.6408 120 6 -6.78 -0.1885 MIMAT0004883 mmu-miR-466g 235439 Herc1 acaCACACGUACACAGACAUa || ||| |||||||| uggGUAAUCAU-UGUCUGUAa 2 19 3005 3024 [mm9:9:66299435-66299454:+] 0.5036 152 7 -12.84 -0.6571 MIMAT0004883 mmu-miR-466g 235439 Herc1 acaCACACGUACACAGACAUa | || ::| |||||||| aaaGAGUUUGU-UGUCUGUAg 2 19 1141 1160 [mm9:9:66221722-66221741:+] 0.5330 152 7 -12.65 -0.5624 MIMAT0004883 mmu-miR-466g 235439 Herc1 acacacaCGUACACAGACAUa ||| ||||||| gaguuaaGCAGAAGUCUGUAa 2 15 1122 1142 [mm9:9:66221703-66221723:+] 0.5330 146 7 -12.97 -0.9369 MIMAT0004884 mmu-miR-466h 235439 Herc1 auguguGUUCGUGUACGUGUGu | :|:| :||||||| auagguCUGGUA-GUGCACACu 2 17 3085 3105 [mm9:9:66299515-66299535:+] 0.5023 146 7 -13.82 -0.1193 MIMAT0004885 mmu-miR-467c 235439 Herc1 guGUAUAUGUACGUGC--GUGAAu |||| | || :||| ||||| agCAUAAAAAUUUACGUUCACUUa 2 21 128 151 [mm9:9:66352858-66352881:+] 0.5490 120 0 -14.44 -0.2139 MIMAT0004887 mmu-miR-467d* 235439 Herc1 cacAUCCACACACAUACAUAUa || | | | ||||||| uacUAAUUUUAU-AAUGUAUAa 2 20 1288 1308 [mm9:9:66324025-66324045:+] 0.4936 141 7 -5.13 -0.9317 MIMAT0004887 mmu-miR-467d* 235439 Herc1 cacauccacacacAUACAUAUa |:|||||| ugaaauuguacauUGUGUAUAa 2 10 315 336 [mm9:9:66356446-66356467:+] 0.7341 129 6 -7.45 -0.2465 MIMAT0004890 mmu-miR-509-5p 235439 Herc1 uacuaACGGUGU-AAGA-CCUCAu ||||||: | || ||||| cgccaUGCCACGCUGCUGGGAGUg 2 18 57 80 [mm9:9:66296257-66296280:+] 0.8042 128 0 -23.32 -0.4213 MIMAT0004892 mmu-miR-568 235439 Herc1 cacacauauguAAAUAUGUa |||||||| acuucaggaauUUUAUACAu 2 10 1475 1494 [mm9:9:66297905-66297924:+] 0.5552 145 7 -6.53 -0.5419 MIMAT0004892 mmu-miR-568 235439 Herc1 cacacaUAUGUA-AAUAUGUa | ::|| ||||||| auggccACGUAUGUUAUACAu 2 15 1183 1203 [mm9:9:66323920-66323940:+] 0.7160 145 7 -9.43 -0.7159 MIMAT0004898 mmu-miR-654-3p 235439 Herc1 uuCCACUACCAGUCGUC-UGUAu ||| | | :|||| |||| guGGUCAAAGAAGGCAGCACAUc 2 21 78 100 [mm9:9:66296278-66296300:+] 0.8042 120 0 -15.11 -0.4232 MIMAT0004898 mmu-miR-654-3p 235439 Herc1 uuCCACUACCAGUC------GUCUGUAu |||| || |||| ||||||| caGGUG-UGCUCAGAGUGCACAGACAUg 2 21 480 506 [mm9:9:66323217-66323243:+] 0.5008 149 7 -23.64 -0.1137 MIMAT0004931 mmu-miR-466d-3p 235439 Herc1 gaUACACACGCACAUACAUAu :| | ||| ||||||| caGUAUCUGCUAAUAUGUAUg 2 20 1307 1327 [mm9:9:66297737-66297757:+] 0.5250 151 7 -9.25 -0.1637 MIMAT0004932 mmu-miR-878-5p 235439 Herc1 acagaacuGUAGGUUGAUCUAu || | |||||||| uacauauuCAACAAACUAGAUu 2 15 1607 1628 [mm9:9:66298037-66298058:+] 0.5411 154 7 -12.40 -0.5635 MIMAT0004933 mmu-miR-878-3p 235439 Herc1 agAUGGGUCACACCAC-AGUACg | |:|| | ||| ||||| uaUUCUCAACAUUGUGUUCAUGa 2 21 1966 1988 [mm9:9:66298396-66298418:+] 0.5299 120 0 -12.68 -0.3903 MIMAT0004934 mmu-miR-872 235439 Herc1 ggACU-UGA--UUGUUCAUUGGAa ||| ||| | :| |||||| agUGAUACUCCAUUAUAUAACCUg 2 20 138 161 [mm9:9:66296338-66296339,66298534-66298555:+] 0.7626 121 6 -8.93 -0.1059 MIMAT0004938 mmu-miR-875-3p 235439 Herc1 guaUCGGAGUCA---UAAAAGUcc :||||: | :|||||| gcaGGCCUUUUUCUAGUUUUCAaa 3 19 616 639 [mm9:9:66221197-66221220:+] 0.5037 125 0 -11.56 -0.1056 MIMAT0004938 mmu-miR-875-3p 235439 Herc1 guaucgGAGUCAUAAAAGUCc || | ||||||| aagguaCUAUAUCUUUUCAGa 2 16 733 753 [mm9:9:66323470-66323490:+] 0.5364 143 7 -7.69 -0.7031 MIMAT0004938 mmu-miR-875-3p 235439 Herc1 guaucggagucAUAAAAGUcc |||||||| uuucagagcuaUAUUUUCAua 3 11 747 767 [mm9:9:66323484-66323504:+] 0.5364 130 0 -9.06 -0.1992 MIMAT0004938 mmu-miR-875-3p 235439 Herc1 guaucggagucaUAAAAGUCc |||||||| cuaaaagaagccAUUUUCAGc 2 10 2325 2345 [mm9:9:66355055-66355075:+] 0.5108 145 7 -11.57 -0.2148 MIMAT0004861 mmu-miR-877 235439 Herc1 ggGACGCGG-UAGAGG-AGAUg |||:||| |:||| |||| agCUGUGCCUCUUUCCGUCUAg 2 19 480 501 [mm9:9:66353210-66353231:+] 0.5527 129 0 -23.12 -0.3379 MIMAT0004862 mmu-miR-877* 235439 Herc1 acCCUCCUCCCUCUUCUCCUGu | || :| |||||||||| cuGCAGAGGCCAGAAGAGGACa 2 21 471 492 [mm9:9:66296901-66296922:+] 0.5008 164 7 -25.85 -0.1141 MIMAT0004940 mmu-miR-511 235439 Herc1 acUCACG-UCUCGUUUUCCGUa ||| : ||||: ||||||| auAGUUUGAGAGUUAAAGGCAu 2 20 1026 1047 [mm9:9:66221607-66221628:+] 0.5330 162 7 -18.37 -0.6927 MIMAT0005291 mmu-miR-582-5p 235439 Herc1 ucaUUGACCAACUUGUUGACAu || || | ||||||| uucAAAAGG-UAUCCAACUGUu 2 20 3263 3283 [mm9:9:66299693-66299713:+] 0.5091 141 7 -12.42 -0.3243 MIMAT0005291 mmu-miR-582-5p 235439 Herc1 ucauugaccaacuugUUGACAu |||||| gaauuuacaagacugAACUGUa 2 8 1232 1253 [mm9:9:66221813-66221834:+] 0.5232 120 6 -10.69 -0.1622 MIMAT0005294 mmu-miR-467e* 235439 Herc1 uauAUCCACACACAUACAUAUa || | | | ||||||| uacUAAUUUUAU-AAUGUAUAa 2 20 1288 1308 [mm9:9:66324025-66324045:+] 0.4936 141 7 -5.13 -0.9317 MIMAT0005294 mmu-miR-467e* 235439 Herc1 uauauccacacacAUACAUAUa |:|||||| ugaaauuguacauUGUGUAUAa 2 10 315 336 [mm9:9:66356446-66356467:+] 0.7341 129 6 -6.71 -0.2465 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuaUACACACGUACAUAAA-UAu |||| ||:| |||||| || gagAUGUUUGUA-GUAUUUCAUa 2 20 3319 3340 [mm9:9:66299749-66299770:+] 0.5086 133 0 -11.99 -0.2936 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuaUACACACGUACAUAAA-UAu |||||||| ||||| || acaAUGUGUGC---UAUUUCAUa 2 20 3342 3361 [mm9:9:66299772-66299791:+] 0.5178 127 0 -13.04 -0.1395 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuAUACACACGUACAUAAAUAu ||| | | :|| ||||||| uuUAUUUAUUUAUUUAUUUAUu 2 21 279 300 [mm9:9:66220860-66220881:+] 0.4815 164 7 -3.67 -1.1919 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuauacacacguacaUAAAUAu |||||| guuuuuuuaaaaaagAUUUAUu 2 8 263 284 [mm9:9:66220844-66220865:+] 0.5069 120 6 -2.16 -0.2384 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuauaCACACGUACAUAAAUAu || | | |||||||| guucaGU-UCCCAGUAUUUAUu 2 18 388 408 [mm9:9:66323125-66323145:+] 0.5004 147 7 -7.56 -0.1475 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuAUACACACGUACAUAAAUAu ||| | | ||| |||||| gcUAUAUUUUCAU-AAUUUAUa 2 21 754 774 [mm9:9:66323491-66323511:+] 0.5364 130 6 -4.71 -0.1653 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuAU-AC-ACACGUACAUA-AAUAu || || || || |||| |||| guUACUGAUGGCCACGUAUGUUAUa 2 21 1176 1200 [mm9:9:66323913-66323937:+] 0.7160 122 0 -6.97 -0.7745 MIMAT0005830 mmu-miR-466l 235439 Herc1 uuaUAC--ACACGUACAUAAAUAu ||| | | ||| ||||||| uacAUGAAUAUUCAUAUAUUUAUu 2 20 360 383 [mm9:9:66356491-66356514:+] 0.7525 158 7 -6.18 -1.3194 MIMAT0005831 mmu-miR-669k 235439 Herc1 aacguacgCACAUA-UACGUAu |||| | |||||| acagugagGUGUUUAAUGCAUa 2 14 1644 1665 [mm9:9:66324381-66324402:+] 0.4966 121 6 -15.12 -0.7262 MIMAT0005831 mmu-miR-669k 235439 Herc1 aacguACGCACAUAUACGUAu | | || |||| ||| aguuuUACAUGAAUAUUCAUa 2 17 355 375 [mm9:9:66356486-66356506:+] 0.7525 124 0 -8.53 -0.3163 MIMAT0005832 mmu-miR-669g 235439 Herc1 uaguACAGUUGUGUAUGUUACGu | |:|:: : ||||||| acuuUAUUAGUUGGAACAAUGCa 2 20 1155 1177 [mm9:9:66297585-66297607:+] 0.5280 147 7 -11.81 -0.4598 MIMAT0005832 mmu-miR-669g 235439 Herc1 uagUAC--AGUUGUGUAUGU-UACGu ||| |||::||:|||| |||| aaaAUGAUUCAGUACGUACACAUGCa 2 21 702 727 [mm9:9:66323439-66323464:+] 0.5285 139 0 -22.26 -0.9395 MIMAT0005833 mmu-miR-669d 235439 Herc1 uguauauguacguguGUGUUCa |||||| caaaagucaggguacCACAAGc 2 8 392 413 [mm9:9:66298786-66298807:+] 0.7067 120 6 -14.23 -0.1082 MIMAT0005834 mmu-miR-466i 235439 Herc1 aucacacAUACACACACACAUa |:|||||||||||| auuuaaaUGUGUGUGUGUGUAu 2 16 874 895 [mm9:9:66297304-66297325:+] 0.5132 171 7 -23.95 -0.5053 MIMAT0005835 mmu-miR-1-2-as 235439 Herc1 accUUACAUUUCUUCAUACAu |:| ||: |||||||| ugcAGUAUAGUAAAGUAUGUa 2 19 1326 1346 [mm9:9:66297756-66297776:+] 0.5144 158 7 -13.00 -0.7650 MIMAT0005835 mmu-miR-1-2-as 235439 Herc1 accUUA--CAUUUCUUCAUACAu ||| ||| | |||||||| acuAAUGAGUAUA-AAGUAUGUa 2 19 922 943 [mm9:9:66323659-66323680:+] 0.4917 155 7 -12.33 -0.8764 MIMAT0005836 mmu-miR-1186 235439 Herc1 guacGGAAAUUAAGGUCGUGAg |:||||||||||||||| cacaCUUUUAAUUCCAGCACUa 2 19 3100 3121 [mm9:9:66299530-66299551:+] 0.5023 186 7 -27.77 -0.1148 MIMAT0005836 mmu-miR-1186 235439 Herc1 guacggaaAUUAAGGUCGUGAg || |||||||| uaagaugcUACACCCAGCACUu 2 15 874 895 [mm9:9:66353604-66353625:+] 0.5008 146 7 -17.97 -0.1310 MIMAT0005837 mmu-miR-1187 235439 Herc1 aauguguguaUGUGUGUGUGUAu | || ||||||| uuguggggggAAACUCACACAUa 2 14 105 127 [mm9:9:66220686-66220708:+] 0.5289 149 7 -14.85 -0.5707 MIMAT0005837 mmu-miR-1187 235439 Herc1 aauguguguaugUGUGUGUGUAu | :||||||| gcuuagaaucugAAGCACACAUu 2 12 423 445 [mm9:9:66353153-66353175:+] 0.5527 143 7 -10.21 -0.2154 MIMAT0005838 mmu-miR-669j 235439 Herc1 acaaacguacacucAUAUACgu |||||| aaagaauaagcauaUAUAUGau 3 9 1201 1222 [mm9:9:66221782-66221803:+] 0.5330 120 0 -6.92 -0.1417 MIMAT0005839 mmu-miR-669f 235439 Herc1 uaugcACACACACAUACAUAUAc |||||||||:||||||| uuaaaUGUGUGUGUGUGUAUAUa 2 19 876 898 [mm9:9:66297306-66297328:+] 0.5132 186 7 -25.98 -0.2807 MIMAT0005839 mmu-miR-669f 235439 Herc1 uaugcacacacacaUACAUAUAc :||||||| cuauuucauagacaGUGUAUAUa 2 10 3352 3374 [mm9:9:66299782-66299804:+] 0.5178 141 7 -5.86 -0.2393 MIMAT0005839 mmu-miR-669f 235439 Herc1 uaUGCACACAC-ACAUACAU-AUAc || | || | ||| |||| ||| aaACUUCUGAGAUGUUUGUAGUAUu 2 22 3311 3335 [mm9:9:66299741-66299765:+] 0.5086 128 0 -8.25 -0.3221 MIMAT0005840 mmu-miR-669i 235439 Herc1 cauacGUACACACAUAUACgu :| | | |||||| aagaaUAAGCAUAUAUAUGau 3 17 1202 1222 [mm9:9:66221783-66221803:+] 0.5330 124 0 -6.92 -0.1417 MIMAT0005840 mmu-miR-669i 235439 Herc1 caUACGUACACACA-UAUACGu |||:| | | | |||||| uaAUGUAAAUAUCUGAUAUGCa 2 20 1075 1096 [mm9:9:66353805-66353826:+] 0.5007 123 6 -10.76 -0.8026 MIMAT0005841 mmu-miR-669h-5p 235439 Herc1 cgUGAGUUGAUAUGUGGGUAC-GUa || :| | | | ||||||| || acACAUAUCCA-AAACCCAUGACAu 2 23 2479 2502 [mm9:9:66298909-66298932:+] 0.7634 124 0 -17.52 -0.2382 MIMAT0005841 mmu-miR-669h-5p 235439 Herc1 cgUGA-GUUGAUAUGUG--GGUA-CGUa |:| ||| |:|:||| |||| ||| caAUUACAAGUGUGCACCACCAUAGCAg 2 23 592 619 [mm9:9:66221173-66221200:+] 0.5012 132 0 -19.16 -0.1760 MIMAT0005842 mmu-miR-669h-3p 235439 Herc1 acacguacacACAUAUACGUAu || |||| ||| caguuuuacaUGAAUAUUCAUa 2 13 354 375 [mm9:9:66356485-66356506:+] 0.7525 120 0 -7.48 -0.3163 MIMAT0005846 mmu-miR-467f 235439 Herc1 acaUCCACACACACACAUAUa | ||||||||||||||| uaaAUGUGUGUGUGUGUAUAu 2 19 877 897 [mm9:9:66297307-66297327:+] 0.5132 182 7 -26.58 -0.3684 MIMAT0005846 mmu-miR-467f 235439 Herc1 acauccacacacaCACAUAUa ||||||| uauuucauagacaGUGUAUAu 2 9 3353 3373 [mm9:9:66299783-66299803:+] 0.5178 140 7 -8.77 -0.3176 MIMAT0005846 mmu-miR-467f 235439 Herc1 acauccacacacACACAUAUa |||||||| gaaauuguacauUGUGUAUAa 2 10 316 336 [mm9:9:66356447-66356467:+] 0.7341 145 7 -8.34 -1.2673 MIMAT0005847 mmu-miR-1190 235439 Herc1 cugUCUCCCCUUGGAGUCGACu ||| | | ::||||||| aaaAGAAGCCAUUUUCAGCUGu 2 20 2327 2348 [mm9:9:66355057-66355078:+] 0.5108 155 7 -15.49 -0.5494 MIMAT0005848 mmu-miR-466j 235439 Herc1 aaUGUGUGUACGUGUACGUGUGu |:| :: || :||||||| aaAUAGGUCUGGUAGUGCACACu 2 22 3083 3105 [mm9:9:66299513-66299535:+] 0.5003 149 7 -14.13 -0.1180 MIMAT0005849 mmu-miR-1191 235439 Herc1 aucccgaugUAUCAUUCUGAc | | ||||||| ggcaaagggAAAAUAAGACUa 2 13 1373 1393 [mm9:9:66297803-66297823:+] 0.5144 144 7 -12.55 -0.4206 MIMAT0005849 mmu-miR-1191 235439 Herc1 aucccgauguaucaUUCUGAc |||||| uuuuaagaauuuacAAGACUg 2 8 1226 1246 [mm9:9:66221807-66221827:+] 0.5330 120 6 -11.43 -0.1442 MIMAT0005849 mmu-miR-1191 235439 Herc1 aucCCGAUGUAUCAUUCUGAc ||||:: | ||||||| uguGGCUGU-U--UAAGACUu 2 19 1510 1527 [mm9:9:66324247-66324264:+] 0.4963 145 7 -13.40 -0.5159 MIMAT0005852 mmu-miR-1194 235439 Herc1 ucCUA--GAUCGUCA--AUGA-GUAAg ||| | | |||| |||| |||| gaGAUUACCAUCAGUGAUACUCCAUUa 2 21 126 152 [mm9:9:66296326-66296339,66298534-66298546:+] 0.7626 122 0 -10.29 -1.2488 MIMAT0005852 mmu-miR-1194 235439 Herc1 uccuaGAUCGUCAAUGA-GUAAg ||||: | |||| |||| gucgcCUAGU-GAUACUCCAUUa 2 18 2095 2116 [mm9:9:66298525-66298546:+] 0.7209 123 0 -11.57 -0.6443 MIMAT0005852 mmu-miR-1194 235439 Herc1 uccUAGAUCGUCA-AUG-AGUAAg :|||| || | || ||||| cuaGUCUAUCAAUGCACAUCAUUu 2 20 798 821 [mm9:9:66297228-66297251:+] 0.5448 122 0 -8.87 -0.3426 MIMAT0005852 mmu-miR-1194 235439 Herc1 uccUA-GAUCG-UCAAUGAGUAAg || | :|| || |||||||| ugcAUGCAGGCAAGAUACUCAUUu 2 20 505 528 [mm9:9:66323242-66323265:+] 0.5001 157 7 -14.14 -0.6272 MIMAT0005853 mmu-miR-669e 235439 Herc1 uacuuGUACGUGUGUGUUCUGu :| | |: :||||||| aauuuUAAGAAUUUACAAGACu 2 18 1224 1245 [mm9:9:66221805-66221826:+] 0.5330 149 7 -11.04 -1.0914 MIMAT0005854 mmu-miR-467g 235439 Herc1 uaUAUACACACACAUACAUAu :||| || ||||||| caGUAUCUGCUAAUAUGUAUg 2 20 1307 1327 [mm9:9:66297737-66297757:+] 0.5250 151 7 -9.15 -0.1637 MIMAT0005855 mmu-miR-467h 235439 Herc1 ugUAUAU-GUACGUGUGUGA-AUa || || :|| |:||||| || uuAUUUAUUAUAAAUACACUGUAg 2 21 296 319 [mm9:9:66220877-66220900:+] 0.4815 123 0 -8.42 -0.6808 MIMAT0005857 mmu-miR-1196 235439 Herc1 uccgucuccgucCAUCUAAa ||||||| uaguuuauuuuaGUAGAUUu 2 9 180 199 [mm9:9:66220761-66220780:+] 0.5323 140 7 -8.00 -0.8526 MIMAT0005858 mmu-miR-1197 235439 Herc1 ucuucAUCUGGUACACAGGAu | ||| |||||||| uugccUUGAC--UGUGUCCUa 2 17 1391 1409 [mm9:9:66354121-66354139:+] 0.5449 149 7 -16.29 -0.1412 MIMAT0005859 mmu-miR-1198 235439 Herc1 gguucggUCGGUCCUUGUGUAu | :|| |||||||| gagaaaaAAUCAUGAACACAUa 2 16 2464 2485 [mm9:9:66298894-66298915:+] 0.6681 155 7 -15.30 -0.5862 MIMAT0007864 mmu-miR-1897-5p 235439 Herc1 gggggagaaagagGUAGGUUUc :||||||| aaucaugaacacaUAUCCAAAa 2 10 2471 2492 [mm9:9:66298901-66298922:+] 0.7634 141 7 -9.12 -0.9153 MIMAT0007864 mmu-miR-1897-5p 235439 Herc1 ggggGAGAAAGAGGUAGGUUUc | :|| ::||||||| cuagCAUUUAGAUUAUCCAAAu 2 19 94 115 [mm9:9:66352824-66352845:+] 0.5334 146 7 -8.76 -0.6089 MIMAT0007873 mmu-miR-1896 235439 Herc1 gaggagugggugguaGUCUCUc |||||| uccagugggaugaagCAGAGAu 2 8 109 130 [mm9:9:66296309-66296330:+] 0.8042 120 6 -10.52 -0.1061 MIMAT0007873 mmu-miR-1896 235439 Herc1 gaGGAGUGGGUGGUAGUCUCUc :||: |:: : ||||||| auUCUUUCUUUGUUUCAGAGAa 2 21 1281 1302 [mm9:9:66297711-66297732:+] 0.5356 148 7 -17.34 -0.4070 MIMAT0007873 mmu-miR-1896 235439 Herc1 gaggaguggguggUAGUCUCUc :||||||| guuagcaggguggGUCAGAGAa 2 10 2286 2307 [mm9:9:66355016-66355037:+] 0.5108 141 7 -10.50 -0.1080 MIMAT0007874 mmu-miR-1904 235439 Herc1 ggagggaggucucCUCGUCUUg |||||||| aaagggggacauuGAGCAGAAa 2 10 317 338 [mm9:9:66298711-66298732:+] 0.7209 145 7 -14.45 -0.9814 MIMAT0007874 mmu-miR-1904 235439 Herc1 ggAGGGAGGUCU-CCUCGUCUUg ||| : :|| | ||||||: ggUCCAGUGGGAUGAAGCAGAGa 2 21 107 129 [mm9:9:66296307-66296329:+] 0.8042 135 0 -21.73 -0.1295 MIMAT0007874 mmu-miR-1904 235439 Herc1 ggagggaggucucCUCGUCUUg |||||||| aaagggggacauuGAGCAGAAa 2 10 2281 2302 [mm9:9:66298711-66298732:+] 0.7209 145 7 -14.45 -0.3031 MIMAT0007874 mmu-miR-1904 235439 Herc1 ggagggaggUCUCCUCGUCUUg || ||||||| gaaguagugAGUUAAGCAGAAg 2 14 1114 1135 [mm9:9:66221695-66221716:+] 0.5330 141 7 -13.59 -0.6764 MIMAT0007874 mmu-miR-1904 235439 Herc1 ggagggagGUCUCCUCGUCUUg || | |||||||| guacaaaaCA-AAGAGCAGAAa 2 15 177 197 [mm9:9:66356308-66356328:+] 0.5522 148 7 -14.17 -0.7635 MIMAT0007876 mmu-miR-1907 235439 Herc1 uggagGUCUAGGAGACGACGAg ||| |:|| ||||||| ccugaCAGCUUCUGUGCUGCUg 2 18 206 227 [mm9:9:66298600-66298621:+] 0.7209 165 7 -24.20 -0.3409 MIMAT0007876 mmu-miR-1907 235439 Herc1 ugGAGGUCUAGGAGACG-ACGAg | |: |: |:||||| |||| caCCCUUGGACUUCUGCAUGCUc 2 21 187 209 [mm9:9:66296617-66296639:+] 0.5008 128 0 -26.26 -0.1382 MIMAT0007876 mmu-miR-1907 235439 Herc1 ugGAGGUCUAGGAGACGACGAg | ||:|:| ||||||| gaCCCCGGGU-AGAUGCUGCUa 2 21 523 543 [mm9:9:66353253-66353273:+] 0.5527 146 7 -25.87 -0.2411 MIMAT0007876 mmu-miR-1907 235439 Herc1 ugGAGGUCUAGGAGAC-GACGAg |||: | |||| || ||||| uuCUCU-GUUCCU-UGCCUGCUa 2 21 27 47 [mm9:9:66352757-66352777:+] 0.5334 124 0 -19.11 -0.2242 MIMAT0007877 mmu-miR-1894-5p 235439 Herc1 ucuccGUCCACCAUCCCCUCUc :|||| || ||||||| ucacuUAGGU-GU-GGGGAGAa 2 18 145 164 [mm9:9:66352875-66352894:+] 0.5490 153 7 -22.44 -0.5189 MIMAT0009391 mmu-miR-1928 235439 Herc1 cucGACCGUUACAUCGa || | ||||||| aaaCUUGAUAUGUAGCu 2 15 525 541 [mm9:9:66221106-66221122:+] 0.5012 146 7 -12.02 -0.3236 MIMAT0009394 mmu-miR-1931 235439 Herc1 cgGUAGCGUGGUCGGGAACGUa :||| : | |:||||||| auUAUCAUUACUGUCCUUGCAa 2 21 2246 2267 [mm9:9:66354976-66354997:+] 0.5108 156 7 -20.88 -0.7016 MIMAT0009396 mmu-miR-1933-5p 235439 Herc1 uuUGAUUCUGGCUUGU-GGUACUGa || | |:| || | ||||||| gaACACAUAUCCAAAACCCAUGACa 2 23 2477 2501 [mm9:9:66298907-66298931:+] 0.7634 157 7 -15.04 -0.6959 MIMAT0009396 mmu-miR-1933-5p 235439 Herc1 uuuGAUUCUGGCUUGUGGUACUGa ||: || | :|||||||||| cuuCUGUGAGCAGACACCAUGACc 2 22 1915 1938 [mm9:9:66354645-66354668:+] 0.5007 173 7 -24.32 -0.1199 MIMAT0009397 mmu-miR-1933-3p 235439 Herc1 uaucaGUGUGACUACCAGG-ACc || ||||:|||||| || auuuaCAAACUGGUGGUCCAUGg 2 18 2795 2817 [mm9:9:66299225-66299247:+] 0.7533 137 0 -28.42 -0.1860 MIMAT0009398 mmu-miR-1934 235439 Herc1 ucucCUGCUUCGUCCCCUGGUCu || |:| : |||||||| cucaGAAGGAUGGUGGGACCAGg 2 20 1467 1489 [mm9:9:66324204-66324226:+] 0.6681 155 7 -29.30 -0.4015 MIMAT0009399 mmu-miR-1935 235439 Herc1 ucucUAGGCGGUCG-GAGACGGa :||: | | ||||||| cgcuGUCUACAUUCACUCUGCCa 2 19 1093 1115 [mm9:9:66323830-66323852:+] 0.7160 141 7 -18.39 -0.8966 MIMAT0009400 mmu-miR-1936 235439 Herc1 cgGUCAAGUGUCG-UCCAGUCAAu || | :::| : | ||||||| uuCAUUCUGUAAUGAUGUCAGUUu 2 22 1934 1957 [mm9:9:66298364-66298387:+] 0.4881 148 7 -11.33 -0.4125 MIMAT0009402 mmu-miR-1938 235439 Herc1 cuggCUUGAUGUUCAGGGUGGc |:| |:||: ||||||| uggaGGA-UGCAGAUCCCACCa 2 19 1629 1649 [mm9:9:66354359-66354379:+] 0.5054 156 7 -21.72 -0.1832 MIMAT0009402 mmu-miR-1938 235439 Herc1 cuggcuugauguucaGGGUGGc |||||| auacauuuuuguaagCCCACCc 2 8 285 306 [mm9:9:66356416-66356437:+] 0.6408 120 6 -18.33 -0.1832 MIMAT0009403 mmu-miR-1939 235439 Herc1 caCGUAACCGUCCCUUAGcu ||| || |||||| aaGCAGAUUCA-GGAAUCag 3 19 432 450 [mm9:9:66356563-66356581:+] 0.5863 124 0 -13.54 -0.1418 MIMAT0009404 mmu-miR-1940 235439 Herc1 uugACGAG-GUGGAAGAGUC---AG-GAGGUa ||||| :| || || || || ||||| cagUGCUCUUAACUGCUGAGCCAUCUCUCCAg 2 25 421 452 [mm9:9:66221002-66221033:+] 0.5003 130 0 -22.96 -0.1615 MIMAT0009404 mmu-miR-1940 235439 Herc1 uuGACG-AGGUGGAAGAGUCAGG-AGGUa || | |:|||: | || ||| |||| guCUACAUUCACUCUGCCA-UCCAUCCAc 2 26 1097 1124 [mm9:9:66323834-66323861:+] 0.7160 126 0 -18.41 -0.6607 MIMAT0009406 mmu-miR-1941-3p 235439 Herc1 uacccucUAUGACGAUUCUAc | :|| ||||||| gccuccaAAGCU-CUAAGAUa 2 15 1778 1797 [mm9:9:66298208-66298227:+] 0.5447 144 7 -8.56 -0.4777 MIMAT0009406 mmu-miR-1941-3p 235439 Herc1 uaccCUCUAUGACGA-UUCUAc |: :||:| || ||||| guuuGGCGUAUUCCUCAAGAUa 2 18 1423 1444 [mm9:9:66324160-66324181:+] 0.6679 121 0 -8.01 -0.4493 MIMAT0009407 mmu-miR-1942 235439 Herc1 guuggUCUACU-UC-UGUAGACu ||| |: || ||||||| gucaaAGAAGGCAGCACAUCUGc 2 17 81 103 [mm9:9:66296281-66296303:+] 0.8042 150 7 -15.83 -0.5468 MIMAT0009407 mmu-miR-1942 235439 Herc1 guuGGUCUACUU--CUGUAGACu ::| ||||| ||||||| agcUUACAUGAAACAACAUCUGc 2 19 1649 1671 [mm9:9:66298079-66298101:+] 0.5187 153 7 -13.71 -0.1587 MIMAT0009409 mmu-miR-1944 235439 Herc1 uuAGUCUUGAACUGUAAGUCGUGUCUc ||||||:|| || | ||||||| ugUCAGAAUUUCAC---CUGCACAGAa 2 26 1781 1804 [mm9:9:66324518-66324541:+] 0.5138 173 7 -22.53 -1.1598 MIMAT0009409 mmu-miR-1944 235439 Herc1 uuAGUCUUG-AACUGUAAGUCGUGUCUc | | ||| ||| |||||||| uaUAAAAACAACCACA-GAAGCACAGAu 2 26 305 331 [mm9:9:66323042-66323068:+] 0.4733 146 7 -15.08 -0.2054 MIMAT0009409 mmu-miR-1944 235439 Herc1 uuagUCUUGAACUGUA--AGU----CGUGUCUc || || |:::| ||| ||||||| uacaAGCACCAGGUGUGCUCAGAGUGCACAGAc 2 24 471 503 [mm9:9:66323208-66323240:+] 0.5008 145 7 -18.52 -0.1335 MIMAT0009409 mmu-miR-1944 235439 Herc1 uuAGUCU--UGA-ACUGUAAGUCGUGUCUc ||||: :|| ||| : |||||||| ugUCAGGGUGCUCUGAGGAAGAGCACAGAu 2 26 1667 1696 [mm9:9:66354397-66354426:+] 0.5054 159 7 -21.80 -0.1595 MIMAT0009414 mmu-miR-1937b 235439 Herc1 acccccgagcAGGCCCUa ||||||| cauagugaguUCCGGGAc 2 9 3172 3189 [mm9:9:66299602-66299619:+] 0.5014 140 7 -15.21 -0.1592 MIMAT0009416 mmu-miR-1949 235439 Herc1 uugauacgaCUGU-AGGACC-AUAUc ||:| ||:||| |||| aaguuccagGAUAUUCUUGGCUAUAa 2 16 3587 3612 [mm9:9:66300017-66300042:+] 0.5008 122 0 -12.77 -0.6210 MIMAT0009416 mmu-miR-1949 235439 Herc1 uugaUACGACUGUAGGACC-AUAUc ||| ||::|: ||| |||| uaaaAUG--GAUGUUGUGGAUAUAc 2 21 1690 1712 [mm9:9:66324427-66324449:+] 0.5206 121 0 -9.04 -0.5734 MIMAT0009416 mmu-miR-1949 235439 Herc1 uuGAUACGACUGUAGGACCAUAUc | || :|||::| ||||||| ucCAAU-UUGAUGU--UGGUAUAc 2 23 44 64 [mm9:9:66356175-66356195:+] 0.5641 153 7 -11.32 -0.8800 MIMAT0009417 mmu-miR-1950 235439 Herc1 acugguaUAGGAAUCUACGUCu |||| |||||||| ggaaaggAUCC-AAGAUGCAGu 2 16 1157 1177 [mm9:9:66323894-66323914:+] 0.7160 153 7 -19.48 -0.7869 MIMAT0009419 mmu-miR-669m 235439 Herc1 uauacaAACACACCUACAUAUa || | | ||||||| uacuaaUUUUAU-AAUGUAUAa 2 17 1288 1308 [mm9:9:66324025-66324045:+] 0.4936 142 7 -4.83 -0.9252 MIMAT0009419 mmu-miR-669m 235439 Herc1 uauacaaacacaccUACAUAUa :|||||| ugaaauuguacauuGUGUAUAa 2 9 315 336 [mm9:9:66356446-66356467:+] 0.7341 124 6 -7.85 -0.2421 MIMAT0009424 mmu-miR-1953 235439 Herc1 gucuucGGACUCUUGAAAGGGu ||| : ||||||| uaccuuCCUCCCGUCUUUCCCu 2 17 2019 2040 [mm9:9:66298449-66298470:+] 0.7209 144 7 -14.89 -0.3543 MIMAT0009427 mmu-miR-669n 235439 Herc1 ugUGUGUAGGU---GUGUGUUUa || || || ||||||| ccACCCAGGCAAGUGACACAAAu 2 19 244 266 [mm9:9:66322981-66323003:+] 0.5355 141 7 -13.81 -0.1006 MIMAT0009428 mmu-miR-1956 235439 Herc1 aggCGACUGAGUC---GGGACCUGa | | :|||| :||||||| cuaGAUCUUUCAGGGAUCCUGGACa 2 20 498 522 [mm9:9:66353228-66353252:+] 0.5527 146 7 -19.64 -0.1250 MIMAT0009429 mmu-miR-1937c 235439 Herc1 acccccgagAAGGCCCUa |||||||| cauagugagUUCCGGGAc 2 10 3172 3189 [mm9:9:66299602-66299619:+] 0.5014 145 7 -14.73 -0.1592 MIMAT0009430 mmu-miR-1957 235439 Herc1 caGUAUACGAGAUGGU-GAc :| :| |||||||| || ccUAAGUACUCUACCAGCUg 2 18 465 484 [mm9:9:66353195-66353214:+] 0.5527 125 0 -18.73 -0.1355 MIMAT0009431 mmu-miR-1958 235439 Herc1 ugaaugacgaAGGU-GAAAGGAu |||| ||||||| aucagagcagUCCAGCUUUCCUa 2 13 2516 2538 [mm9:9:66298946-66298968:+] 0.7634 151 7 -19.08 -0.3234 MIMAT0009431 mmu-miR-1958 235439 Herc1 ugaaugacgaagguGAAAGGAu ||||||| gaagcucugggauuCUUUCCUg 2 9 697 718 [mm9:9:66353427-66353448:+] 0.5367 140 7 -13.82 -0.1352 MIMAT0009434 mmu-miR-1961 235439 Herc1 aaGAUUGAUGAUGGAGu ||| || ||||||| ucCUAUCU-CUACCUCg 2 16 2534 2549 [mm9:9:66298964-66298979:+] 0.7634 153 7 -17.18 -0.2171 MIMAT0009434 mmu-miR-1961 235439 Herc1 aaGAUUGAUGAUGGAGu || :|| ||||||| uuCU-GCUUCUACCUCc 2 16 567 582 [mm9:9:66221148-66221163:+] 0.5012 149 7 -15.76 -0.3853 MIMAT0009442 mmu-miR-1969 235439 Herc1 ugGGUACAAUUUCAGAGGUAGAa || | || : ||:||||||| uuCCCU-UUUGUGUUUCCAUCUu 2 22 652 673 [mm9:9:66323389-66323410:+] 0.5205 159 7 -21.91 -0.9170 MIMAT0009444 mmu-miR-1970 235439 Herc1 guUUCGGAUAGG---GGUCACUGUGu |:| | | || | |||||||| acAGGGCCACCCAGGCAAGUGACACa 2 22 238 263 [mm9:9:66322975-66323000:+] 0.5355 152 7 -31.05 -0.5134 MIMAT0009444 mmu-miR-1970 235439 Herc1 guUUCGGAUAGGG----GUCACUGUGu |||:||: : | |||||||| ugAAGUCUGGUACAGUGGAGUGACACu 2 22 1723 1749 [mm9:9:66324460-66324486:+] 0.5158 148 7 -22.33 -0.1446 MIMAT0009444 mmu-miR-1970 235439 Herc1 guUUCGGAUAGGGGUCAC-UGUGu ||||| | ||||||| |||: guAAGCCCA--CCCAGUGAACAUg 2 22 295 316 [mm9:9:66356426-66356447:+] 0.6782 122 0 -23.99 -0.1016 MIMAT0009445 mmu-miR-1274a 235439 Herc1 accgcggacuugucCCUGGACu ||||||| caaguauuauuuuaGGACCUGa 2 9 657 678 [mm9:9:66221238-66221259:+] 0.5081 140 7 -15.47 -1.0438 MIMAT0009455 mmu-miR-1983 235439 Herc1 ucUUUUGUA-CGAGGUCCACUc |:| ||| :|:||||||| aaAGAUCAUAAUUUCAGGUGAg 2 20 978 999 [mm9:9:66221559-66221580:+] 0.4979 158 7 -22.59 -0.8645 MIMAT0009456 mmu-miR-1839-5p 235439 Herc1 guucUGGACAAGAU--AGAUGGAa | || | ||| ||||||| guccAGCUUUCCUAUCUCUACCUc 2 19 2525 2548 [mm9:9:66298955-66298978:+] 0.7634 153 7 -13.34 -0.1142 MIMAT0009456 mmu-miR-1839-5p 235439 Herc1 guuCUGGACAAGAU--AGAUGGAa ||:| ||||: ||||||| ccuGAUC-CUUCUGCUUCUACCUc 2 20 559 581 [mm9:9:66221140-66221162:+] 0.5012 152 7 -17.26 -0.2344 MIMAT0009456 mmu-miR-1839-5p 235439 Herc1 guucuggacaagauaGAUGGAa |||||| uuuaaaaaaaaaaagCUACCUa 2 8 111 132 [mm9:9:66322848-66322869:+] 0.5125 120 6 -9.75 -0.1580 MIMAT0009459 mmu-miR-1982* 235439 Herc1 ggagggguccugGGAGGGUu ||||||| cuucugcuucuaCCUCCCAa 2 9 566 585 [mm9:9:66221147-66221166:+] 0.5012 140 7 -21.78 -0.9137 MIMAT0009461 mmu-miR-1982.2 235439 Herc1 gacacccucuuguAUCCCACu ||||||| guucacaucgugcUAGGGUGa 2 9 717 737 [mm9:9:66221298-66221318:+] 0.5099 140 7 -13.78 -0.3684 MIMAT0011210 mmu-miR-2134 235439 Herc1 cguggggcaaagGGUUCUg |||||| uaacuuugaaaaCCAAGAa 2 8 1255 1273 [mm9:9:66221836-66221854:+] 0.5134 120 6 -15.64 -0.3073 MIMAT0011211 mmu-miR-2135 235439 Herc1 caAAGCCGGGGU--UCUGGAGa | | |||| | ||||||| uaUGCAGCCCAAGUAGACCUCa 2 19 685 706 [mm9:9:66297115-66297136:+] 0.5008 153 7 -20.24 -0.3045 MIMAT0011212 mmu-miR-2136 235439 Herc1 guguagagucaGUUGUGGGUc | ||||||| aaaauaagaugCUACACCCAg 2 11 870 890 [mm9:9:66353600-66353620:+] 0.5008 142 7 -16.16 -0.1572 MIMAT0011212 mmu-miR-2136 235439 Herc1 guGUAGAGUCAGU--UGUGGGUc |||:|: || | |||||| uaCAUUUUUGUAAGCCCACCCAg 2 20 286 308 [mm9:9:66356417-66356439:+] 0.6782 126 6 -21.40 -0.1020 MIMAT0011221 mmu-miR-2145 235439 Herc1 uuggucCGGGCUGGGACGa |::| ||||||| auguuuGUUC-ACCCUGCu 2 14 1815 1832 [mm9:9:66298245-66298262:+] 0.5564 143 7 -18.51 -0.1318 MIMAT0011221 mmu-miR-2145 235439 Herc1 uugguccgGGCUGGGACGa :| ||||||| uuagauagUCAACCCUGCu 2 12 8 26 [mm9:9:66220589-66220607:+] 0.4258 143 7 -18.34 -0.9537 MIMAT0011222 mmu-miR-2146 235439 Herc1 guGUACCUUGGGAAGAGGUg ::|| || ||||||| acUGUGCAA--GUUCUCCAg 2 19 2646 2663 [mm9:9:66299076-66299093:+] 0.7495 143 7 -10.24 -0.1192 MIMAT0011222 mmu-miR-2146 235439 Herc1 guguacCUUGGGA-AGAGGUg ||:|| | |||||| acugcuGAGCCAUCUCUCCAg 2 15 432 452 [mm9:9:66221013-66221033:+] 0.5006 122 6 -15.86 -0.1618 MIMAT0011286 mmu-miR-2182 235439 Herc1 gcGCCGCACCCUUUACACCGCa | || || :|||||||| caCUGC-UGUUUGAUGUGGCGc 2 21 175 195 [mm9:9:66298569-66298589:+] 0.7209 150 7 -18.25 -0.4805 MIMAT0011286 mmu-miR-2182 235439 Herc1 gcgccgcacccuuuACACCGca |||||| cuauacaaagucuuUGUGGCua 3 9 63 84 [mm9:9:66322800-66322821:+] 0.5125 120 0 -7.53 -0.1142 MIMAT0012771 mmu-miR-432 235439 Herc1 gacGGGUGAC-UAGAU-GA-GGUUCu ||: ||| |||| || ||||| gauCCUUCUGCUUCUACCUCCCAAGu 2 21 562 587 [mm9:9:66221143-66221168:+] 0.5012 126 0 -20.09 -0.1433 MIMAT0012772 mmu-miR-599 235439 Herc1 caaacuauUUGACUGUGUu || ||||||| acccaggcAAGUGACACAa 2 12 246 264 [mm9:9:66322983-66323001:+] 0.5355 147 7 -13.09 -0.2618 MIMAT0012773 mmu-miR-767 235439 Herc1 acGAGUCUGUUGGUAC-CACGu :||| | :|| ||| |||| auUUCAUA-GACAAUGUGUGCu 2 20 3333 3353 [mm9:9:66299763-66299783:+] 0.5086 121 0 -13.87 -0.2698 MIMAT0012774 mmu-miR-664 235439 Herc1 auccgacCCCUCAUUUACUUAu | || | ||||||| caucuaaGUGACU-AAUGAAUa 2 16 352 372 [mm9:9:66296782-66296802:+] 0.5070 145 7 -8.75 -0.3963 MIMAT0012774 mmu-miR-664 235439 Herc1 auccgaccccucauuUACUUAu |||||| aaaggacaguuuuacAUGAAUa 2 8 348 369 [mm9:9:66356479-66356500:+] 0.7525 120 6 -9.65 -0.7277 MIMAT0014853 mmu-miR-3072 235439 Herc1 ucuuccgAAGGACCUCCCCCGu | ::| ||||||| gaccaugUGUUUAAAGGGGGCg 2 16 2490 2511 [mm9:9:66355220-66355241:+] 0.5006 143 7 -19.07 -0.2771 MIMAT0015641 mmu-miR-3470b 235439 Herc1 ggucggaccagaugUCUCACu |||||| ugagcagaaaccugAGAGUGa 2 8 329 349 [mm9:9:66298723-66298743:+] 0.7209 120 6 -17.19 -0.1527 MIMAT0015642 mmu-miR-3471 235439 Herc1 uuACGGAAUGU-CAACCUAGAGu | || | || ||||||| auUUCCAUUCAUAAAGGAUCUCa 2 21 957 979 [mm9:9:66297387-66297409:+] 0.5614 143 7 -15.34 -0.7516 MIMAT0015644 mmu-miR-1186b 235439 Herc1 caCCACGUACGGAAAUUAGGGu || :| ||||||||||| guGGGAUACACCUUUAAUCCCa 2 21 2563 2584 [mm9:9:66355293-66355314:+] 0.5006 164 7 -26.01 -0.1829 MIMAT0015645 mmu-miR-3473 235439 Herc1 ccGACUCGGUAGAGAGGu ||||||||||||||| ugCUGAGCCAUCUCUCCa 2 17 434 451 [mm9:9:66221015-66221032:+] 0.5006 180 7 -36.43 -0.2374 MIMAT0015645 mmu-miR-3473 235439 Herc1 ccGACUCGGUAGAGAGGu ||| |::||||||| uuCUG-CCUGUCUCUCCa 2 17 563 579 [mm9:9:66353293-66353309:+] 0.4932 150 7 -20.68 -0.1125 MIMAT0015645 mmu-miR-3473 235439 Herc1 ccgacucgguAGAGAGGu ||||||| uuacaguaucUCUCUCCu 2 9 766 783 [mm9:9:66353496-66353513:+] 0.5135 140 7 -13.15 -0.1340 MIMAT0000121 mmu-let-7g 235439 Herc1 uuGACAUGUUUGAUGAUGGAGu || | | | || ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 154 7 -16.10 -0.2211 MIMAT0000121 mmu-let-7g 235439 Herc1 uugacauguuUGAUGAUGGAGu :|| ||||||| ugauccuucuGCUUCUACCUCc 2 13 561 582 [mm9:9:66221142-66221163:+] 0.5012 148 7 -13.05 -0.3975 MIMAT0000122 mmu-let-7i 235439 Herc1 uugucguGUUUGAUGAUGGAGu | | || ||||||| agcuuucCUAUCU-CUACCUCg 2 16 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 145 7 -16.89 -0.2232 MIMAT0000122 mmu-let-7i 235439 Herc1 uugucguguuUGAUGAUGGAGu :|| ||||||| ugauccuucuGCUUCUACCUCc 2 13 561 582 [mm9:9:66221142-66221163:+] 0.5012 148 7 -12.84 -0.4006 MIMAT0000124 mmu-miR-15b 235439 Herc1 acauuugguacuACACGACGAu ||||||||| ccugacagcuucUGUGCUGCUg 2 11 206 227 [mm9:9:66298600-66298621:+] 0.7209 150 7 -17.81 -0.3465 MIMAT0000124 mmu-miR-15b 235439 Herc1 acaUUUGGUACUA-C-ACGACGAu :| || |:| | ||||||| acaGACCCCGGGUAGAUGCUGCUa 2 20 520 543 [mm9:9:66353250-66353273:+] 0.5527 145 7 -19.72 -0.2411 MIMAT0000125 mmu-miR-23b 235439 Herc1 ccAU-UAGGGAC---CGUUACACUa || ||:::|| :||||||| auUAUAUUUUUGUAAUUAAUGUGAc 2 20 1444 1468 [mm9:9:66297874-66297898:+] 0.5552 145 7 -11.90 -0.5928 MIMAT0000125 mmu-miR-23b 235439 Herc1 ccauuagggaccgUUACACUa ||||||| ugccaaagaagaaAAUGUGAa 2 9 1044 1064 [mm9:9:66323781-66323801:+] 0.7160 140 7 -9.15 -1.1494 MIMAT0000126 mmu-miR-27b 235439 Herc1 cgUCUUGAAUCGGUGACACUu | || || :||||||| guAUAAAGUAUGUACUGUGAa 2 20 930 950 [mm9:9:66323667-66323687:+] 0.4396 151 7 -13.07 -0.5685 MIMAT0000126 mmu-miR-27b 235439 Herc1 cgucuugaaucgguGACACUu |||||| augguuuuauuuuuCUGUGAu 2 8 155 175 [mm9:9:66356286-66356306:+] 0.5707 120 6 -9.65 -0.1157 MIMAT0000127 mmu-miR-29b 235439 Herc1 uugugaCUA-AAGUUUAC-CACGAu ||| | |:||| ||||| cacgagGAUGUGGAGAUGCGUGCUg 2 18 2669 2693 [mm9:9:66299099-66299123:+] 0.7533 120 0 -19.50 -0.1378 MIMAT0000127 mmu-miR-29b 235439 Herc1 uuGUGACUAAAGUUUACCACGAu ||||| | || |||||||| guCACUGCAUGCACAUGGUGCUc 2 22 905 927 [mm9:9:66221486-66221508:+] 0.5007 173 7 -22.33 -0.1978 MIMAT0000133 mmu-miR-101a 235439 Herc1 aagUCA-AUAGUGU-CAUGACAu ||| || ::| ||||||| augAGUAUAAAGUAUGUACUGUg 2 19 926 948 [mm9:9:66323663-66323685:+] 0.4917 148 7 -13.16 -0.5758 MIMAT0000134 mmu-miR-124 235439 Herc1 ccgUAAGUGGCGCACG-GAAu | ||||: |||| ||| ugaAGUCACUUAGUGCUCUUc 2 18 2556 2576 [mm9:9:66298986-66299006:+] 0.7634 121 0 -12.93 -0.2487 MIMAT0004528 mmu-miR-125a-3p 235439 Herc1 ccgaggguUCUUGGAGUGGACa ||||::||||||| ccagugucAGAAUUUCACCUGc 2 15 1777 1798 [mm9:9:66324514-66324535:+] 0.5138 162 7 -22.41 -0.3079 MIMAT0000140 mmu-miR-128 235439 Herc1 uuucUC-UGGCCA--AGUGACACu || | :||| ||||||| agccAGCAGUGGUACACACUGUGa 2 18 1810 1833 [mm9:9:66354540-66354563:+] 0.5007 143 7 -18.91 -0.2627 MIMAT0000140 mmu-miR-128 235439 Herc1 uuUCUCUGG-CCAAGU-GACACu ||| :|| |||| ||||| aaAGAAGCCAUUUUCAGCUGUGu 2 20 2328 2350 [mm9:9:66355058-66355080:+] 0.5108 122 0 -17.11 -0.4086 MIMAT0000140 mmu-miR-128 235439 Herc1 uuucucuGGCCAAGUGACACu ::|| |||||||| guauuuuUUGG-UCACUGUGg 2 15 220 239 [mm9:9:66356351-66356370:+] 0.5522 148 7 -19.14 -0.8395 MIMAT0000147 mmu-miR-135a 235439 Herc1 aguguauccuUAUUUUUCGGUAu | ||:||||||| ccugcccucuAAAAGAAGCCAUu 2 14 2317 2339 [mm9:9:66355047-66355069:+] 0.5108 153 7 -12.40 -0.3316 MIMAT0000148 mmu-miR-136 235439 Herc1 gguAGUAGUUUUGUUUAC-CUCa |||| |: | ||||| ||| cauUCAUGAGUA-AAAUGAGAGa 2 20 220 241 [mm9:9:66220801-66220822:+] 0.5323 125 0 -12.71 -0.8203 MIMAT0000151 mmu-miR-140 235439 Herc1 gaugguauccCAUUUUGGUGAc || :||||||| cuggaacccuGU-GAACCACUg 2 13 159 179 [mm9:9:66298553-66298573:+] 0.7209 142 7 -16.69 -0.5203 MIMAT0000156 mmu-miR-144 235439 Herc1 ucAUGUAGUAGAUAUG-ACAu |:| ||| |||||| ||| ggUGC-UCAGCUAUACAUGUa 2 19 921 940 [mm9:9:66221502-66221521:+] 0.5007 128 0 -18.27 -0.2271 MIMAT0000156 mmu-miR-144 235439 Herc1 ucAUGUAGUAGAUAUGACAu ||: |:| || |||||| uuUAU-UUAGCUUUACUGUa 2 19 785 803 [mm9:9:66323522-66323540:+] 0.5356 128 6 -11.01 -0.1013 MIMAT0000156 mmu-miR-144 235439 Herc1 ucAUG-UAGUAGAUAUGACAu ||| ||:| ||||||| uuUACUAUUA--AAUACUGUg 2 19 1790 1808 [mm9:9:66354520-66354538:+] 0.5006 146 7 -10.59 -0.2290 MIMAT0000157 mmu-miR-145 235439 Herc1 ucccUAAGGACCCUUUUGACCUg :|| : | |||||||| aaauGUUGUAGCUUAAACUGGAa 2 20 650 672 [mm9:9:66297080-66297102:+] 0.5008 147 7 -12.45 -0.2770 MIMAT0000158 mmu-miR-146a 235439 Herc1 uuGGGUACCUUAAG-UCAAGAGu |:|| :| | ||||||| aaCUCAGACUGUGCAAGUUCUCc 2 21 2639 2661 [mm9:9:66299069-66299091:+] 0.7495 143 7 -15.55 -0.1337 MIMAT0000158 mmu-miR-146a 235439 Herc1 uuggguaccuuaagUCAAGAGu ||||||| uugcugaucccaaaAGUUCUCg 2 9 2603 2624 [mm9:9:66299033-66299054:+] 0.7545 140 7 -15.96 -0.2786 MIMAT0000160 mmu-miR-150 235439 Herc1 guGACCAUGUUCCCAACCCUCu || ||| :|| ||||||| cuCUUGUAAGAGAUUUGGGAGu 2 21 43 64 [mm9:9:66220624-66220645:+] 0.5073 164 7 -17.62 -0.7562 MIMAT0000162 mmu-miR-152 235439 Herc1 gguucaaGACAGUACGUG-ACu ||| ||||||| || guggucaCUG-CAUGCACAUGg 2 15 902 922 [mm9:9:66221483-66221503:+] 0.5007 120 0 -17.85 -0.3528 MIMAT0000164 mmu-miR-154 235439 Herc1 gcuuccGUUGUGCCUAUUGGAu || :|: ||||||| auacucCAUUAU--AUAACCUg 2 17 142 161 [mm9:9:66298536-66298555:+] 0.7209 141 7 -10.75 -0.9819 MIMAT0000164 mmu-miR-154 235439 Herc1 gcuuccGUUGUGCCUAUUGGAu || :|: ||||||| auacucCAUUAU--AUAACCUg 2 17 2106 2125 [mm9:9:66298536-66298555:+] 0.7209 141 7 -10.75 -0.3167 MIMAT0000164 mmu-miR-154 235439 Herc1 gcuuccGUUGUG--CCUAUUGGAu | |||| ||||||| gaauccCUACACUUUCAUAACCUu 2 17 1165 1188 [mm9:9:66221746-66221769:+] 0.5330 143 7 -10.89 -0.6036 MIMAT0000165 mmu-miR-155 235439 Herc1 uggggAUAG--UGUUAAUCGUA-AUu |||: | ||| ||||| || uauuaUAUUAAAGAAUAAGCAUAUAu 2 19 1192 1217 [mm9:9:66221773-66221798:+] 0.5330 121 0 -6.48 -1.1505 MIMAT0000208 mmu-miR-10b 235439 Herc1 guGUUUAAGC--CAAG-AUGUCCCAu || || | || | ||||||| ucCAUUUUAGAUGUGCGAACAGGGUu 2 22 351 376 [mm9:9:66298745-66298770:+] 0.7209 143 7 -15.02 -1.0703 MIMAT0000208 mmu-miR-10b 235439 Herc1 guGUUUAAGC--CAAG-AUGUCCCAu || || | || | ||||||| ucCAUUUUAGAUGUGCGAACAGGGUu 2 22 2315 2340 [mm9:9:66298745-66298770:+] 0.7209 143 7 -15.02 -0.3930 MIMAT0000213 mmu-miR-184 235439 Herc1 ugggaaUAGUCAA-GAGG-CAGGu ||| ||| |||| |||| acaaccAUCUGUUGCUCCAGUCCc 2 17 419 442 [mm9:9:66323156-66323179:+] 0.5007 127 0 -20.13 -0.1532 MIMAT0000214 mmu-miR-185 235439 Herc1 aguccUUGACG----GAAAGAGAGGu |||||| | ||||||| cucuuAACUGCUGAGCCAUCUCUCCa 2 18 426 451 [mm9:9:66221007-66221032:+] 0.5006 148 7 -21.58 -0.2461 MIMAT0000214 mmu-miR-185 235439 Herc1 aguccuuGACGGAAAGAGAGGu |||||| ||||||| caggcuuCUGCCUGUCUCUCCa 2 16 558 579 [mm9:9:66353288-66353309:+] 0.4932 167 7 -32.77 -0.1114 MIMAT0000214 mmu-miR-185 235439 Herc1 aguccuUGACGGAAAGAGAGGu || |: | ||||||| acacuuACAGUAUCUCUCUCCu 2 17 762 783 [mm9:9:66353492-66353513:+] 0.5135 152 7 -13.91 -0.1314 MIMAT0000215 mmu-miR-186 235439 Herc1 ucggguuuuccucuUAAGAAAc ||||||| ccacguuuacuuuuAUUCUUUc 2 9 1267 1288 [mm9:9:66297697-66297718:+] 0.5356 140 7 -6.41 -0.1672 MIMAT0000215 mmu-miR-186 235439 Herc1 ucgggUUUUCCUCUUA-AGAAAc |||:| | || ||||| aaaagAAAGGUACUAUAUCUUUu 2 18 727 749 [mm9:9:66323464-66323486:+] 0.5364 121 0 -7.45 -0.5495 MIMAT0000215 mmu-miR-186 235439 Herc1 ucggguuuuccUCUUAAGAAAc | |||||||| uguguacuuuaAAAAUUCUUUu 2 12 2346 2367 [mm9:9:66355076-66355097:+] 0.5108 147 7 -6.69 -0.7251 MIMAT0000219 mmu-miR-24 235439 Herc1 gaCAAGGA-CGACUUGACUCGGu | ||:| ||| ||||||| guGCUCUUAACUG--CUGAGCCa 2 21 423 443 [mm9:9:66221004-66221024:+] 0.5003 148 7 -20.57 -0.3913 MIMAT0000219 mmu-miR-24 235439 Herc1 gacaaggacgacuuGACUCGGu ||||||| ccacauuuaaguguCUGAGCCa 2 9 1512 1533 [mm9:9:66354242-66354263:+] 0.5366 140 7 -16.43 -0.6370 MIMAT0000220 mmu-miR-190 235439 Herc1 ugGAUUAUAUAGUUUGUAUAGu ||: |: | | |||||||| ugCUGCUGGACCUAACAUAUCu 2 21 220 241 [mm9:9:66298614-66298635:+] 0.7209 160 7 -11.75 -0.8474 MIMAT0000220 mmu-miR-190 235439 Herc1 ugGAUUAUAUAGUUUGUAUAGu ||: |: | | |||||||| ugCUGCUGGACCUAACAUAUCu 2 21 2184 2205 [mm9:9:66298614-66298635:+] 0.7209 160 7 -11.75 -0.2110 MIMAT0000220 mmu-miR-190 235439 Herc1 uggaUUAUA-UAGUU-UGUAUAGu || || || || ||||||| agaaAAAAUCAUGAACACAUAUCc 2 19 2465 2488 [mm9:9:66298895-66298918:+] 0.6681 156 7 -8.30 -0.2178 MIMAT0000225 mmu-miR-195 235439 Herc1 cgguuauaAAGACACGACGAu |||||||||||| cugacagcUUCUGUGCUGCUg 2 14 207 227 [mm9:9:66298601-66298621:+] 0.7209 165 7 -24.32 -0.3465 MIMAT0000225 mmu-miR-195 235439 Herc1 cgguuauaaagacACGACGAu ||||||| gaccccggguagaUGCUGCUa 2 9 523 543 [mm9:9:66353253-66353273:+] 0.5527 140 7 -15.68 -0.2476 MIMAT0000233 mmu-miR-200b 235439 Herc1 aguAGUAAUGGUCCGUCAUAAu ||| | || ||||||| gguUCAGUUCC---CAGUAUUu 2 20 387 405 [mm9:9:66323124-66323142:+] 0.5004 147 7 -10.29 -0.1840 MIMAT0000236 mmu-miR-203 235439 Herc1 gaucaCCAGGAUUUGUAAAGUg | || : :||||||| ugaaaGCUCAGGUGCAUUUCAu 2 18 1863 1884 [mm9:9:66298293-66298314:+] 0.5939 145 7 -10.56 -0.1636 MIMAT0000236 mmu-miR-203 235439 Herc1 gaucacCAGGAUUUGUAAAGUg || || |:|||||| aauuauGUACU--AUAUUUCAa 2 17 640 659 [mm9:9:66221221-66221240:+] 0.5063 133 6 -7.64 -0.1018 MIMAT0000236 mmu-miR-203 235439 Herc1 gaUCACCAGGAUUUGU-AAAGUg |||| :| ||| ||||| gaAGUGAAUCCCUACACUUUCAu 2 21 1160 1182 [mm9:9:66221741-66221763:+] 0.5330 120 0 -14.80 -0.5683 MIMAT0000236 mmu-miR-203 235439 Herc1 gaucACCAGGAUUUGUA-AAGUg ||| || ||:||| |||| ucccUGGGCC-AAGCAUAUUCAa 2 19 2194 2215 [mm9:9:66354924-66354945:+] 0.5057 128 0 -14.44 -0.1410 MIMAT0000237 mmu-miR-204 235439 Herc1 uccguauccUACUGUUUCCCUu :||:|||||||| aagaaagauGUGGCAAAGGGAa 2 14 1362 1383 [mm9:9:66297792-66297813:+] 0.5144 157 7 -20.17 -0.2108 MIMAT0000238 mmu-miR-205 235439 Herc1 gucugaggccaccuUACUUCCu ||||||| ugagacaguuuccuAUGAAGGa 2 9 1569 1590 [mm9:9:66297999-66298020:+] 0.5292 140 7 -19.45 -0.2783 MIMAT0000238 mmu-miR-205 235439 Herc1 gucUGA-GGCCACCUUACUUCCu |:| |: | |||||||| cauAUUGCUAUUACAAUGAAGGc 2 20 124 146 [mm9:9:66220705-66220727:+] 0.4956 146 7 -10.42 -0.1504 MIMAT0000247 mmu-miR-143 235439 Herc1 cuCGAUGUCACGAAGUAG-AGu | | |||| | ||||| || aaGGUUCAGUCCAUCAUCAUCa 2 20 1990 2011 [mm9:9:66354720-66354741:+] 0.5007 127 0 -15.92 -0.1707 MIMAT0000247 mmu-miR-143 235439 Herc1 cucGAUGUCACGAAGU-AGAGu ||:: || ||||| |||| gccCUGU-GUUCUUCACUCUCu 2 19 910 930 [mm9:9:66353640-66353660:+] 0.4881 124 0 -14.04 -0.1057 MIMAT0000248 mmu-miR-30e 235439 Herc1 gaaggucAGUUC-CUAC-AAAUGu ||||| ||| ||||| aacgggcUCAAGCUAUGAUUUACa 2 16 2778 2801 [mm9:9:66299208-66299231:+] 0.7533 122 0 -14.70 -0.3609 MIMAT0000248 mmu-miR-30e 235439 Herc1 gaagGUCAGUUCCUACAA-AUGu ::| || | ||||| ||| cugaUGGCCACGUAUGUUAUACa 2 19 1180 1202 [mm9:9:66323917-66323939:+] 0.7160 122 0 -9.90 -0.9795 MIMAT0000366 mmu-miR-290-5p 235439 Herc1 uuucACGGGGGUAUCAA-ACUCa |||:: :| |||| |||| uuguUGCUUAUAAAGUUAUGAGu 2 19 1514 1536 [mm9:9:66297944-66297966:+] 0.5397 126 0 -12.96 -0.1503 MIMAT0000366 mmu-miR-290-5p 235439 Herc1 uuucacgggggUAUCAAACUCa |||||||||| agaagagaaugAUAGUUUGAGa 2 12 1015 1036 [mm9:9:66221596-66221617:+] 0.5200 155 7 -16.76 -1.1412 MIMAT0000369 mmu-miR-292-5p 235439 Herc1 guUUUCUC-GGGGGUCAAACUCa :||||| : :|||||||| aaGAAGAGAAUGAUAGUUUGAGa 2 21 1014 1036 [mm9:9:66221595-66221617:+] 0.5200 155 7 -21.66 -1.1328 MIMAT0004576 mmu-miR-296-3p 235439 Herc1 ccUCUCGGA--GGUGGGUUGGGAg ||: ||| |: ||||||| uuAGGACCUGAGGAUGCAACCCUa 2 21 668 691 [mm9:9:66221249-66221272:+] 0.5099 147 7 -18.78 -0.5521 MIMAT0004576 mmu-miR-296-3p 235439 Herc1 ccucucggagGUGGGUUGGGAg :| :||||||| aauuguuagaUAGUCAACCCUg 2 13 3 24 [mm9:9:66220584-66220605:+] 0.4258 144 7 -16.01 -0.8268 MIMAT0004576 mmu-miR-296-3p 235439 Herc1 ccucucggagguGGGUUGGGAg |:||||||| aaaccagugauuCUCAACCCUc 2 11 953 974 [mm9:9:66353683-66353704:+] 0.4881 146 7 -22.21 -0.1323 MIMAT0004577 mmu-miR-299 235439 Herc1 uucgccAAAUGGCA-GGGUGUAu |||| || ||||||| cacuucUUUA--GUACCCACAUu 2 17 1498 1518 [mm9:9:66354228-66354248:+] 0.5366 148 7 -18.70 -0.3183 MIMAT0000381 mmu-miR-34c 235439 Herc1 cguuAGUCGAUUGAUGUGACGGa |:|| | | |||||||| uucuUUAG-AACCAACACUGCCa 2 20 443 464 [mm9:9:66298837-66298858:+] 0.6326 153 7 -15.44 -1.1521 MIMAT0000381 mmu-miR-34c 235439 Herc1 cguuAGUCGAUUGAUGUGACGGa |:|| | | |||||||| uucuUUAG-AACCAACACUGCCa 2 20 2407 2428 [mm9:9:66298837-66298858:+] 0.6326 153 7 -15.44 -0.6428 MIMAT0000381 mmu-miR-34c 235439 Herc1 cguuaGUCGAUUGAUGU-GACGGa || ||| ||| ||||| gcuuaCAUGAAACAACAUCUGCCu 2 19 1650 1673 [mm9:9:66298080-66298103:+] 0.5187 122 0 -15.77 -0.2107 MIMAT0000381 mmu-miR-34c 235439 Herc1 cguuagucGAUUGAU-GUGACGGa |||:| | ||||||| aucugggcCUAGCAAGCACUGCCc 2 16 641 664 [mm9:9:66353371-66353394:+] 0.5367 154 7 -18.08 -0.1883 MIMAT0000382 mmu-miR-34b-5p 235439 Herc1 uguuagucgauuaaUGUGACGGa |||||||| uuucuuuagaaccaACACUGCCa 2 10 442 464 [mm9:9:66298836-66298858:+] 0.6326 145 7 -15.29 -1.1521 MIMAT0000382 mmu-miR-34b-5p 235439 Herc1 uguuagucgauuaaUGUGACGGa |||||||| uuucuuuagaaccaACACUGCCa 2 10 2406 2428 [mm9:9:66298836-66298858:+] 0.6326 145 7 -15.29 -0.6428 MIMAT0000382 mmu-miR-34b-5p 235439 Herc1 uguuagucGAUUAAU-GUGACGGa |||: | ||||||| aucugggcCUAGCAAGCACUGCCc 2 16 641 664 [mm9:9:66353371-66353394:+] 0.5367 146 7 -16.19 -0.1883 MIMAT0000383 mmu-let-7d 235439 Herc1 uuGAUACGUUGGAUGAUGGAGa || | | |:|| ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 158 7 -17.35 -0.2211 MIMAT0000383 mmu-let-7d 235439 Herc1 uugauacguugGAUGAUGGAGa || ||||||| ugauccuucugCUUCUACCUCc 2 12 561 582 [mm9:9:66221142-66221163:+] 0.5012 147 7 -15.31 -0.3944 MIMAT0000385 mmu-miR-106a 235439 Herc1 gaUGGACGUGACAAU-CGUGAAAc ||| ||| || | ||||||| cuACCCCCACAGUGAUGCACUUUc 2 22 2138 2161 [mm9:9:66354868-66354891:+] 0.5007 164 7 -19.36 -0.1138 MIMAT0000386 mmu-miR-106b 235439 Herc1 uagacGUGACAGU-CGUGAAAu ||| || | ||||||| accccCACAGUGAUGCACUUUc 2 17 2140 2161 [mm9:9:66354870-66354891:+] 0.5007 155 7 -12.67 -0.1138 MIMAT0000513 mmu-miR-19b 235439 Herc1 agucAAAAC--GUACC--UAAACGUGu ||||| || | |||||||| uucuUUUUGGUCAAAGAAAUUUGCACa 2 20 2931 2957 [mm9:9:66299361-66299387:+] 0.4045 153 7 -12.64 -0.3000 MIMAT0000518 mmu-miR-196a 235439 Herc1 ggGUUGUUGUACUUUGAUGGAu :|| || | ||:|||||| uuUAAAAAAAAAAAGCUACCUa 2 21 111 132 [mm9:9:66322848-66322869:+] 0.5125 148 6 -13.60 -0.1491 MIMAT0000521 mmu-let-7a 235439 Herc1 uuGAUAUGUUGGAUGAUGGAGu || | | |:|| ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 158 7 -19.56 -0.2211 MIMAT0000521 mmu-let-7a 235439 Herc1 uugauauguugGAUGAUGGAGu || ||||||| ugauccuucugCUUCUACCUCc 2 12 561 582 [mm9:9:66221142-66221163:+] 0.5012 147 7 -13.85 -0.3944 MIMAT0000522 mmu-let-7b 235439 Herc1 uuGGUGUGUUGGAUGAUGGAGu |: : | |:|| ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 150 7 -18.59 -0.2232 MIMAT0000522 mmu-let-7b 235439 Herc1 uugguguguugGAUGAUGGAGu || ||||||| ugauccuucugCUUCUACCUCc 2 12 561 582 [mm9:9:66221142-66221163:+] 0.5012 147 7 -15.94 -0.3975 MIMAT0000523 mmu-let-7c 235439 Herc1 uuGGUAUGUUGGAUGAUGGAGu |: | | |:|| ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 154 7 -18.59 -0.2211 MIMAT0000523 mmu-let-7c 235439 Herc1 uuGGUAUGUUGGAUGAUGGAGu :| | | :|:| ||||||| gaUCCUUCUGCUU-CUACCUCc 2 21 562 582 [mm9:9:66221143-66221163:+] 0.5012 150 7 -15.94 -0.3712 MIMAT0000524 mmu-let-7e 235439 Herc1 uuGAUAUGUUGGAGGAUGGAGu || | | |:|| ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 158 7 -19.56 -0.2211 MIMAT0000524 mmu-let-7e 235439 Herc1 uugauauguugGAGGAUGGAGu ||:||||||| ugauccuucugCUUCUACCUCc 2 12 561 582 [mm9:9:66221142-66221163:+] 0.5012 151 7 -16.98 -0.3944 MIMAT0000525 mmu-let-7f 235439 Herc1 uuGAUAUGUUAGAUGAUGGAGu || | | |||| ||||||| agCUUUCCUAUCU-CUACCUCg 2 21 2529 2549 [mm9:9:66298959-66298979:+] 0.7634 162 7 -19.83 -0.2191 MIMAT0000525 mmu-let-7f 235439 Herc1 uugauauguuaGAUGAUGGAGu || ||||||| ugauccuucugCUUCUACCUCc 2 12 561 582 [mm9:9:66221142-66221163:+] 0.5012 147 7 -13.76 -0.3975 MIMAT0000526 mmu-miR-15a 235439 Herc1 guGUUUGGU-AAUACACGACGAu | :|| : || ||||||||| gcCUGACAGCUUCUGUGCUGCUg 2 21 205 227 [mm9:9:66298599-66298621:+] 0.7209 159 7 -18.96 -0.3465 MIMAT0000526 mmu-miR-15a 235439 Herc1 guGUUUGG---UAAUACACGACGAu ||:||| : || ||||||| gaCAGACCCCGGGUAGAUGCUGCUa 2 21 519 543 [mm9:9:66353249-66353273:+] 0.5527 151 7 -21.84 -0.2432 MIMAT0000527 mmu-miR-16 235439 Herc1 gcGGUUAU-AAAUGCACGACGAu |::| | || :|||||||| gcCUGACAGCUUCUGUGCUGCUg 2 21 205 227 [mm9:9:66298599-66298621:+] 0.7209 155 7 -19.00 -0.3465 MIMAT0000527 mmu-miR-16 235439 Herc1 gcgguuauaaAUGCACGACGAu || ||||||| agaccccgggUAGAUGCUGCUa 2 13 522 543 [mm9:9:66353252-66353273:+] 0.5527 144 7 -17.47 -0.2476 MIMAT0000528 mmu-miR-18a 235439 Herc1 gaUAGACGUGAUCUACGUG-GAAu :|||| ||| ||||| ||| agGUCUG--GUAG-UGCACACUUu 2 22 3087 3107 [mm9:9:66299517-66299537:+] 0.5023 120 0 -16.74 -0.1240 MIMAT0000528 mmu-miR-18a 235439 Herc1 gaUAGACGUGAUCUACGU-GGAAu ||| || || |:|||| |||| gcAUC-GC-CU-GGUGCAGCCUUc 2 22 1133 1153 [mm9:9:66323870-66323890:+] 0.7160 123 0 -18.58 -0.2223 MIMAT0000529 mmu-miR-20a 235439 Herc1 gaUGGACGUGAUAUU-CGUGAAAu ||| ||| :|:| ||||||| cuACCCCCACAGUGAUGCACUUUc 2 22 2138 2161 [mm9:9:66354868-66354891:+] 0.5007 164 7 -20.06 -0.1150 MIMAT0000530 mmu-miR-21 235439 Herc1 aguUGUAGUCAG--ACUAUUCGAu || || |: | ||||||| uucACUUCUCUUCAUAAUAAGCUc 2 20 1210 1233 [mm9:9:66297640-66297663:+] 0.5280 146 7 -7.33 -0.1585 MIMAT0000530 mmu-miR-21 235439 Herc1 agUUGUAGUCAGA---C-UAUUCGau ||:||:| :| | |||||| ugAAUAUUAUAUUAAAGAAUAAGCau 3 21 1188 1213 [mm9:9:66221769-66221794:+] 0.5330 126 0 -6.42 -0.1310 MIMAT0000530 mmu-miR-21 235439 Herc1 aguuguAGUCAGACUAUUCGAu |:|| ||||||| gauguuUUAGGAACAUAAGCUg 2 17 83 104 [mm9:9:66356214-66356235:+] 0.5892 144 7 -10.89 -0.7464 MIMAT0000532 mmu-miR-23a 235439 Herc1 ccUUUAGGGAC---CGUUACACUa | ||:::|| :||||||| uuAUAUUUUUGUAAUUAAUGUGAc 2 20 1445 1468 [mm9:9:66297875-66297898:+] 0.5552 146 7 -11.90 -0.5928 MIMAT0000532 mmu-miR-23a 235439 Herc1 ccuuuagggaccgUUACACUa ||||||| ugccaaagaagaaAAUGUGAa 2 9 1044 1064 [mm9:9:66323781-66323801:+] 0.7160 140 7 -9.15 -1.1494 MIMAT0000535 mmu-miR-29a 235439 Herc1 auuggCUA-AAGUCUAC-CACGAu ||| | ||||| ||||| acgagGAUGUGGAGAUGCGUGCUg 2 18 2670 2693 [mm9:9:66299100-66299123:+] 0.7533 124 0 -19.32 -0.1378 MIMAT0000535 mmu-miR-29a 235439 Herc1 auUGGCUAAAGUCUACCACGAu ||:| | || |||||||| ucACUGCAUGCACAUGGUGCUc 2 21 906 927 [mm9:9:66221487-66221508:+] 0.5007 164 7 -18.14 -0.1978 MIMAT0000536 mmu-miR-29c 235439 Herc1 auuggCUA-AAGUUUAC-CACGAu ||| | |:||| ||||| acgagGAUGUGGAGAUGCGUGCUg 2 18 2670 2693 [mm9:9:66299100-66299123:+] 0.7533 120 0 -16.62 -0.1378 MIMAT0000536 mmu-miR-29c 235439 Herc1 auUGGCUAAAGUUUACCACGAu ||:| | || |||||||| ucACUGCAUGCACAUGGUGCUc 2 21 906 927 [mm9:9:66221487-66221508:+] 0.5007 164 7 -18.14 -0.1978 MIMAT0000537 mmu-miR-27a 235439 Herc1 cgccUUGAAUCGGUGACACUu || || :||||||| guauAAAGUAUGUACUGUGAa 2 18 930 950 [mm9:9:66323667-66323687:+] 0.4396 149 7 -12.68 -0.5685 MIMAT0000537 mmu-miR-27a 235439 Herc1 cgccuugaaucgguGACACUu |||||| augguuuuauuuuuCUGUGAu 2 8 155 175 [mm9:9:66356286-66356306:+] 0.5707 120 6 -13.37 -0.1157 MIMAT0000538 mmu-miR-31 235439 Herc1 gucGAUAC--GGU---CGUAGAACGGa ||||| ||| |: ||||||| aaaCUAUGCCCCACCUGUUUCUUGCCu 2 20 228 254 [mm9:9:66296658-66296684:+] 0.5068 153 7 -23.81 -0.4848 MIMAT0000540 mmu-miR-93 235439 Herc1 gaUGGACGUG-CUUGUCGUGAAAc ||| ||| | : ||||||| cuACCCCCACAGUGAUGCACUUUc 2 22 2138 2161 [mm9:9:66354868-66354891:+] 0.5007 152 7 -18.14 -0.1150 MIMAT0000541 mmu-miR-96 235439 Herc1 ucguuuuUACACGAUCACGGUUu ||| | ||||||| uauucucAUG-ACAUGUGCCAAa 2 17 1029 1050 [mm9:9:66323766-66323787:+] 0.7160 142 7 -13.60 -1.0984 MIMAT0000542 mmu-miR-34a 235439 Herc1 uguuggucgauucUGUGACGGu |||||||| uucuuuagaaccaACACUGCCa 2 10 443 464 [mm9:9:66298837-66298858:+] 0.6326 145 7 -20.13 -1.1481 MIMAT0000542 mmu-miR-34a 235439 Herc1 ugUUGGUCGAUUCUGU-GACGGu || || |: ||| ||||| caAAGAAGGCAGCACAUCUGCCa 2 21 83 105 [mm9:9:66296283-66296305:+] 0.8042 120 0 -18.59 -0.4754 MIMAT0000542 mmu-miR-34a 235439 Herc1 uguuggucgauucUGUGACGGu |||||||| uucuuuagaaccaACACUGCCa 2 10 2407 2428 [mm9:9:66298837-66298858:+] 0.6326 145 7 -20.13 -0.6354 MIMAT0000542 mmu-miR-34a 235439 Herc1 uguuGGUCGAUUCUGUGACGGu |:||| ||| ||||||| gggcCUAGC-AAG-CACUGCCc 2 19 645 664 [mm9:9:66353375-66353394:+] 0.5367 158 7 -22.13 -0.1750 MIMAT0000545 mmu-miR-98 235439 Herc1 uuguuAUGUUGAAUGAUGGAGu | | :||| ||||||| gauccUUCUGCUU-CUACCUCc 2 18 562 582 [mm9:9:66221143-66221163:+] 0.5012 151 7 -13.51 -0.3712 MIMAT0000546 mmu-miR-103 235439 Herc1 aguaUCGGGACAUGUUACGACGa | |||| :|||||||| ucucAACCCU-CCUAAUGCUGCg 2 20 964 985 [mm9:9:66353694-66353715:+] 0.4881 153 7 -20.11 -0.2000 MIMAT0000548 mmu-miR-322 235439 Herc1 aggUUUUGUACUUAACGACGAc | |:| | : ||||||| cugACAGCUUCUG-UGCUGCUg 2 20 207 227 [mm9:9:66298601-66298621:+] 0.7209 141 7 -16.71 -0.3252 MIMAT0000548 mmu-miR-322 235439 Herc1 agGUUUUGUACUUA---ACGACGAc ||:| | |::| ||||||| gaCAGACCCCGGGUAGAUGCUGCUa 2 21 519 543 [mm9:9:66353249-66353273:+] 0.5527 147 7 -14.98 -0.2454 MIMAT0000555 mmu-miR-324-5p 235439 Herc1 ugUGGUUACGGGAUCCCCUACGc ||:: ||: || ||||||| ggACUGCUGUGCUCUGGGAUGCu 2 22 1237 1259 [mm9:9:66353967-66353989:+] 0.5520 161 7 -20.91 -0.1647 MIMAT0000565 mmu-miR-328 235439 Herc1 ugCCUUCC-CG---UCUCUCCCGGUc |||||| |: || ||||||| aaGGAAGGAGUUCAAGUUAGGGCCAg 2 21 1845 1870 [mm9:9:66354575-66354600:+] 0.5007 154 7 -30.53 -0.1903 MIMAT0000567 mmu-miR-329 235439 Herc1 uuUUUCCA-AUCGACCCACACAa |:|| | || | ||||||| uuAGAGUUGGAGGUCGGUGUGUu 2 21 19 41 [mm9:9:66296219-66296241:+] 0.8042 155 7 -19.36 -0.4629 MIMAT0000582 mmu-miR-338-3p 235439 Herc1 guuguUUUAGUGACUACGACCu :|: ::||||||||| -----GAGGAGUUGAUGCUGGu 2 18 1 17 [mm9:9:66296201-66296217:+] 0.8042 153 7 -19.02 -0.9497 MIMAT0000584 mmu-miR-339-5p 235439 Herc1 gcacucgaggaccucCUGUCCcu |||||| ggaccuaacauaucuGACAGGca 3 9 227 249 [mm9:9:66298621-66298643:+] 0.7209 120 0 -10.24 -0.1668 MIMAT0004651 mmu-miR-340-5p 235439 Herc1 uuaGUCAGAGUAACGAA-AUAUu || | | ||| ||| |||| accCAAUAUAAUU-CUUAUAUAu 2 20 1053 1074 [mm9:9:66297483-66297504:+] 0.5407 121 0 -1.69 -0.5124 MIMAT0000612 mmu-miR-135b 235439 Herc1 aguguauccuuacUUUUCGGUAu |:||||||| ccugcccucuaaaAGAAGCCAUu 2 11 2317 2339 [mm9:9:66355047-66355069:+] 0.5108 146 7 -11.07 -0.3316 MIMAT0000616 mmu-miR-101b 235439 Herc1 aagUCG-AUAGUGU-CAUGACAu ||: || ::| ||||||| augAGUAUAAAGUAUGUACUGUg 2 19 926 948 [mm9:9:66323663-66323685:+] 0.4917 144 7 -13.05 -0.5758 MIMAT0000647 mmu-miR-107 235439 Herc1 acuaUCGGGACAUGUUACGACGa | |||| :|||||||| ucucAACCCU-CCUAAUGCUGCg 2 20 964 985 [mm9:9:66353694-66353715:+] 0.4881 153 7 -20.11 -0.2000 MIMAT0000648 mmu-miR-10a 235439 Herc1 guGUUUAAGCCUAGA----UGUCCCAu | | ||: ||| | ||||||| auCCAUUUUAGAUGUGCGAACAGGGUu 2 22 350 376 [mm9:9:66298744-66298770:+] 0.7209 148 7 -15.56 -1.0678 MIMAT0000648 mmu-miR-10a 235439 Herc1 guGUUUAAGCCUAGA----UGUCCCAu | | ||: ||| | ||||||| auCCAUUUUAGAUGUGCGAACAGGGUu 2 22 2314 2340 [mm9:9:66298744-66298770:+] 0.7209 148 7 -15.56 -0.3899 MIMAT0000649 mmu-miR-17 235439 Herc1 gaUGGACGUGACAUU-CGUGAAAc ||| ||| ||:| ||||||| cuACCCCCACAGUGAUGCACUUUc 2 22 2138 2161 [mm9:9:66354868-66354891:+] 0.5007 168 7 -21.38 -0.1138 MIMAT0000651 mmu-miR-19a 235439 Herc1 agucAAAAC--GUAUC--UAAACGUGu ||||| || || |||||||| uucuUUUUGGUCAAAGAAAUUUGCACa 2 20 2931 2957 [mm9:9:66299361-66299387:+] 0.4045 161 7 -13.79 -0.3000 MIMAT0000653 mmu-miR-28 235439 Herc1 gaGUUAUCUGACACUCGAGGaa ||: : || |||||| guCAGGGUACCACAAGCUCCaa 3 21 397 418 [mm9:9:66298791-66298812:+] 0.7067 124 0 -13.01 -0.2305 MIMAT0000656 mmu-miR-139-5p 235439 Herc1 gaccucUGUGCACGUGACAUCu |:| | |||||||| uuuauuAUAAAUACACUGUAGc 2 17 299 320 [mm9:9:66220880-66220901:+] 0.4815 152 7 -13.29 -0.2550 MIMAT0000657 mmu-miR-200c 235439 Herc1 agguAGUAAUGGGCCGUCAUAAu ||| | || ||||||| agguUCAGUUCC---CAGUAUUu 2 20 386 405 [mm9:9:66323123-66323142:+] 0.5004 147 7 -11.93 -0.1840 MIMAT0000662 mmu-miR-216a 235439 Herc1 agugucaacgguCGACUCUAAu | ||||||| ggcuaaucuauuGAUGAGAUUu 2 11 303 324 [mm9:9:66296733-66296754:+] 0.5128 142 7 -9.15 -0.2558 MIMAT0000663 mmu-miR-218 235439 Herc1 uguaccaaUC-UAGUUCG-UGUu || ||||||| ||| ggaaacagAGCAUCAAGCGACAu 2 14 265 287 [mm9:9:66298659-66298681:+] 0.7209 120 0 -13.72 -0.7544 MIMAT0000663 mmu-miR-218 235439 Herc1 uguaccaaUC-UAGUUCG-UGUu || ||||||| ||| ggaaacagAGCAUCAAGCGACAu 2 14 2229 2251 [mm9:9:66298659-66298681:+] 0.7209 120 0 -13.72 -0.1658 MIMAT0000663 mmu-miR-218 235439 Herc1 ugUACCAAUC-UAG--UUCGUGUu | | |||| ||| ||||||| acAAGCUUAGAAUCUGAAGCACAc 2 20 419 442 [mm9:9:66353149-66353172:+] 0.5527 157 7 -13.29 -0.1671 MIMAT0000665 mmu-miR-223 235439 Herc1 accccauaaacUGUUUGACUGu ::|||||||| ccccugccucaGUAAACUGACu 2 12 1446 1467 [mm9:9:66354176-66354197:+] 0.5366 147 7 -11.28 -0.1844 MIMAT0000666 mmu-miR-320 235439 Herc1 agcGGGA--GAGUUGGGUCGAAAa |||| ||: :|:||||||| agaCCCUGGCUUUGCUCAGCUUUa 2 20 3380 3403 [mm9:9:66299810-66299833:+] 0.5269 162 7 -22.05 -0.2461 MIMAT0000666 mmu-miR-320 235439 Herc1 agcgggagAGUUGGGUCGAAAa |: |:::|||||| acuuaacaUUUAUUUAGCUUUa 2 15 777 798 [mm9:9:66323514-66323535:+] 0.5360 134 6 -11.80 -0.1239 MIMAT0000666 mmu-miR-320 235439 Herc1 agcgggagaguuggGUCGAAAa |||:||| uucauuagaaaggaCAGUUUUa 2 9 340 361 [mm9:9:66356471-66356492:+] 0.7525 124 0 -8.30 -0.1336 MIMAT0000667 mmu-miR-33 235439 Herc1 acGUUACGUU-GAU-GUUACGUg :| | :|: ||| ||||||| gaUAUUCUAGUCUAUCAAUGCAc 2 20 792 814 [mm9:9:66297222-66297244:+] 0.5448 149 7 -14.08 -0.4296 MIMAT0000667 mmu-miR-33 235439 Herc1 acguuacguugaUGUUACGUg |||||||| uuauuaguuggaACAAUGCAu 2 10 1158 1178 [mm9:9:66297588-66297608:+] 0.5280 145 7 -11.03 -0.3401 MIMAT0000667 mmu-miR-33 235439 Herc1 acgUUA-CGUUGAUGUUACGUg ||| :||:| :|||||| uaaAAUCUUAAUUUUAAUGCAa 2 19 876 897 [mm9:9:66323613-66323634:+] 0.5619 141 6 -10.16 -0.1554 MIMAT0000667 mmu-miR-33 235439 Herc1 acGUUACGU--UG-AUGU-UACGUg ::|| || || |||| ||||| aaUGAUUCAGUACGUACACAUGCAa 2 20 704 728 [mm9:9:66323441-66323465:+] 0.5285 121 0 -11.91 -0.7834 MIMAT0000668 mmu-miR-211 235439 Herc1 uccgUUUC-CUACUGUUUCCCUu |||| :||:|||||||| aaagAAAGAUGUGGCAAAGGGAa 2 19 1361 1383 [mm9:9:66297791-66297813:+] 0.5144 165 7 -22.14 -0.2089 MIMAT0000669 mmu-miR-221 235439 Herc1 cuuugggucguCUGUUACAUCGa ||: ||||||| gccucaaacuuGAU-AUGUAGCu 2 13 520 541 [mm9:9:66221101-66221122:+] 0.5012 142 7 -15.68 -0.3084 MIMAT0000670 mmu-miR-222 235439 Herc1 ugggucaucggUCUACAUCGa | ||||||| ccucaaacuugAUAUGUAGCu 2 11 521 541 [mm9:9:66221102-66221122:+] 0.5012 142 7 -12.93 -0.3263 MIMAT0000679 mmu-miR-217 235439 Herc1 agGUCAGUCAAGGAC---------UACGUCAu :||||||| :||| ||||||| aaUAGUCAGUAUCUGCUAAUAUGUAUGCAGUa 2 22 1301 1332 [mm9:9:66297731-66297762:+] 0.5250 148 7 -27.37 -0.5487 MIMAT0000679 mmu-miR-217 235439 Herc1 agGUCAGUCAAGGACUAC-GUCAu || || | | ||||| |||| uuCAUUCUG-UAAUGAUGUCAGUu 2 22 1934 1956 [mm9:9:66298364-66298386:+] 0.4881 123 0 -15.81 -0.3214 MIMAT0000679 mmu-miR-217 235439 Herc1 aggucagUCAAGG-ACUACGUCAu :| ||| |||||||| agggaaaGGAUCCAAGAUGCAGUu 2 17 1155 1178 [mm9:9:66323892-66323915:+] 0.7160 151 7 -17.01 -0.4948 MIMAT0000679 mmu-miR-217 235439 Herc1 agGUCAGUCAAGGACUA-CGUCAu |||| | ||: | || ||||| ccCAGU-A-UUUAUUAUGGCAGUu 2 22 396 417 [mm9:9:66323133-66323154:+] 0.5004 121 0 -14.94 -0.3636 MIMAT0000704 mmu-miR-361 235439 Herc1 cauggggACCUCUA-AGACUAUu || | || ||||||| aucauaaUGUAAAUAUCUGAUAu 2 16 1071 1093 [mm9:9:66353801-66353823:+] 0.5007 150 7 -7.96 -0.5486 MIMAT0000704 mmu-miR-361 235439 Herc1 cauggggaccucuaaGACUAUu |||||| uuuuaggaacauaagCUGAUAc 2 8 87 108 [mm9:9:66356218-66356239:+] 0.5892 120 6 -8.19 -0.1122 MIMAT0004684 mmu-miR-362-3p 235439 Herc1 acuuaggAACUU--GUCCACACAa |||:| : ||||||| cuuagagUUGGAGGUCGGUGUGUu 2 16 18 41 [mm9:9:66296218-66296241:+] 0.8042 146 7 -17.47 -0.4563 MIMAT0003151 mmu-miR-378 235439 Herc1 ggaAGACUGAGGU----UCAGGUCa || || :|| ||||||| cagUCAGAAAUCAGAGCAGUCCAGc 2 19 2507 2531 [mm9:9:66298937-66298961:+] 0.7634 141 7 -14.85 -0.1683 MIMAT0003151 mmu-miR-378 235439 Herc1 ggaAGAC--UGAGGUUCA-GGUCa |||| :|||| ||| |||| ccaUCUGUUGCUCC-AGUCCCAGc 2 19 423 445 [mm9:9:66323160-66323182:+] 0.5007 123 0 -23.22 -0.1187 MIMAT0003151 mmu-miR-378 235439 Herc1 ggaagacUGAGGUUCAGGUCa |:| | ||||||| agcacacAUUGC-AGUCCAGa 2 15 436 455 [mm9:9:66353166-66353185:+] 0.5527 144 7 -13.50 -0.2579 MIMAT0000746 mmu-miR-381 235439 Herc1 ugucUCUCGAACGGGAA-CAUAu ||| :|| | ||| |||| uuuuAGAUUUUUCACUUGGUAUg 2 19 1348 1370 [mm9:9:66324085-66324107:+] 0.2926 126 0 -9.14 -0.1473 MIMAT0000746 mmu-miR-381 235439 Herc1 ugUCUCUCGAACGGGA-ACAUAu || || || :||| ||||| ucAGUCAGGUUUUCCUCUGUAUu 2 21 202 224 [mm9:9:66356333-66356355:+] 0.5522 128 0 -16.76 -0.7240 MIMAT0000748 mmu-miR-383 235439 Herc1 ucgguGUCAGUGGAAGACUAGa | || | |||||||| uuuucCUGUGUCAUUCUGAUCu 2 18 2049 2070 [mm9:9:66298479-66298500:+] 0.7209 153 7 -19.67 -0.7665 MIMAT0000766 mmu-miR-335-5p 235439 Herc1 uguaaaaagcaauaaCGAGAACu ||||||| uaguaaauaugcugaGCUCUUGc 2 9 2584 2606 [mm9:9:66299014-66299036:+] 0.7634 140 7 -12.99 -0.2869 MIMAT0000766 mmu-miR-335-5p 235439 Herc1 ugUAAAAAGCAAUAACGAGAACu || || ||:| ||||||| uaAUAAUU--UUGUGGCUCUUGu 2 22 29 49 [mm9:9:66220610-66220630:+] 0.5011 154 7 -16.25 -0.5372 MIMAT0001076 mmu-miR-384-3p 235439 Herc1 uaacacuUGU-UA-AAGAUCCUUa |:| || ||:|||||| uaacuacAUAGAUGUUUUAGGAAc 2 16 73 96 [mm9:9:66356204-66356227:+] 0.5767 137 6 -9.91 -0.1114 MIMAT0001081 mmu-miR-196b 235439 Herc1 ggGUUGUUGUCCUUUGAUGGAu :|| || | ||:|||||| uuUAAAAAAAAAAAGCUACCUa 2 21 111 132 [mm9:9:66322848-66322869:+] 0.5125 148 6 -13.85 -0.1491 MIMAT0001091 mmu-miR-410 235439 Herc1 uguccgGUAGACACA-AUAUAa ::| ||||| ||||| uaaaugUGUGUGUGUGUAUAUa 2 16 877 898 [mm9:9:66297307-66297328:+] 0.5132 123 0 -8.25 -0.4782 MIMAT0001091 mmu-miR-410 235439 Herc1 uguccgguagacacAAUAUAa |||||| cauaaccuugaauaUUAUAUu 2 8 1180 1200 [mm9:9:66221761-66221781:+] 0.5330 120 6 -5.32 -0.1059 MIMAT0001091 mmu-miR-410 235439 Herc1 uguccgguagacacAAUAUAa |||||| uauauuuucauaauUUAUAUa 2 8 756 776 [mm9:9:66323493-66323513:+] 0.5364 120 6 -3.32 -0.1822 MIMAT0001091 mmu-miR-410 235439 Herc1 ugUCCGGU-AGACACAAU-AUAa ||| | ||| ||||| ||| uaAGGAAACUCU-UGUUAGUAUg 2 20 987 1008 [mm9:9:66323724-66323745:+] 0.5517 120 0 -9.43 -0.4775 MIMAT0001091 mmu-miR-410 235439 Herc1 ugUCCGGU-AGACACAAUAUAa | ||:| | | ||||||| ccAAGCUAGCCAGAGUUAUAUa 2 20 2464 2485 [mm9:9:66355194-66355215:+] 0.5006 150 7 -10.51 -0.2447 MIMAT0004750 mmu-miR-425 235439 Herc1 aguugcccucacuaGCACAGUAa :||||||| cacuugcuuuuuccUGUGUCAUu 2 10 2041 2063 [mm9:9:66298471-66298493:+] 0.7209 141 7 -11.32 -0.4078 MIMAT0001420 mmu-miR-433 235439 Herc1 ugUGGCUCCUCGGGUAGU-ACUa :| ||| |||||| ||| aaGCAGAGAUUACCAUCAGUGAu 2 21 121 143 [mm9:9:66296321-66296339,66298534-66298537:+] 0.7626 120 0 -16.45 -1.0040 MIMAT0001420 mmu-miR-433 235439 Herc1 uguggcuccucgggUAGUACUa ||||||| aggaaagagaaaaaAUCAUGAa 2 9 2458 2479 [mm9:9:66298888-66298909:+] 0.6681 140 7 -11.51 -0.9682 MIMAT0001533 mmu-miR-448 235439 Herc1 uacccUGUAGGAUGUAUACGUu |:|| ||: ||||||| uguaaAUAU-CUG-AUAUGCAg 2 18 1078 1097 [mm9:9:66353808-66353827:+] 0.5007 149 7 -13.66 -0.2941 MIMAT0001537 mmu-miR-429 235439 Herc1 ugccguAAUGGUCUGUC-AUAAu ||| | |||| |||| uaccuuUUAAAACACAGAUAUUc 2 17 776 798 [mm9:9:66297206-66297228:+] 0.5256 120 0 -5.96 -0.2034 MIMAT0001537 mmu-miR-429 235439 Herc1 ugccGUAAUGGUCUGUCAUAAu || | || ||||||| gguuCAGUUCC---CAGUAUUu 2 19 387 405 [mm9:9:66323124-66323142:+] 0.5004 142 7 -11.78 -0.1840 MIMAT0001542 mmu-miR-449a 235439 Herc1 uggucgaUUGUUAUGUGACGGu ||| | |||||||| ucuuuagAACCA-ACACUGCCa 2 16 444 464 [mm9:9:66298838-66298858:+] 0.6326 153 7 -18.50 -1.1461 MIMAT0001542 mmu-miR-449a 235439 Herc1 uggUCGAUUGUUAUGU-GACGGu || ::||: ||| ||||| caaAGAAGGCAGCACAUCUGCCa 2 20 83 105 [mm9:9:66296283-66296305:+] 0.8042 123 0 -19.53 -0.4822 MIMAT0001542 mmu-miR-449a 235439 Herc1 uggucgaUUGUUAUGUGACGGu ||| | |||||||| ucuuuagAACCA-ACACUGCCa 2 16 2408 2428 [mm9:9:66298838-66298858:+] 0.6326 153 7 -18.50 -0.6317 MIMAT0001542 mmu-miR-449a 235439 Herc1 uggucGAUUGUUAUGUGACGGu |||:||| :||||||| ugggcCUAGCAA-GCACUGCCc 2 18 644 664 [mm9:9:66353374-66353394:+] 0.5367 163 7 -21.48 -0.1865 MIMAT0003112 mmu-miR-489 235439 Herc1 cgACGGUAUAUACACCACAGUAa ||| | | | ||||||| cuUGC--UUUUUCCUGUGUCAUu 2 22 2043 2063 [mm9:9:66298473-66298493:+] 0.7209 142 7 -13.05 -0.4016 MIMAT0003112 mmu-miR-489 235439 Herc1 cgacggUAUA--UACACCACAG-UAa |||| || | ||||| || ccaauaAUAUUGAUUUAGUGUCUAUu 2 18 1263 1288 [mm9:9:66324000-66324025:+] 0.4612 120 0 -7.98 -0.5622 MIMAT0003169 mmu-miR-539 235439 Herc1 ugugugguuccuauuAAAGAGg |||||| gugcugucacccaccUUUCUCa 2 8 10 31 [mm9:9:66356141-66356162:+] 0.4660 120 6 -11.21 -0.1262 MIMAT0003172 mmu-miR-542-3p 235439 Herc1 aaaGUCAAUAGUUA-GACAGUGu | | |: ::| ||||||| ---CUGAUGAGGGUGCUGUCACc 2 20 1 20 [mm9:9:66356132-66356151:+] 0.3678 142 7 -11.87 -0.1319 MIMAT0003182 mmu-miR-494 235439 Herc1 cuccAAAGGGCA-CAUACAA-AGu |||| | | ||||||| || gauuUUUCACUUGGUAUGUUCUCc 2 19 1353 1376 [mm9:9:66324090-66324113:+] 0.2926 129 0 -12.21 -0.4291 MIMAT0003187 mmu-miR-20b 235439 Herc1 gaUGGACGUGAUACU-CGUGAAAc ||| ||| :||| ||||||| cuACCCCCACAGUGAUGCACUUUc 2 22 2138 2161 [mm9:9:66354868-66354891:+] 0.5007 168 7 -22.41 -0.1150 MIMAT0003188 mmu-miR-503 235439 Herc1 gacgUCAUGACAAGG-GCGACGAu :| :| | || ||||||| acugGGCGCCAUGCCACGCUGCUg 2 20 51 74 [mm9:9:66296251-66296274:+] 0.8042 146 7 -22.87 -0.3687 MIMAT0003377 mmu-miR-302d 235439 Herc1 uguGAGUU-UG-UACCUUC-GUGAAu |||:: :| || |||| ||||| uacCUCGGUGCUAU-GAAGUCACUUa 2 21 2543 2567 [mm9:9:66298973-66298997:+] 0.7634 120 0 -18.74 -0.2956 MIMAT0003727 mmu-miR-374 235439 Herc1 guGAAUCGUCC--AACAUAAUAUa |||: :|| || ||||||| uaCUUGUGGGGCUUUUUAUUAUAu 2 21 1427 1450 [mm9:9:66297857-66297880:+] 0.5552 155 7 -12.89 -0.3769 MIMAT0003727 mmu-miR-374 235439 Herc1 guGAAUC-GUCCAACAUA-AUAUa | ||| ||| ||||| |||| uuCAUAGACAG--UGUAUAUAUAa 2 21 3356 3377 [mm9:9:66299786-66299807:+] 0.5269 124 0 -9.15 -0.3465 MIMAT0003727 mmu-miR-374 235439 Herc1 gugaAUCGUCCAACAUAA-UAUa ||| :|||| |||| ||| gaaaUAG-GGGUU-UAUUGAUAa 2 19 1009 1029 [mm9:9:66297439-66297459:+] 0.5511 122 0 -8.13 -0.8558 MIMAT0003727 mmu-miR-374 235439 Herc1 guGAAUCGUCCAAC--AUAAUAUa :| | | ||| ||||||| cuUUCAUAACCUUGAAUAUUAUAu 2 21 1176 1199 [mm9:9:66221757-66221780:+] 0.5330 143 7 -4.41 -1.0944 MIMAT0003727 mmu-miR-374 235439 Herc1 gugaaucguccaACAUAAUAUa | ||||||| uuuauuuauuuaUUUAUUAUAa 2 11 287 308 [mm9:9:66220868-66220889:+] 0.4815 142 7 -3.28 -1.2314 MIMAT0003727 mmu-miR-374 235439 Herc1 gugaaucguccaacaUAAUAUa |||||| uuugcauaaauuaaaAUUAUAa 2 8 526 547 [mm9:9:66323263-66323284:+] 0.4987 120 6 -1.48 -0.2365 MIMAT0003729 mmu-miR-216b 235439 Herc1 aguguaaacggaCGUCUCUAAa ||||||||| cagugggaugaaGCAGAGAUUa 2 11 111 132 [mm9:9:66296311-66296332:+] 0.8042 150 7 -13.63 -1.0307 MIMAT0003729 mmu-miR-216b 235439 Herc1 aguguaaacGGACG-UCUCUAAa |:||: ||||||| uuuguggcuCUUGUAAGAGAUUu 2 14 36 58 [mm9:9:66220617-66220639:+] 0.5073 148 7 -14.44 -0.3042 MIMAT0003730 mmu-miR-592 235439 Herc1 uguaguagCGUAUAACUGUGUUa ||| | |||||||| ccacccagGCA-AGUGACACAAa 2 16 244 265 [mm9:9:66322981-66323002:+] 0.5355 153 7 -14.30 -0.4865 MIMAT0003738 mmu-miR-496 235439 Herc1 cuCUAACCGGUA--CAUUAUGAGu |||| |||| ||:|||||| gaGAUU-ACCAUCAGUGAUACUCc 2 21 126 148 [mm9:9:66296326-66296339,66298534-66298542:+] 0.7626 149 6 -20.84 -0.1685 MIMAT0003738 mmu-miR-496 235439 Herc1 cucUAACCGGUACAUUAUGAGu :|| |||| ||||:|| acaGUUUUACAUG-AAUAUUCa 2 20 353 373 [mm9:9:66356484-66356504:+] 0.7525 137 0 -13.00 -0.1243 MIMAT0003453 mmu-miR-497 235439 Herc1 augUUUGG--UGUC----ACACGACGAc |::|| |||| ||||||||| ccgAGGCCUGACAGCUUCUGUGCUGCUg 2 20 200 227 [mm9:9:66298594-66298621:+] 0.7209 153 7 -26.30 -0.3465 MIMAT0003453 mmu-miR-497 235439 Herc1 auGUUUGGUG-UCA-C-ACGACGAc ||:||| | :|| | ||||||| gaCAGACCCCGGGUAGAUGCUGCUa 2 21 519 543 [mm9:9:66353249-66353273:+] 0.5527 157 7 -23.73 -0.2432 MIMAT0003456 mmu-miR-495 235439 Herc1 uucuucacguggUACAAACAAa ||||||||| auuuauuaugggAUGUUUGUUc 2 11 1803 1824 [mm9:9:66298233-66298254:+] 0.5528 150 7 -8.86 -0.1359 MIMAT0003456 mmu-miR-495 235439 Herc1 uucUUCACGUGGUAC-AAACAAa || | :|: :|| |||||| uauAAUUCUAUAGUGAUUUGUUa 2 20 2899 2921 [mm9:9:66299329-66299351:+] 0.3814 123 6 -5.44 -0.3743 MIMAT0003456 mmu-miR-495 235439 Herc1 uuCUUC--ACGUGGUACAAACAAa |||| ||:| : ||||||| caGAAGUCUGUAAAGAGUUUGUUg 2 21 1130 1153 [mm9:9:66221711-66221734:+] 0.5330 155 7 -13.86 -0.4301 MIMAT0003456 mmu-miR-495 235439 Herc1 uucuucacgugguacAAACAAa |||||| uauucauauauuuauUUUGUUu 2 8 368 389 [mm9:9:66356499-66356520:+] 0.6694 120 6 -4.93 -0.2778 MIMAT0003460 mmu-miR-449c 235439 Herc1 ggucgaUCGUUACGUGACGGa | ||| ||||||| uuuagaACCAA--CACUGCCa 2 16 446 464 [mm9:9:66298840-66298858:+] 0.5729 144 7 -14.60 -1.0454 MIMAT0003460 mmu-miR-449c 235439 Herc1 ggucgaUCGUUACGUGACGGa | ||| ||||||| uuuagaACCAA--CACUGCCa 2 16 2410 2428 [mm9:9:66298840-66298858:+] 0.5729 144 7 -14.60 -0.4788 MIMAT0003460 mmu-miR-449c 235439 Herc1 ggucGAUCGUUACGUGACGGa ||||||| |||||||| gggcCUAGCAA-GCACUGCCc 2 18 645 664 [mm9:9:66353375-66353394:+] 0.5367 171 7 -26.37 -0.1830 MIMAT0003475 mmu-miR-146b 235439 Herc1 ucgGAUACCUUAAGUCAAGAGu ||:|| | ||||||| agaCUGUGCA----AGUUCUCc 2 20 2644 2661 [mm9:9:66299074-66299091:+] 0.7495 142 7 -14.08 -0.1239 MIMAT0003475 mmu-miR-146b 235439 Herc1 ucggauaccuuaagUCAAGAGu ||||||| uugcugaucccaaaAGUUCUCg 2 9 2603 2624 [mm9:9:66299033-66299054:+] 0.7545 140 7 -13.76 -0.2786 MIMAT0003482 mmu-miR-499 235439 Herc1 uuUGUAGUGACGUUCA-GAAUu :||| ||| : ||| |||| ugGCAU-ACUCUCAGUACUUAg 2 20 2384 2404 [mm9:9:66355114-66355134:+] 0.5006 121 0 -10.37 -0.1107 MIMAT0004828 mmu-miR-708 235439 Herc1 gggucgaucuaacaUUCGAGGaa ||||||| agucaggguaccacAAGCUCCaa 3 10 396 418 [mm9:9:66298790-66298812:+] 0.7067 125 0 -13.55 -0.2326 MIMAT0004324 mmu-miR-181d 235439 Herc1 ugggUGGCUGUUGUUACUU-ACAa |:: |||| | |||| ||| aagaAUUUACAAGACUGAACUGUa 2 20 1230 1253 [mm9:9:66221811-66221834:+] 0.5232 127 0 -9.25 -1.1653 MIMAT0004324 mmu-miR-181d 235439 Herc1 ugGGUGGCUGUUGUU--ACUUACAa ||| |:|| || ||||| | aaCCAAGAAUAAAAAUUUGAAUUUu 2 22 1265 1289 [mm9:9:66221846-66221870:+] 0.5134 124 0 -9.21 -0.1171 MIMAT0004847 mmu-miR-882 235439 Herc1 ugAUUACGCGAUUGAGAGAGGa |: || || | ||||||| acUGCUGAGCCA--UCUCUCCa 2 21 432 451 [mm9:9:66221013-66221032:+] 0.5006 149 7 -17.86 -0.2275 MIMAT0004847 mmu-miR-882 235439 Herc1 ugauuACGCGAUUGAGAGAGGa | | || |||||||| acacuUACAGUAUCUCUCUCCu 2 18 762 783 [mm9:9:66353492-66353513:+] 0.5135 153 7 -18.33 -0.1340 MIMAT0004847 mmu-miR-882 235439 Herc1 ugauuACGCGAUUGAGAGAGGa ||| ||: ||||||| gcuucUGC-CUG--UCUCUCCa 2 18 561 579 [mm9:9:66353291-66353309:+] 0.4932 144 7 -19.00 -0.1051 MIMAT0004852 mmu-miR-190b 235439 Herc1 uuggguuaUAGUUUGUAUAGu | | |||||||| gcugcuggACCUAACAUAUCu 2 14 221 241 [mm9:9:66298615-66298635:+] 0.7209 149 7 -11.04 -0.8509 MIMAT0004852 mmu-miR-190b 235439 Herc1 uugggUUA-UAGUU-UGUAUAGu ||| || || ||||||| gaaaaAAUCAUGAACACAUAUCc 2 17 2466 2488 [mm9:9:66298896-66298918:+] 0.7634 154 7 -8.30 -0.3486 MIMAT0004852 mmu-miR-190b 235439 Herc1 uuggguuaUAGUUUGUAUAGu | | |||||||| gcugcuggACCUAACAUAUCu 2 14 2185 2205 [mm9:9:66298615-66298635:+] 0.7209 149 7 -11.04 -0.2129 MIMAT0004852 mmu-miR-190b 235439 Herc1 uuGGGUUAUAGUUUGU-AUAGu ||||| | | ||| |||| ggCCCAACA-CUUACAGUAUCu 2 20 756 776 [mm9:9:66353486-66353506:+] 0.5135 121 0 -12.95 -0.1402 MIMAT0004855 mmu-miR-876-3p 235439 Herc1 acuuaaUGAAACAUUUGGUGAu || |||:||||||| ccuggaACCCUGUGAACCACUg 2 17 158 179 [mm9:9:66298552-66298573:+] 0.7209 160 7 -19.78 -0.5133 MIMAT0004858 mmu-miR-18b 235439 Herc1 gaUUGUCGUGAUC--UACGUG-GAAu ||:|| ||:| :||||| ||| aaAAUAGGUCUGGUAGUGCACACUUu 2 22 3082 3107 [mm9:9:66299512-66299537:+] 0.5003 128 0 -18.01 -0.1226 MIMAT0004858 mmu-miR-18b 235439 Herc1 gaUUGUCGUGAUCUACGU-GGAAu ::|| |:| |:|||| |||| auGGCAUCGCCUGGUGCAGCCUUc 2 22 1130 1153 [mm9:9:66323867-66323890:+] 0.7160 129 0 -20.87 -0.2223 MIMAT0004889 mmu-miR-504 235439 Herc1 cuAUCU-CACGUCUGGUCCCAGa |||| |||| || ||||||: uuUAGAUGUGC-GAACAGGGUUa 2 21 356 377 [mm9:9:66298750-66298771:+] 0.7209 153 0 -21.98 -0.1234 MIMAT0004895 mmu-miR-590-5p 235439 Herc1 gacGUGAA---AA-UACUUAUUCGAg ||||| || || |||||||| cuuCACUUCUCUUCAU-AAUAAGCUc 2 20 1209 1233 [mm9:9:66297639-66297663:+] 0.5280 155 7 -15.27 -0.1569 MIMAT0004895 mmu-miR-590-5p 235439 Herc1 gacGUGAAAAUACUUAUUCGag :|: || | |||||||| uauUAUAUUAAAGAAUAAGCau 3 20 1192 1213 [mm9:9:66221773-66221794:+] 0.5330 143 0 -8.78 -0.1285 MIMAT0004895 mmu-miR-590-5p 235439 Herc1 gacgugAAAAUACU--UAUUCGAg ||||| || ||||||| uagaugUUUUAGGAACAUAAGCUg 2 17 81 104 [mm9:9:66356212-66356235:+] 0.5892 159 7 -8.20 -0.7464 MIMAT0004895 mmu-miR-590-5p 235439 Herc1 gacGUGAAAAUACUUAUU-CGAg ||| ||| | ||||| ||| accCACCUUUCUCAAUAAUGCUc 2 20 18 40 [mm9:9:66356149-66356171:+] 0.4660 135 0 -10.54 -0.9015 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaUCGAAUAUGUAUU-UUAAu :|:|||| |||| |||| aggGGUUUAUUGAUAAUAAUUa 2 19 1014 1035 [mm9:9:66297444-66297465:+] 0.5407 130 0 -8.41 -0.9957 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaUCGAAUAU-GUAUUUUAau | :||: | : |||||| aaaAAUUUGAAUUUUAAAAUau 3 19 1275 1296 [mm9:9:66221856-66221877:+] 0.5134 125 0 -1.42 -0.2761 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaucgaauauguaUUUUAAu |||||| gaaaaccaagaauaAAAAUUu 2 8 1262 1282 [mm9:9:66221843-66221863:+] 0.5134 120 6 -1.15 -0.1631 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugAUCGAAUAUGUAUUUUAAu | || || |: ||||||| auUUGCAUAAAU-UAAAAUUa 2 20 525 544 [mm9:9:66323262-66323281:+] 0.4987 153 7 -5.01 -1.1207 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaucgaauAUGUAUUUUAAu ||:| |||||| aauuaaaauUAUAAAAAAUUa 2 13 534 554 [mm9:9:66323271-66323291:+] 0.4987 124 6 -6.39 -0.1658 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaucGAAUAUGUAUUUUAAu :|| || ||||||| ggcuuUUUUUAAUUAAAAUUu 2 17 2513 2533 [mm9:9:66355243-66355263:+] 0.5006 152 7 -5.44 -0.4292 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaucgaauauGUAUUUUAAu ||||||||| ugacccccaacCAUAAAAUUa 2 11 1012 1032 [mm9:9:66353742-66353762:+] 0.5002 150 7 -7.95 -0.6169 MIMAT0004896 mmu-miR-590-3p 235439 Herc1 ugaUCGAAUAUGUAUUU-UAAu ||:|| |||||:|| ||| gacAGUUU-UACAUGAAUAUUc 2 19 352 372 [mm9:9:66356483-66356503:+] 0.7525 120 0 -9.98 -0.1420 MIMAT0005447 mmu-miR-449b 235439 Herc1 cggucgaUUGUUGUGACGGa | |||||||||| cuuuagaACCAACACUGCCa 2 14 445 464 [mm9:9:66298839-66298858:+] 0.5729 157 7 -20.16 -1.0758 MIMAT0005447 mmu-miR-449b 235439 Herc1 cggucgaUUGUUGUGACGGa | |||||||||| cuuuagaACCAACACUGCCa 2 14 2409 2428 [mm9:9:66298839-66298858:+] 0.5729 157 7 -20.16 -0.5192 MIMAT0005447 mmu-miR-449b 235439 Herc1 cgGUCGAUUGUUGU-GACGGa || ||||||| ||||| uaCAUGAAACAACAUCUGCCu 2 19 1653 1673 [mm9:9:66298083-66298103:+] 0.5187 130 0 -20.14 -0.2107 MIMAT0005447 mmu-miR-449b 235439 Herc1 cggucGAUUGUU-GUGACGGa |||:||| ||||||| ugggcCUAGCAAGCACUGCCc 2 16 644 664 [mm9:9:66353374-66353394:+] 0.5367 162 7 -23.09 -0.1883 MIMAT0004936 mmu-miR-873 235439 Herc1 uccucUGAG-UGUUCAAGGACg :||| || |||||||| gugcuGCUCUAC-AGUUCCUGa 2 17 2688 2708 [mm9:9:66299118-66299138:+] 0.7533 153 7 -19.27 -0.2311 MIMAT0004936 mmu-miR-873 235439 Herc1 uccucugaguGUUCAAGGACg ::|||||||| uuuuuuuauuUGAGUUCCUGc 2 12 133 153 [mm9:9:66296563-66296583:+] 0.4746 147 7 -16.71 -0.1980 MIMAT0004936 mmu-miR-873 235439 Herc1 uccUCUGAGUG-UUCAAGGACg | :||| | ||||||||| uguAUGCUCUCUAAGUUCCUGu 2 19 1612 1633 [mm9:9:66324349-66324370:+] 0.4881 161 7 -20.45 -0.6316 MIMAT0004941 mmu-miR-544 235439 Herc1 cucgaACGAUUUUUACGU-CUUa || | ||||||| ||| gcaagUGACACAAAUGCAUGAAa 2 18 252 274 [mm9:9:66322989-66323011:+] 0.5355 125 0 -8.89 -0.4218 MIMAT0004941 mmu-miR-544 235439 Herc1 cucgaACGAUUUUUAC-GUCUUa || || |:|| ||||| guaucUGAUACCAGUGUCAGAAu 2 18 1767 1789 [mm9:9:66324504-66324526:+] 0.5148 121 0 -10.96 -0.1715 MIMAT0004941 mmu-miR-544 235439 Herc1 cucgaacGAUUUUUACGUCUUa || :| |||||||| uaaauauCU-GAUAUGCAGAAu 2 16 1080 1100 [mm9:9:66353810-66353830:+] 0.5007 149 7 -14.69 -0.6001 MIMAT0004943 mmu-miR-653 235439 Herc1 gucaucucuaacaAAGUUGUg ||||||| gaucuacuacauaUUCAACAa 2 9 1600 1620 [mm9:9:66298030-66298050:+] 0.5303 140 7 -7.18 -0.7564 MIMAT0004943 mmu-miR-653 235439 Herc1 guCAUCUCUAACAA-AGUUGUg ||| | ||| || |||||| uuGUAUAAAUUAUUCUCAACAu 2 20 1956 1977 [mm9:9:66298386-66298407:+] 0.5299 135 6 -6.57 -0.3482 MIMAT0004943 mmu-miR-653 235439 Herc1 guCAUCUCUAACAAAGUUGUg | || |:| ||||||| uuGAAGUGGUAUCUUCAACAa 2 20 8 28 [mm9:9:66322745-66322765:+] 0.5048 151 7 -11.63 -0.8625 MIMAT0005850 mmu-miR-1192 235439 Herc1 uuAAACCAGA-CAAACAAACAAa ||| | | | |||||||| gaUUUAUUAUGGGAUGUUUGUUc 2 21 1802 1824 [mm9:9:66298232-66298254:+] 0.5528 151 7 -13.36 -0.1346 MIMAT0005850 mmu-miR-1192 235439 Herc1 uuAAACCAG-AC-AAAC-AAACAAa | || || || | || |||||| auUGUGUUCAUGAUGUGUUUUGUUu 2 21 1976 2000 [mm9:9:66298406-66298430:+] 0.6330 122 6 -8.79 -0.1907 MIMAT0005850 mmu-miR-1192 235439 Herc1 uuaaacCAGACA---AACAAACAAa |||||| ||||||| gcagaaGUCUGUAAAGAGUUUGUUg 2 17 1129 1153 [mm9:9:66221710-66221734:+] 0.5330 147 7 -13.47 -0.4365

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G040796 Herc1 Mus musculus 235439

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Herc1 RAID00003317 mmu-miR-33-5p miRNA MIMAT0000667 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00016128 mmu-miR-340-5p miRNA MIMAT0004651 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00032638 mmu-miR-425-5p miRNA MIMAT0004750 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00070551 mmu-let-7f-5p miRNA MIMAT0000525 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00074975 mmu-miR-27a-5p miRNA MIMAT0004633 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00126129 mmu-let-7g-5p miRNA MIMAT0000121 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00138265 mmu-miR-467f miRNA MIMAT0005846 Herc1 mRNA 235439 Prediction 0.2202 Herc1 RAID00154833 mmu-miR-6911-3p miRNA MIMAT0027723 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00170280 mmu-miR-542-3p miRNA MIMAT0003172 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00199523 mmu-miR-186-5p miRNA MIMAT0000215 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00247860 mmu-miR-1904 miRNA MIMAT0007874 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00343576 mmu-miR-6920-5p miRNA MIMAT0027740 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00379098 mmu-miR-17-5p miRNA MIMAT0000649 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00385299 mmu-miR-494-3p miRNA MIMAT0003182 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00411473 mmu-miR-222-3p miRNA MIMAT0000670 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00422357 mmu-miR-329-3p miRNA MIMAT0000567 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00441398 mmu-miR-146b-5p miRNA MIMAT0003475 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00462921 mmu-miR-383-5p miRNA MIMAT0000748 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00510820 mmu-miR-143-3p miRNA MIMAT0000247 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00512661 mmu-miR-708-5p miRNA MIMAT0004828 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00574055 mmu-miR-190a-5p miRNA MIMAT0000220 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00576739 mmu-miR-136-5p miRNA MIMAT0000148 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00581935 mmu-miR-433-3p miRNA MIMAT0001420 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00590906 mmu-miR-145a-5p miRNA MIMAT0000157 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00614676 mmu-miR-299a-3p miRNA MIMAT0004577 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00671383 mmu-miR-29c-3p miRNA MIMAT0000536 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00683753 mmu-miR-204-5p miRNA MIMAT0000237 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00718623 mmu-miR-499-5p miRNA MIMAT0003482 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00747755 mmu-miR-142b miRNA MIMAT0031402 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00794198 mmu-miR-93-5p miRNA MIMAT0000540 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00794806 mmu-miR-101a-3p miRNA MIMAT0000133 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00838338 mmu-miR-146a-5p miRNA MIMAT0000158 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00864781 mmu-miR-196a-5p miRNA MIMAT0000518 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00876908 mmu-miR-152-3p miRNA MIMAT0000162 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00890840 mmu-miR-590-3p miRNA MIMAT0004896 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00892011 mmu-miR-181d-5p miRNA MIMAT0004324 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00893576 mmu-miR-504-5p miRNA MIMAT0004889 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00922886 mmu-miR-493-5p miRNA MIMAT0017276 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00948248 mmu-miR-374b-5p miRNA MIMAT0003727 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID00979908 mmu-miR-7675-3p miRNA MIMAT0029859 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01005663 mmu-miR-362-3p miRNA MIMAT0004684 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01066157 mmu-miR-20a-5p miRNA MIMAT0000529 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01110592 mmu-let-7b-5p miRNA MIMAT0000522 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01113542 mmu-miR-10a-5p miRNA MIMAT0000648 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01132408 mmu-miR-216b-5p miRNA MIMAT0003729 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01170262 mmu-miR-590-5p miRNA MIMAT0004895 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01221492 mmu-miR-290a-5p miRNA MIMAT0000366 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01242948 mmu-let-7c-1-3p miRNA MIMAT0004622 Herc1 mRNA 235439 Prediction 0.2202 Herc1 RAID01248704 mmu-miR-466f-3p miRNA MIMAT0004882 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01259445 mmu-miR-34b-5p miRNA MIMAT0000382 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01268847 mmu-miR-96-5p miRNA MIMAT0000541 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01331482 mmu-miR-296-3p miRNA MIMAT0004576 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01346335 mmu-miR-16-5p miRNA MIMAT0000527 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01353215 mmu-miR-196b-5p miRNA MIMAT0001081 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01365111 mmu-miR-221-3p miRNA MIMAT0000669 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01384220 mmu-let-7d-5p miRNA MIMAT0000383 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01385249 mmu-miR-106a-5p miRNA MIMAT0000385 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01394962 mmu-miR-6899-3p miRNA MIMAT0027699 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01401407 mmu-miR-15a-5p miRNA MIMAT0000526 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01417888 mmu-miR-223-3p miRNA MIMAT0000665 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01428822 mmu-miR-135a-5p miRNA MIMAT0000147 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01475521 mmu-miR-18a-5p miRNA MIMAT0000528 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01478740 mmu-miR-544-3p miRNA MIMAT0004941 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01519451 mmu-miR-29a-3p miRNA MIMAT0000535 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01540529 mmu-miR-101b-3p miRNA MIMAT0000616 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01542815 mmu-miR-448-3p miRNA MIMAT0001533 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01584428 mmu-miR-378a-3p miRNA MIMAT0003151 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01592308 mmu-miR-154-5p miRNA MIMAT0000164 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01683165 mmu-miR-128-3p miRNA MIMAT0000140 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01707807 mmu-miR-7236-5p miRNA MIMAT0028440 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01712664 mmu-miR-200b-3p miRNA MIMAT0000233 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01719968 mmu-miR-34a-5p miRNA MIMAT0000542 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01729459 mmu-miR-135b-5p miRNA MIMAT0000612 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01730876 mmu-miR-125a-3p miRNA MIMAT0004528 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01735549 mmu-miR-217-5p miRNA MIMAT0000679 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01761684 mmu-miR-195a-5p miRNA MIMAT0000225 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01763118 mmu-miR-382-3p miRNA MIMAT0004691 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01778853 mmu-miR-653-5p miRNA MIMAT0004943 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01880726 mmu-miR-339-5p miRNA MIMAT0000584 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01887769 mmu-miR-203-3p miRNA MIMAT0000236 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01896766 mmu-miR-380-3p miRNA MIMAT0000745 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01923192 mmu-miR-34c-5p miRNA MIMAT0000381 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01923815 mmu-miR-29b-3p miRNA MIMAT0000127 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01935847 mmu-miR-328-3p miRNA MIMAT0000565 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01966177 mmu-miR-107-3p miRNA MIMAT0000647 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID01978039 mmu-miR-150-5p miRNA MIMAT0000160 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02022468 mmu-miR-320-3p miRNA MIMAT0000666 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02033013 mmu-miR-23a-3p miRNA MIMAT0000532 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02034321 mmu-miR-211-5p miRNA MIMAT0000668 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02073997 mmu-miR-10b-5p miRNA MIMAT0000208 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02076400 mmu-miR-28a-5p miRNA MIMAT0000653 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02081984 mmu-miR-27b-3p miRNA MIMAT0000126 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02093936 mmu-miR-873a-5p miRNA MIMAT0004936 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02142657 mmu-miR-429-3p miRNA MIMAT0001537 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02193077 mmu-miR-322-5p miRNA MIMAT0000548 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02196569 mmu-miR-384-3p miRNA MIMAT0001076 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02206119 mmu-miR-31-5p miRNA MIMAT0000538 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02211023 mmu-let-7e-5p miRNA MIMAT0000524 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02304824 mmu-miR-24-3p miRNA MIMAT0000219 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02310111 mmu-miR-325-3p miRNA MIMAT0004640 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02312029 mmu-miR-324-5p miRNA MIMAT0000555 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02335194 mmu-miR-185-5p miRNA MIMAT0000214 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02335642 mmu-miR-292a-5p miRNA MIMAT0000369 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02335683 mmu-miR-98-5p miRNA MIMAT0000545 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02337858 mmu-miR-497a-5p miRNA MIMAT0003453 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02344950 mmu-miR-592-5p miRNA MIMAT0003730 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02463412 mmu-miR-338-3p miRNA MIMAT0000582 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02464540 mmu-miR-876-3p miRNA MIMAT0004855 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02465786 mmu-miR-21a-5p miRNA MIMAT0000530 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02479350 mmu-miR-6996-5p miRNA MIMAT0027894 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02506494 mmu-miR-7238-3p miRNA MIMAT0028445 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02516624 mmu-miR-18b-5p miRNA MIMAT0004858 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02555499 mmu-miR-103-3p miRNA MIMAT0000546 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02574727 mmu-miR-361-5p miRNA MIMAT0000704 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02578747 mmu-miR-452-5p miRNA MIMAT0001637 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02584243 mmu-miR-205-5p miRNA MIMAT0000238 Herc1 mRNA 235439 CLIP-seq//Prediction 0.6308 Herc1 RAID02586068 mmu-miR-335-5p miRNA MIMAT0000766 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02667998 mmu-miR-449c-5p miRNA MIMAT0003460 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02747906 mmu-miR-15b-5p miRNA MIMAT0000124 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02763917 mmu-miR-466l-3p miRNA MIMAT0005830 Herc1 mRNA 235439 Prediction 0.2202 Herc1 RAID02932514 mmu-miR-144-3p miRNA MIMAT0000156 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID02959875 mmu-miR-19b-3p miRNA MIMAT0000513 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03022134 mmu-miR-139-5p miRNA MIMAT0000656 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03032645 mmu-miR-200c-3p miRNA MIMAT0000657 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03033567 mmu-miR-495-3p miRNA MIMAT0003456 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03033849 mmu-miR-23b-3p miRNA MIMAT0000125 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03039047 mmu-miR-1192 miRNA MIMAT0005850 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03044388 mmu-let-7c-5p miRNA MIMAT0000523 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03102772 mmu-miR-216a-5p miRNA MIMAT0000662 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03120189 mmu-miR-882 miRNA MIMAT0004847 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03134055 mmu-miR-30e-5p miRNA MIMAT0000248 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03170151 mmu-miR-503-5p miRNA MIMAT0003188 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03179427 mmu-miR-302d-3p miRNA MIMAT0003377 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03183613 mmu-miR-20b-5p miRNA MIMAT0003187 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03194232 mmu-miR-496a-3p miRNA MIMAT0003738 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03239251 mmu-let-7a-5p miRNA MIMAT0000521 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03309704 mmu-miR-106b-5p miRNA MIMAT0000386 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03347163 mmu-miR-410-3p miRNA MIMAT0001091 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03363609 mmu-let-7i-5p miRNA MIMAT0000122 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03367049 mmu-miR-489-3p miRNA MIMAT0003112 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03414507 mmu-miR-653-3p miRNA MIMAT0017284 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03440940 mmu-miR-539-5p miRNA MIMAT0003169 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03518336 mmu-miR-155-5p miRNA MIMAT0000165 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03533498 mmu-miR-184-3p miRNA MIMAT0000213 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03620230 mmu-miR-27a-3p miRNA MIMAT0000537 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03620414 mmu-miR-140-5p miRNA MIMAT0000151 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03661588 mmu-miR-499-3p miRNA MIMAT0017254 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03663056 mmu-miR-124-3p miRNA MIMAT0000134 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03752250 mmu-miR-19a-3p miRNA MIMAT0000651 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03781573 mmu-miR-381-3p miRNA MIMAT0000746 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03892667 mmu-miR-218-5p miRNA MIMAT0000663 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID03968849 mmu-miR-190b-5p miRNA MIMAT0004852 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID04017205 mmu-miR-449a-5p miRNA MIMAT0001542 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID04025751 mmu-miR-449b miRNA MIMAT0005447 Herc1 mRNA 235439 Prediction 0.1828 Herc1 RAID04039308 mmu-miR-210-5p miRNA MIMAT0017052 Herc1 mRNA 235439 Prediction 0.1828