DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004527 mmu-miR-124* 50849 Rnf10 uaGUUC-CAGGC-GACACUUGUgc :||| |::| | |||||| uuUAAGUAUUUGAGUUUGAACAga 3 21 66 89 [mm9:5:115691905-115691928:-] 0.6424 126 0 -11.34 -0.1719 MIMAT0004527 mmu-miR-124* 50849 Rnf10 uaGUUC-CAGGC-GACACUUGUgc :||| |::| | |||||| uuUAAGUAUUUGAGUUUGAACAga 3 21 66 89 [mm9:5:115691905-115691928:-] 0.6424 126 0 -11.34 -0.1718 MIMAT0004574 mmu-miR-294* 50849 Rnf10 ucuaucccggagguaAAACUCa |||||| uguaauuuuuaaguaUUUGAGu 2 8 59 80 [mm9:5:115691914-115691935:-] 0.6424 120 6 -7.79 -0.1306 MIMAT0004574 mmu-miR-294* 50849 Rnf10 ucuaucccggagguaAAACUCa |||||| uguaauuuuuaaguaUUUGAGu 2 8 59 80 [mm9:5:115691914-115691935:-] 0.6424 120 6 -7.79 -0.1305 MIMAT0004575 mmu-miR-295* 50849 Rnf10 cuucacacggggUGUAAACUCa ::||||||| uguaauuuuuaaGUAUUUGAGu 2 11 59 80 [mm9:5:115691914-115691935:-] 0.6424 142 7 -11.20 -1.1750 MIMAT0004575 mmu-miR-295* 50849 Rnf10 cuucacacggggUGUAAACUCa ::||||||| uguaauuuuuaaGUAUUUGAGu 2 11 59 80 [mm9:5:115691914-115691935:-] 0.6424 142 7 -11.20 -1.1749 MIMAT0004579 mmu-miR-302a* 50849 Rnf10 cguucAUGUUGGUGCAAAUUCa |:| :: |: |||||| uuugcUGCUGUAAUUUUUAAGu 2 18 51 72 [mm9:5:115691922-115691943:-] 0.6424 121 6 -7.27 -0.1415 MIMAT0004579 mmu-miR-302a* 50849 Rnf10 cguucAUGUUGGUGCAAAUUCa |:| :: |: |||||| uuugcUGCUGUAAUUUUUAAGu 2 18 51 72 [mm9:5:115691922-115691943:-] 0.6424 121 6 -7.27 -0.1414 MIMAT0004628 mmu-miR-21* 50849 Rnf10 cugucggguAGCUGACGACAac |: :||||||| ugcuuuuguUUUGCUGCUGUaa 3 14 42 63 [mm9:5:115691931-115691952:-] 0.5741 129 0 -13.33 -0.1595 MIMAT0004628 mmu-miR-21* 50849 Rnf10 cugucggguAGCUGACGACAac |: :||||||| ugcuuuuguUUUGCUGCUGUaa 3 14 42 63 [mm9:5:115691931-115691952:-] 0.5741 129 0 -13.33 -0.1594 MIMAT0004630 mmu-miR-26b* 50849 Rnf10 cucgguucauuaccuCUUGUCc |||||| uaaguauuugaguuuGAACAGa 2 8 68 89 [mm9:5:115691905-115691926:-] 0.6424 120 6 -12.79 -0.2063 MIMAT0004630 mmu-miR-26b* 50849 Rnf10 cucgguucauuaccuCUUGUCc |||||| uaaguauuugaguuuGAACAGa 2 8 68 89 [mm9:5:115691905-115691926:-] 0.6424 120 6 -12.79 -0.2062 MIMAT0002111 mmu-miR-470 50849 Rnf10 ugaguggucacggucaGGUUCUu |||||| acaaagugagggggaaCCAAGAa 2 8 123 145 [mm9:5:115691849-115691871:-] 0.5983 120 6 -18.22 -0.1353 MIMAT0002111 mmu-miR-470 50849 Rnf10 ugaguggucacggucaGGUUCUu |||||| acaaagugagggggaaCCAAGAa 2 8 123 145 [mm9:5:115691849-115691871:-] 0.5983 120 6 -18.22 -0.1381 MIMAT0003731 mmu-miR-671-5p 50849 Rnf10 gaggucggggagguccCGAAGGa |||||| uacaguguauuuuccaGCUUCCc 2 8 155 177 [mm9:5:115691817-115691839:-] 0.7232 120 6 -20.68 -0.1110 MIMAT0003731 mmu-miR-671-5p 50849 Rnf10 gaggucggggagguccCGAAGGa |||||| uacaguguauuuuccaGCUUCCc 2 8 155 177 [mm9:5:115691817-115691839:-] 0.7232 120 6 -20.68 -0.1113 MIMAT0003896 mmu-miR-763 50849 Rnf10 cgGUGAC-CAAGAAGGGUCGAcc :|| | || :||:|||||| aaUACAGUGUAUUUUCCAGCUuc 3 21 153 175 [mm9:5:115691819-115691841:-] 0.7232 143 0 -17.63 -0.1045 MIMAT0003896 mmu-miR-763 50849 Rnf10 cgGUGAC-CAAGAAGGGUCGAcc :|| | || :||:|||||| aaUACAGUGUAUUUUCCAGCUuc 3 21 153 175 [mm9:5:115691819-115691841:-] 0.7232 143 0 -17.63 -0.1047 MIMAT0004825 mmu-miR-423-5p 50849 Rnf10 uuucagagcgagagacGGGGAGu |||||| guguauuuuccagcuuCCCCUCu 2 8 159 181 [mm9:5:115691813-115691835:-] 0.7232 120 6 -15.68 -0.2923 MIMAT0004825 mmu-miR-423-5p 50849 Rnf10 uuucagagcgagagacGGGGAGu |||||| guguauuuuccagcuuCCCCUCu 2 8 159 181 [mm9:5:115691813-115691835:-] 0.7232 120 6 -15.68 -0.2910 MIMAT0003461 mmu-miR-683 50849 Rnf10 cuccuGUGUCGAAUGUCGUCc | | :||||| ||| gcuucCCCUCUUUACACCAGa 2 17 171 191 [mm9:5:115691803-115691823:-] 0.7232 120 0 -7.37 -0.1670 MIMAT0003461 mmu-miR-683 50849 Rnf10 cuccuGUGUCGAAUGUCGUCc | | :||||| ||| gcuucCCCUCUUUACACCAGa 2 17 171 191 [mm9:5:115691803-115691823:-] 0.7232 120 0 -7.37 -0.1686 MIMAT0003474 mmu-miR-694 50849 Rnf10 gaaguccguUGUAAAAGuc ::|||||| aaauacaguGUAUUUUCca 3 11 152 170 [mm9:5:115691824-115691842:-] 0.7232 122 0 -7.64 -0.1742 MIMAT0003474 mmu-miR-694 50849 Rnf10 gaaguccguUGUAAAAGuc ::|||||| aaauacaguGUAUUUUCca 3 11 152 170 [mm9:5:115691824-115691842:-] 0.7232 122 0 -7.64 -0.1723 MIMAT0004882 mmu-miR-466f-3p 50849 Rnf10 cacacauacacacaCACAUAc |||||| aaauuuuaaauacaGUGUAUu 2 8 145 165 [mm9:5:115691829-115691849:-] 0.6608 120 6 -5.45 -0.1041 MIMAT0004893 mmu-miR-574-5p 50849 Rnf10 ugUGUGAGUGUGUGUGUGUGAGu | | | | ::|: |||||| ccAGAAUAAAGUAUUGACACUCa 2 22 187 209 [mm9:5:115691785-115691807:-] 0.7232 121 6 -12.48 -0.5106 MIMAT0004893 mmu-miR-574-5p 50849 Rnf10 ugUGUGAGUGUGUGUGUGUGAGu | | | | ::|: |||||| ccAGAAUAAAGUAUUGACACUCa 2 22 187 209 [mm9:5:115691785-115691807:-] 0.7232 121 6 -12.48 -0.7014 MIMAT0007876 mmu-miR-1907 50849 Rnf10 uggaggucuAGGAGACGACGAg | :|:||||||| cugugcuuuUGUUUUGCUGCUg 2 14 39 60 [mm9:5:115691934-115691955:-] 0.5741 149 7 -15.33 -1.1586 MIMAT0007876 mmu-miR-1907 50849 Rnf10 uggaggucuAGGAGACGACGAg | :|:||||||| cugugcuuuUGUUUUGCUGCUg 2 14 39 60 [mm9:5:115691934-115691955:-] 0.5741 149 7 -15.33 -1.1585 MIMAT0009412 mmu-miR-1946a 50849 Rnf10 uuuucacacacgGUGGUGACGGG-CCGa |||:|:||||| ||| ------------CACUAUUGCCCAGGCg 2 16 1 16 [mm9:5:115691978-115691993:-] 0.6785 131 0 -23.87 -0.6823 MIMAT0009412 mmu-miR-1946a 50849 Rnf10 uuuucacacacgGUGGUGACGGG-CCGa |||:|:||||| ||| ------------CACUAUUGCCCAGGCg 2 16 1 16 [mm9:5:115691978-115691993:-] 0.6785 131 0 -23.87 -0.7909 MIMAT0009444 mmu-miR-1970 50849 Rnf10 guuucggauaggggucACUGUGu |||||| caccagaauaaaguauUGACACu 2 8 185 207 [mm9:5:115691787-115691809:-] 0.7232 120 6 -12.20 -0.2746 MIMAT0011210 mmu-miR-2134 50849 Rnf10 cguggggcaaagGGUUCUg |||||| agugagggggaaCCAAGAa 2 8 127 145 [mm9:5:115691849-115691867:-] 0.5983 120 6 -9.01 -0.1407 MIMAT0011210 mmu-miR-2134 50849 Rnf10 cguggggcaaagGGUUCUg |||||| agugagggggaaCCAAGAa 2 8 127 145 [mm9:5:115691849-115691867:-] 0.5983 120 6 -9.01 -0.1436 MIMAT0011222 mmu-miR-2146 50849 Rnf10 guguaccuugGGAAGAGGUg ||||||||| ugcccaggcgCCUUCUCCAu 2 11 7 26 [mm9:5:115691968-115691987:-] 0.5741 150 7 -20.42 -0.2156 MIMAT0011222 mmu-miR-2146 50849 Rnf10 guguaccuugGGAAGAGGUg ||||||||| ugcccaggcgCCUUCUCCAu 2 11 7 26 [mm9:5:115691968-115691987:-] 0.5741 150 7 -20.42 -0.3880 MIMAT0012772 mmu-miR-599 50849 Rnf10 caaacUAUU---UGACUGUGuu |||| |:|||||| ccagaAUAAAGUAUUGACACuc 3 15 187 208 [mm9:5:115691786-115691807:-] 0.7232 129 0 -9.79 -0.3900 MIMAT0012772 mmu-miR-599 50849 Rnf10 caaacUAUU---UGACUGUGuu |||| |:|||||| ccagaAUAAAGUAUUGACACuc 3 15 187 208 [mm9:5:115691786-115691807:-] 0.7232 129 0 -9.79 -0.4185 MIMAT0015640 mmu-miR-3470a 50849 Rnf10 ggUCGGACCAGAUGUUUCACu :||:| || |||||||| ggGGCUU--UCCACAAAGUGa 2 20 113 131 [mm9:5:115691863-115691881:-] 0.5983 156 7 -16.94 -0.5598 MIMAT0015640 mmu-miR-3470a 50849 Rnf10 ggUCGGACCAGAUGUUUCACu :||:| || |||||||| ggGGCUU--UCCACAAAGUGa 2 20 113 131 [mm9:5:115691863-115691881:-] 0.5983 156 7 -16.94 -0.5596 MIMAT0000124 mmu-miR-15b 50849 Rnf10 acauuugguACUACACGACGAu || | ||||||| cugugcuuuUGUUUUGCUGCUg 2 14 39 60 [mm9:5:115691934-115691955:-] 0.5741 149 7 -14.98 -1.1586 MIMAT0000124 mmu-miR-15b 50849 Rnf10 acauuugguACUACACGACGAu || | ||||||| cugugcuuuUGUUUUGCUGCUg 2 14 39 60 [mm9:5:115691934-115691955:-] 0.5741 149 7 -14.98 -1.1585 MIMAT0000145 mmu-miR-133a 50849 Rnf10 gucgaccaACUUCCCC-UGGUUu |||:|||| ||||| ccacaaagUGAGGGGGAACCAAg 2 15 121 143 [mm9:5:115691851-115691873:-] 0.5983 130 0 -23.09 -0.7776 MIMAT0000145 mmu-miR-133a 50849 Rnf10 gucgaccaACUUCCCC-UGGUUu |||:|||| ||||| ccacaaagUGAGGGGGAACCAAg 2 15 121 143 [mm9:5:115691851-115691873:-] 0.5983 130 0 -23.09 -0.7625 MIMAT0000150 mmu-miR-138 50849 Rnf10 gccggacuaAGUGUUGUGGUCga || : ||||||| agcuuccccUCUUUACACCAGaa 3 15 170 192 [mm9:5:115691802-115691824:-] 0.7232 130 0 -16.01 -0.5261 MIMAT0000150 mmu-miR-138 50849 Rnf10 gccggacuaAGUGUUGUGGUCga || : ||||||| agcuuccccUCUUUACACCAGaa 3 15 170 192 [mm9:5:115691802-115691824:-] 0.7232 130 0 -16.01 -0.5292 MIMAT0000153 mmu-miR-141 50849 Rnf10 ggUAGAAAUGGUCUGUCACAau | :|||| | ||||||| aaAAUUUUA-AAUACAGUGUau 3 21 144 164 [mm9:5:115691830-115691850:-] 0.6608 138 0 -10.93 -0.1714 MIMAT0000153 mmu-miR-141 50849 Rnf10 ggUAGAAAUGGUCUGUCACAau | :|||| | ||||||| aaAAUUUUA-AAUACAGUGUau 3 21 144 164 [mm9:5:115691830-115691850:-] 0.6608 138 0 -10.93 -0.1834 MIMAT0000225 mmu-miR-195 50849 Rnf10 cgguuAUAAAGACACGACGAu | || :| ||||||| ugugcUUUUGUUUUGCUGCUg 2 17 40 60 [mm9:5:115691934-115691954:-] 0.5741 152 7 -16.35 -1.1528 MIMAT0000225 mmu-miR-195 50849 Rnf10 cgguuAUAAAGACACGACGAu | || :| ||||||| ugugcUUUUGUUUUGCUGCUg 2 17 40 60 [mm9:5:115691934-115691954:-] 0.5741 152 7 -16.35 -1.1526 MIMAT0000233 mmu-miR-200b 50849 Rnf10 aguaguaaugguccgUCAUAAu |||||| cugcuguaauuuuuaAGUAUUu 2 8 55 76 [mm9:5:115691918-115691939:-] 0.6424 120 6 -4.50 -0.1095 MIMAT0000233 mmu-miR-200b 50849 Rnf10 aguaguaaugguccgUCAUAAu |||||| uuuacaccagaauaaAGUAUUg 2 8 181 202 [mm9:5:115691792-115691813:-] 0.7232 120 6 -13.11 -0.1033 MIMAT0000233 mmu-miR-200b 50849 Rnf10 aguaguaaugguccgUCAUAAu |||||| cugcuguaauuuuuaAGUAUUu 2 8 55 76 [mm9:5:115691918-115691939:-] 0.6424 120 6 -4.50 -0.1094 MIMAT0000246 mmu-miR-122 50849 Rnf10 guUUGUGGUAACAGUGUGAGgu ||:| :| | |||||| agAAUAAAGUAUUGACACUCaa 3 21 189 210 [mm9:5:115691784-115691805:-] 0.7232 132 0 -13.44 -0.1674 MIMAT0000246 mmu-miR-122 50849 Rnf10 guUUGUGGUAACAGUGUGAGgu ||:| :| | |||||| agAAUAAAGUAUUGACACUCaa 3 21 189 210 [mm9:5:115691784-115691805:-] 0.7232 132 0 -13.44 -0.1912 MIMAT0000379 mmu-miR-301a 50849 Rnf10 cgaaacUGUUAUGAUAAC-GUGAc |:|| | ||||| |||| accagaAUAA-AGUAUUGACACUc 2 18 186 208 [mm9:5:115691786-115691808:-] 0.7232 123 0 -8.42 -1.3048 MIMAT0000379 mmu-miR-301a 50849 Rnf10 cgaaacUGUUAUGAUAAC-GUGAc |:|| | ||||| |||| accagaAUAA-AGUAUUGACACUc 2 18 186 208 [mm9:5:115691786-115691808:-] 0.7232 123 0 -8.42 -1.3105 MIMAT0000519 mmu-miR-200a 50849 Rnf10 ugUAGCAAUGGUCUGUCACAau ||: ||| | ||||||| aaAUU-UUA-AAUACAGUGUau 3 21 145 164 [mm9:5:115691830-115691849:-] 0.6608 132 0 -8.33 -0.1730 MIMAT0000519 mmu-miR-200a 50849 Rnf10 ugUAGCAAUGGUCUGUCACAau ||: ||| | ||||||| aaAUU-UUA-AAUACAGUGUau 3 21 145 164 [mm9:5:115691830-115691849:-] 0.6608 132 0 -8.33 -0.1851 MIMAT0000526 mmu-miR-15a 50849 Rnf10 guguuUGGUAAU-ACACGACGAu :|: ||: | ||||||| ucuguGCUUUUGUUUUGCUGCUg 2 18 38 60 [mm9:5:115691934-115691956:-] 0.5741 148 7 -13.53 -1.1567 MIMAT0000526 mmu-miR-15a 50849 Rnf10 guguuUGGUAAU-ACACGACGAu :|: ||: | ||||||| ucuguGCUUUUGUUUUGCUGCUg 2 18 38 60 [mm9:5:115691934-115691956:-] 0.5741 148 7 -13.53 -1.1566 MIMAT0000527 mmu-miR-16 50849 Rnf10 gcgguuauAAAU-GCACGACGAu |||: : ||||||| ucugugcuUUUGUUUUGCUGCUg 2 15 38 60 [mm9:5:115691934-115691956:-] 0.5741 145 7 -18.75 -1.1528 MIMAT0000527 mmu-miR-16 50849 Rnf10 gcgguuauAAAU-GCACGACGAu |||: : ||||||| ucugugcuUUUGUUUUGCUGCUg 2 15 38 60 [mm9:5:115691934-115691956:-] 0.5741 145 7 -18.75 -1.1526 MIMAT0000533 mmu-miR-26a 50849 Rnf10 ucggauaggaccuaaUGAACUu |||||| aaguauugacacucaACUUGA- 2 8 195 215 [mm9:5:115691779-115691799:-] 0.6457 120 6 -6.28 -0.1853 MIMAT0000534 mmu-miR-26b 50849 Rnf10 uggauaggacuuaaUGAACUu |||||| aguauugacacucaACUUGA- 2 8 196 215 [mm9:5:115691779-115691798:-] 0.6457 120 6 -6.31 -0.1853 MIMAT0000548 mmu-miR-322 50849 Rnf10 agguuuuguACUUAACGACGAc || |||||||| cugugcuuuUGUUUUGCUGCUg 2 14 39 60 [mm9:5:115691934-115691955:-] 0.5741 149 7 -17.05 -1.1605 MIMAT0000548 mmu-miR-322 50849 Rnf10 agguuuuguACUUAACGACGAc || |||||||| cugugcuuuUGUUUUGCUGCUg 2 14 39 60 [mm9:5:115691934-115691955:-] 0.5741 149 7 -17.05 -1.1604 MIMAT0000657 mmu-miR-200c 50849 Rnf10 agguaguaaugggccgUCAUAAu |||||| gcugcuguaauuuuuaAGUAUUu 2 8 54 76 [mm9:5:115691918-115691940:-] 0.6424 120 6 -7.58 -0.1095 MIMAT0000657 mmu-miR-200c 50849 Rnf10 agguaguaaugggccgUCAUAAu |||||| cuuuacaccagaauaaAGUAUUg 2 8 180 202 [mm9:5:115691792-115691814:-] 0.7232 120 6 -10.17 -0.1033 MIMAT0000657 mmu-miR-200c 50849 Rnf10 agguaguaaugggccgUCAUAAu |||||| gcugcuguaauuuuuaAGUAUUu 2 8 54 76 [mm9:5:115691918-115691940:-] 0.6424 120 6 -7.58 -0.1094 MIMAT0000661 mmu-miR-214 50849 Rnf10 ugACGGACAGACACGGACGACa |||:| | | | |||||| ugUGCUUUUGUUUUGCUGCUGu 2 21 40 61 [mm9:5:115691933-115691954:-] 0.5741 132 6 -18.94 -0.2511 MIMAT0000661 mmu-miR-214 50849 Rnf10 ugACGGACAGACACGGACGACa |||:| | | | |||||| ugUGCUUUUGUUUUGCUGCUGu 2 21 40 61 [mm9:5:115691933-115691954:-] 0.5741 132 6 -18.94 -0.2509 MIMAT0000664 mmu-miR-219 50849 Rnf10 ucUUAACGCAAACCUGUUAGu ||| || | |||| || agAAUAAAGUAUUGACACUCa 2 20 189 209 [mm9:5:115691785-115691805:-] 0.7232 123 0 -10.50 -0.1303 MIMAT0000747 mmu-miR-382 50849 Rnf10 gcuuagguggugcuuGUUGAAg |||||| uaaaguauugacacuCAACUUg 2 8 193 214 [mm9:5:115691780-115691801:-] 0.6457 120 6 -8.48 -0.1828 MIMAT0000769 mmu-miR-133b 50849 Rnf10 aucgaccaACUUCCCC-UGGUUu |||:|||| ||||| ccacaaagUGAGGGGGAACCAAg 2 15 121 143 [mm9:5:115691851-115691873:-] 0.5983 130 0 -23.09 -0.7776 MIMAT0000769 mmu-miR-133b 50849 Rnf10 aucgaccaACUUCCCC-UGGUUu |||:|||| ||||| ccacaaagUGAGGGGGAACCAAg 2 15 121 143 [mm9:5:115691851-115691873:-] 0.5983 130 0 -23.09 -0.7625 MIMAT0001537 mmu-miR-429 50849 Rnf10 ugccguaaUGGUC---UGUCAUAAu ||||| | |||||| cucuuuacACCAGAAUAAAGUAUUg 2 15 178 202 [mm9:5:115691792-115691816:-] 0.7232 121 6 -16.15 -0.1033 MIMAT0001537 mmu-miR-429 50849 Rnf10 ugccguaauggucugUCAUAAu |||||| cugcuguaauuuuuaAGUAUUu 2 8 55 76 [mm9:5:115691918-115691939:-] 0.6424 120 6 -5.95 -0.1095 MIMAT0001537 mmu-miR-429 50849 Rnf10 ugccguaauggucugUCAUAAu |||||| cugcuguaauuuuuaAGUAUUu 2 8 55 76 [mm9:5:115691918-115691939:-] 0.6424 120 6 -5.95 -0.1094 MIMAT0003188 mmu-miR-503 50849 Rnf10 gacGUCAUGACA--AGGGCGACGAu | ||:|| | |:::|||||| ucuCUGUGCUUUUGUUUUGCUGCUg 2 21 36 60 [mm9:5:115691934-115691958:-] 0.5741 143 6 -22.14 -0.2276 MIMAT0003188 mmu-miR-503 50849 Rnf10 gacGUCAUGACA--AGGGCGACGAu | ||:|| | |:::|||||| ucuCUGUGCUUUUGUUUUGCUGCUg 2 21 36 60 [mm9:5:115691934-115691958:-] 0.5741 143 6 -22.14 -0.2274 MIMAT0003453 mmu-miR-497 50849 Rnf10 auguuuggugucACACGACGAc | ||||||| cugugcuuuuguUUUGCUGCUg 2 11 39 60 [mm9:5:115691934-115691955:-] 0.5741 142 7 -14.79 -1.1625 MIMAT0003453 mmu-miR-497 50849 Rnf10 auguuuggugucACACGACGAc | ||||||| cugugcuuuuguUUUGCUGCUg 2 11 39 60 [mm9:5:115691934-115691955:-] 0.5741 142 7 -14.79 -1.1623

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G066059 Rnf10 Mus musculus 50849

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rnf10 mmu-miR-3470a beg:112 end:132 pic:3' GGTCGGACCAGATGTTTCACT 5'& .||.| || ||||||||| &5' --GGCTT--TCCACAAAGTGA 3' Rnf10 mcmv-miR-m01-1 beg:21 end:39 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& | || |.|||||| &5' -----CATCGGG--TTTCCTCT 3' Rnf10 mmu-miR-101b beg:35 end:63 pic:3' AAGT--CGATAGTGT--C-ATGACAT 5'& || ||| | . | |.||||| &5' -TCTGTGCTTTTGTTTTGCTGCTGTA 3' Rnf10 mmu-miR-1188 beg:164 end:190 pic:3' AGGACC--GGGTTGGAGTGTGGT 5'& ||| ||| |.|.|||||| &5' TCCAGCTTCCCCTCTTTACACCA 3' Rnf10 mmu-miR-1224 beg:164 end:186 pic:3' GAGGT-GGAGGGGTCAGGAGTG 5'& |||| |.||||| ||.|.|| &5' -TCCAGCTTCCCC--TCTTTAC 3' Rnf10 mmu-miR-146bstar beg:83 end:106 pic:3' TGGTCTTGACTCAG-GGATCCCG 5'& ||| |.||| | |.|.|||| &5' --CAG-ATTGATTAGCTTGGGGC 3' Rnf10 mmu-miR-15b beg:38 end:61 pic:3' ACATTTGGT-ACTACACGACGAT 5'& || .|. || |||||||. &5' -GT--GCTTTTGTTTTGCTGCTG 3' Rnf10 mmu-miR-16 beg:40 end:61 pic:3' GCGGTTATAAATGCACGACGAT 5'& ||. |.||| |||||||. &5' -GCTTTTGTTT---TGCTGCTG 3' Rnf10 mmu-miR-1897-5p beg:172 end:198 pic:3' GGGGGAGAAA-GAGGTAG-GTTTC 5'& ||||||||| | ||| .|||| &5' -CCCCTCTTTACACCAGAATAAAG 3' Rnf10 mmu-miR-195 beg:40 end:61 pic:3' CGGTTATAAAGACACGACGAT 5'& ||. |.||| |||||||. &5' GCTTTTGTTT---TGCTGCTG 3' Rnf10 mmu-miR-1955 beg:83 end:106 pic:3' TTTTCGACGTC--ACGTA--GGACCCTGA 5'& ||| || |.||||.| &5' --------CAGATTGATTAGCTTGGGGC- 3' Rnf10 mmu-miR-1962 beg:154 end:176 pic:3' TACACAGGGTCAC------GGTCGGAGA 5'& ||||| |||||.|| &5' --------CAGTGTATTTTCCAGCTTC- 3' Rnf10 mmu-miR-1982star beg:3 end:26 pic:3' GGAGGGGTCC-TGGGAG-GGTT 5'& .| |||||| .||.|| ||| &5' -TTGCCCAGGCGCCTTCTCCA- 3' Rnf10 mmu-miR-2146 beg:10 end:27 pic:3' GTGTACCTTGGGAAGAGGTG 5'& || |||||||||. &5' -----GGCG-CCTTCTCCAT 3' Rnf10 mmu-miR-2861 beg:4 end:25 pic:3' GGCGGG-CGGCGGTCCGGGG 5'& .|||| | |||| |.|| &5' -TGCCCAGGCGCCTT-CTCC 3' Rnf10 mmu-miR-322 beg:45 end:61 pic:3' AGGTTTTGTACTTAACGACGAC 5'& || ||||||||| &5' ---------TGTTTTGCTGCTG 3' Rnf10 mmu-miR-330star beg:33 end:56 pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||||||. ||..| ||.||||| &5' TCTCTGT--GCTTT-TGTTTTGC 3' Rnf10 mmu-miR-343 beg:119 end:138 pic:3' AGACCCGTGTAC--TTCCCTCT 5'& |||| .||||.|| &5' ------CACAAAGTGAGGGGGA 3' Rnf10 mmu-miR-483star beg:98 end:117 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& ..|.||| |||||||.| &5' GGGGCGG--GGGGAGGGG--- 3' Rnf10 mmu-miR-485 beg:159 end:176 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& .||. |||||.|| &5' -----TATTTT--CCAGCTTC- 3' Rnf10 mmu-miR-497 beg:40 end:61 pic:3' ATGTTTGGTGTCAC-ACGACGAC 5'& .|. || |||||||| &5' -----GCTTTTGTTTTGCTGCTG 3' Rnf10 mmu-miR-743b-5p beg:68 end:88 pic:3' ACTACCTGTGGTCAGACTTGT 5'& | |. . |||.|||||| &5' ----GTATTTGAGTTTGAACA 3' Rnf10 mmu-miR-761 beg:42 end:59 pic:3' ACACAGTCAAAGTGGGACGACG 5'& ||| ...|||||| &5' --------TTTTGTTTTGCTGC 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf10 RAID00010502 mmu-miR-497a-5p miRNA MIMAT0003453 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6478 Rnf10 RAID00081486 mmu-miR-214-3p miRNA MIMAT0000661 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID00180718 mmu-miR-503-5p miRNA MIMAT0003188 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID00205154 mmu-miR-6353 miRNA MIMAT0025096 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID00260220 mmu-miR-330-3p miRNA MIMAT0000569 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID00283054 mmu-miR-107-3p miRNA MIMAT0000647 Rnf10 mRNA 50849 CLIP-seq 0.5483 Rnf10 RAID00491054 mmu-miR-133b-3p miRNA MIMAT0000769 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID00523689 mmu-miR-200b-3p miRNA MIMAT0000233 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID00739325 mmu-miR-122-5p miRNA MIMAT0000246 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID00868252 mmu-miR-6419 miRNA MIMAT0025175 Rnf10 mRNA 50849 Prediction 0.2202 Rnf10 RAID01284265 mmu-miR-195b miRNA MIMAT0025076 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID01324985 mmu-miR-138-5p miRNA MIMAT0000150 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID01480948 mmu-miR-125b-5p miRNA MIMAT0000136 Rnf10 mRNA 50849 RIP-seq//RNA-seq 0.6606 Rnf10 RAID01616005 mmu-miR-322-5p miRNA MIMAT0000548 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6478 Rnf10 RAID01666385 mmu-miR-301a-3p miRNA MIMAT0000379 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID01675896 mmu-miR-26b-5p miRNA MIMAT0000534 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID01766263 mmu-miR-7045-3p miRNA MIMAT0027995 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID01842374 mmu-miR-16-5p miRNA MIMAT0000527 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6478 Rnf10 RAID01943349 mmu-miR-141-3p miRNA MIMAT0000153 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID02010263 mmu-miR-1907 miRNA MIMAT0007876 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID02281658 mmu-miR-200c-3p miRNA MIMAT0000657 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID02284042 mmu-miR-219a-5p miRNA MIMAT0000664 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID02390043 mmu-miR-382-5p miRNA MIMAT0000747 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID02511740 mmu-miR-15b-5p miRNA MIMAT0000124 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6478 Rnf10 RAID02581371 mmu-miR-295-5p miRNA MIMAT0004575 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID02725064 mmu-miR-290b-5p miRNA MIMAT0029900 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID02767491 mmu-miR-7058-5p miRNA MIMAT0028020 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID02873228 mmu-miR-6951-5p miRNA MIMAT0027802 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID03030416 mmu-miR-103-3p miRNA MIMAT0000546 Rnf10 mRNA 50849 CLIP-seq 0.5483 Rnf10 RAID03413850 mmu-miR-429-3p miRNA MIMAT0001537 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID03537441 mmu-miR-15a-5p miRNA MIMAT0000526 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6478 Rnf10 RAID03696003 mmu-miR-200a-3p miRNA MIMAT0000519 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID03750131 mmu-miR-125a-5p miRNA MIMAT0000135 Rnf10 mRNA 50849 RIP-seq//RNA-seq 0.6606 Rnf10 RAID03770266 mmu-miR-6342 miRNA MIMAT0025085 Rnf10 mRNA 50849 Prediction 0.1828 Rnf10 RAID03805675 mmu-miR-195a-5p miRNA MIMAT0000225 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6478 Rnf10 RAID03968411 mmu-miR-26a-5p miRNA MIMAT0000533 Rnf10 mRNA 50849 CLIP-seq//Prediction 0.6308 Rnf10 RAID04012436 mmu-miR-133a-3p miRNA MIMAT0000145 Rnf10 mRNA 50849 Prediction 0.1828