DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT585531 mmu-miR-129-5p Mus musculus Trim39 79263 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT585532 mmu-miR-1896 Mus musculus Trim39 79263 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT585533 mmu-miR-3087-3p Mus musculus Trim39 79263 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT602964 mmu-miR-3110-5p Mus musculus Trim39 79263 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT585534 mmu-miR-3470a Mus musculus Trim39 79263 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT602963 mmu-miR-5125 Mus musculus Trim39 79263 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004522 mmu-miR-27b* 79263 Trim39 caAGUGGUU--AG-UCGAU-UCGAGa |||| || || | ||| ||||| gcUCACAAACCUCUAACUACAGCUCc 2 21 82 107 [mm9:17:36400061-36400086:-] 0.5009 126 0 -12.01 -0.1948 MIMAT0000152 mmu-miR-140* 79263 Trim39 ggCACCAAGAUGGGACACCAu ||| |: | ||||||| uuGUGCCUUGA--CUGUGGUu 2 20 1427 1445 [mm9:17:36395874-36395892:-] 0.7020 144 7 -17.71 -0.7058 MIMAT0000152 mmu-miR-140* 79263 Trim39 ggCACCAAGAUGGGACACCAu ||| |: | ||||||| uuGUGCCUUGA--CUGUGGUu 2 20 1427 1445 [mm9:17:36395874-36395892:-] 0.7020 144 7 -17.71 -0.7068 MIMAT0004540 mmu-miR-186* 79263 Trim39 ggguuuuuuAAGUGGAAUCCCg ||| :||||||| uggucucuuUUCUUCUUAGGGu 2 14 572 593 [mm9:17:36396726-36396747:-] 0.5400 153 7 -17.34 -0.7698 MIMAT0004540 mmu-miR-186* 79263 Trim39 ggguuuuuuAAGUGGAAUCCCg ||| :||||||| uggucucuuUUCUUCUUAGGGu 2 14 572 593 [mm9:17:36396726-36396747:-] 0.5400 153 7 -17.34 -0.7700 MIMAT0000217 mmu-miR-188-5p 79263 Trim39 gggaGGUGGUA-CGUUC-CCUAc ::||:|| |:||| |||| cgucUUACUAUGGUAAGCGGAUc 2 18 449 471 [mm9:17:36399697-36399719:-] 0.5734 124 0 -17.51 -0.5613 MIMAT0004541 mmu-miR-188-3p 79263 Trim39 acguUUGGGAC---GUACACCCUc |:||:|| | ||||||| gaauAGCCUUGUUCCUUGUGGGAg 2 18 374 397 [mm9:17:36396922-36396945:-] 0.6118 152 7 -25.92 -0.1895 MIMAT0004541 mmu-miR-188-3p 79263 Trim39 acguUUGGGAC---GUACACCCUc |:||:|| | ||||||| gaauAGCCUUGUUCCUUGUGGGAg 2 18 374 397 [mm9:17:36396922-36396945:-] 0.6118 152 7 -25.92 -0.1896 MIMAT0004542 mmu-miR-191* 79263 Trim39 cccuugCUUUAGGUUCA-CGUCg |||| ::||| |||| gugucgGAAAGAUGAGUGGCAGu 2 17 421 443 [mm9:17:36396876-36396898:-] 0.6118 120 0 -13.84 -0.3389 MIMAT0004542 mmu-miR-191* 79263 Trim39 cccuugCUUUAGGUUCA-CGUCg |||| ::||| |||| gugucgGAAAGAUGAGUGGCAGu 2 17 421 443 [mm9:17:36396876-36396898:-] 0.6118 120 0 -13.84 -0.3391 MIMAT0000234 mmu-miR-201 79263 Trim39 uucuuguuacGGAAUGAC-UCAu |||||||| ||| gagugucccuCCUUACUGUAGUg 2 13 185 207 [mm9:17:36397112-36397134:-] 0.5607 124 0 -17.54 -0.1451 MIMAT0000234 mmu-miR-201 79263 Trim39 uucuuguuacGGAAUGAC-UCAu |||||||| ||| gagugucccuCCUUACUGUAGUg 2 13 185 207 [mm9:17:36397112-36397134:-] 0.5607 124 0 -17.54 -0.1452 MIMAT0004546 mmu-miR-202-5p 79263 Trim39 uuucuucauAUACGUAUCCUu || ||||||| ugcuaucauUACCCAUAGGAu 2 13 596 616 [mm9:17:36396703-36396723:-] 0.5712 144 7 -9.24 -0.2020 MIMAT0004546 mmu-miR-202-5p 79263 Trim39 uuucuucauAUACGUAUCCUu || ||||||| ugcuaucauUACCCAUAGGAu 2 13 596 616 [mm9:17:36396703-36396723:-] 0.5712 144 7 -9.24 -0.2021 MIMAT0004547 mmu-miR-203* 79263 Trim39 acAACUUG--ACAGUUC-UUGGUGa ||||:| | |::|| |||||| ucUUGAGCCAUCUUGAGAAACCACc 2 21 96 120 [mm9:17:36397199-36397223:-] 0.5799 131 6 -15.25 -0.1399 MIMAT0004547 mmu-miR-203* 79263 Trim39 acAACUUG--ACAGUUC-UUGGUGa ||||:| | |::|| |||||| ucUUGAGCCAUCUUGAGAAACCACc 2 21 96 120 [mm9:17:36397199-36397223:-] 0.5799 131 6 -15.25 -0.1400 MIMAT0000240 mmu-miR-207 79263 Trim39 cucCCUCCUCUCGGUCCUCUUCg | | | ||::|||||||| ugaGCAUUAAAGUUAGGAGAAGg 2 21 491 513 [mm9:17:36396806-36396828:-] 0.5192 160 7 -20.88 -0.5089 MIMAT0000240 mmu-miR-207 79263 Trim39 cuccCUCC---UCUCGG-UCCUCUUCg |||| ||| :: :||||||| gccaGAGGUUCAGAUUUGGGGAGAAGg 2 20 619 645 [mm9:17:36396674-36396700:-] 0.5712 149 7 -19.89 -0.2313 MIMAT0000240 mmu-miR-207 79263 Trim39 cucccUCCUCUCGGUCC-UCUUCg | |||| | :|| ||||| cacccAUGAGAACAGGGUAGAAGa 2 19 1112 1135 [mm9:17:36396184-36396207:-] 0.6096 126 0 -16.01 -0.2228 MIMAT0000240 mmu-miR-207 79263 Trim39 cucCCUCCUCUCGGUCCUCUUCg | | | ||::|||||||| ugaGCAUUAAAGUUAGGAGAAGg 2 21 491 513 [mm9:17:36396806-36396828:-] 0.5192 160 7 -20.88 -0.5091 MIMAT0000240 mmu-miR-207 79263 Trim39 cuccCUCC---UCUCGG-UCCUCUUCg |||| ||| :: :||||||| gccaGAGGUUCAGAUUUGGGGAGAAGg 2 20 619 645 [mm9:17:36396674-36396700:-] 0.5712 149 7 -19.89 -0.2314 MIMAT0000240 mmu-miR-207 79263 Trim39 cucccUCCUCUCGGUCC-UCUUCg | |||| | :|| ||||| cacccAUGAGAACAGGGUAGAAGa 2 19 1112 1135 [mm9:17:36396184-36396207:-] 0.6096 126 0 -16.01 -0.2229 MIMAT0000375 mmu-miR-297a 79263 Trim39 ugUACGU--GUACG-UGUGUAUGUa | ||| | ||| | ||||||| ggAAGCAAUCCUGCAAGACAUACAu 2 21 759 783 [mm9:17:36396536-36396560:-] 0.5235 154 7 -17.17 -0.1132 MIMAT0000375 mmu-miR-297a 79263 Trim39 uguacguguacgUGUGUAUGUa | ||||||| ucaaaaagaaaaAGACAUACAu 2 11 912 933 [mm9:17:36396386-36396407:-] 0.5495 142 7 -10.80 -0.3997 MIMAT0000375 mmu-miR-297a 79263 Trim39 ugUACGU--GUACG-UGUGUAUGUa | ||| | ||| | ||||||| ggAAGCAAUCCUGCAAGACAUACAu 2 21 759 783 [mm9:17:36396536-36396560:-] 0.5235 154 7 -17.17 -0.1133 MIMAT0000375 mmu-miR-297a 79263 Trim39 uguacguguacgUGUGUAUGUa | ||||||| ucaaaaagaaaaAGACAUACAu 2 11 912 933 [mm9:17:36396386-36396407:-] 0.5495 142 7 -10.80 -0.3999 MIMAT0000375 mmu-miR-297a 79263 Trim39 uguaCGUGUA-CGUGUGUAUGUa |||| | |::|||||||| gcucGCACCUGGUGCACAUACAu 2 19 144 166 [mm9:17:36400002-36400024:-] 0.5009 165 7 -20.86 -0.2694 MIMAT0000375 mmu-miR-297a 79263 Trim39 ugUACGU--GUAC-GUGUGUAUGUa ||||| || | ||| |||||| acAUGCAAGCAAGACACUCAUACAc 2 21 176 200 [mm9:17:36399968-36399992:-] 0.5009 138 6 -19.00 -0.1115 MIMAT0000384 mmu-let-7d* 79263 Trim39 ucuuuccGUCGUCCAG-CAUAUc ||| :|||| ||||| gagcgcaCAG-GGGUCUGUAUAc 2 16 395 416 [mm9:17:36396903-36396924:-] 0.6118 121 0 -15.67 -0.1022 MIMAT0000384 mmu-let-7d* 79263 Trim39 ucuuuccGUCGUCCAG-CAUAUc ||| :|||| ||||| gagcgcaCAG-GGGUCUGUAUAc 2 16 395 416 [mm9:17:36396903-36396924:-] 0.6118 121 0 -15.67 -0.1023 MIMAT0004617 mmu-miR-148a* 79263 Trim39 ucagccucaCAGAGUCUUGAAa ||| :||||||| uacuuugcaGUCCUAGAACUUa 2 14 326 347 [mm9:17:36399821-36399842:-] 0.5382 153 7 -13.19 -0.6374 MIMAT0004620 mmu-let-7a* 79263 Trim39 ccuuucugucaucuaACAUAUc |||||| aaucuuuuuuuuuaaUGUAUAu 2 8 204 225 [mm9:17:36399943-36399964:-] 0.5238 120 6 -3.03 -0.1929 MIMAT0004621 mmu-let-7b* 79263 Trim39 cccuuccgucauccaACAUAUc |||||| aaucuuuuuuuuuaaUGUAUAu 2 8 204 225 [mm9:17:36399943-36399964:-] 0.5238 120 6 -3.03 -0.1929 MIMAT0005439 mmu-let-7c-2* 79263 Trim39 ccuuucugucaucuaACAUAUc |||||| aaucuuuuuuuuuaaUGUAUAu 2 8 204 225 [mm9:17:36399943-36399964:-] 0.5238 120 6 -3.03 -0.1929 MIMAT0004623 mmu-let-7f* 79263 Trim39 ccCUUCCGU-UAUCUA-ACAUAUc ||: ||| | :|:| |||||| ggGAGCGCACAGGGGUCUGUAUAc 2 21 393 416 [mm9:17:36396903-36396926:-] 0.6118 127 6 -17.42 -0.1043 MIMAT0004623 mmu-let-7f* 79263 Trim39 ccCUUCCGU-UAUCUA-ACAUAUc ||: ||| | :|:| |||||| ggGAGCGCACAGGGGUCUGUAUAc 2 21 393 416 [mm9:17:36396903-36396926:-] 0.6118 127 6 -17.42 -0.1043 MIMAT0004623 mmu-let-7f* 79263 Trim39 cccuuccguuaucuaACAUAUc |||||| aaucuuuuuuuuuaaUGUAUAu 2 8 204 225 [mm9:17:36399943-36399964:-] 0.5238 120 6 -3.03 -0.1929 MIMAT0004627 mmu-miR-20a* 79263 Trim39 gaAAUU-CACGAGCAUUACGUCa |||| ||||: ||||||| ucUUAACUUGCUUAAAAUGCAGg 2 21 318 340 [mm9:17:36396979-36397001:-] 0.5686 163 7 -15.31 -0.4336 MIMAT0004627 mmu-miR-20a* 79263 Trim39 gaAAUU-CACGAGCAUUACGUCa |||| ||||: ||||||| ucUUAACUUGCUUAAAAUGCAGg 2 21 318 340 [mm9:17:36396979-36397001:-] 0.5686 163 7 -15.31 -0.4338 MIMAT0004627 mmu-miR-20a* 79263 Trim39 gaAAUUCACGAGCA-UUACGUCa | || :|:|| ||||||| acUCAAAAUUUUGUAAAUGCAGu 2 21 297 319 [mm9:17:36399849-36399871:-] 0.5467 151 7 -14.28 -1.0263 MIMAT0004630 mmu-miR-26b* 79263 Trim39 cucgguucauUACCUCUUGUCc || |||||||| uuucucacccAU-GAGAACAGg 2 13 1107 1127 [mm9:17:36396192-36396212:-] 0.6096 146 7 -17.12 -0.2059 MIMAT0004630 mmu-miR-26b* 79263 Trim39 cucgguucauUACCUCUUGUCc || |||||||| uuucucacccAU-GAGAACAGg 2 13 1107 1127 [mm9:17:36396192-36396212:-] 0.6096 146 7 -17.12 -0.2060 MIMAT0004632 mmu-miR-29c* 79263 Trim39 cuugugguccUCUUUAGCCAGu | | ||||||| agaaaaagacAUACAUCGGUCc 2 13 918 939 [mm9:17:36396380-36396401:-] 0.5495 144 7 -12.00 -0.3820 MIMAT0004632 mmu-miR-29c* 79263 Trim39 cuugugguccUCUUUAGCCAGu | | ||||||| agaaaaagacAUACAUCGGUCc 2 13 918 939 [mm9:17:36396380-36396401:-] 0.5495 144 7 -12.00 -0.3822 MIMAT0000551 mmu-miR-323-3p 79263 Trim39 ucuccagcuggcacAUUACAc |||||| uaaaucuuuuuuuuUAAUGUa 2 8 202 222 [mm9:17:36399946-36399966:-] 0.5238 120 6 -2.82 -0.3026 MIMAT0000569 mmu-miR-330* 79263 Trim39 agAGACGUCCG-GGACACGAAACg ||| || : : ||||||||| ugUCUUCAUUUGUGUGUGCUUUGc 2 22 563 586 [mm9:17:36399582-36399605:-] 0.5865 156 7 -18.62 -0.5839 MIMAT0000571 mmu-miR-331-3p 79263 Trim39 aagaUCCUAUCCGGGUCCCCg || : | |||||||| ggagAGUGGACUCCCAGGGGa 2 18 208 228 [mm9:17:36397091-36397111:-] 0.6050 149 7 -23.54 -0.2821 MIMAT0000571 mmu-miR-331-3p 79263 Trim39 aagaUCCUAUCCGGGUCCCCg || : | |||||||| ggagAGUGGACUCCCAGGGGa 2 18 208 228 [mm9:17:36397091-36397111:-] 0.6050 149 7 -23.54 -0.2823 MIMAT0000578 mmu-miR-337-3p 79263 Trim39 ucCGUAGUAUAUCCU-CGACUu | |||| : | || ||||| aaGGAUCAGGGAAGAGGCUGAa 2 20 510 531 [mm9:17:36396788-36396809:-] 0.5192 123 0 -19.00 -0.2869 MIMAT0000578 mmu-miR-337-3p 79263 Trim39 ucCGUAGUAUAUCCU-CGACUu | |||| : | || ||||| aaGGAUCAGGGAAGAGGCUGAa 2 20 510 531 [mm9:17:36396788-36396809:-] 0.5192 123 0 -19.00 -0.2870 MIMAT0000650 mmu-miR-17* 79263 Trim39 gauguucacgggagUGACGUCa ||||||| gacugagacaagaaACUGCAGu 2 9 1347 1368 [mm9:17:36395951-36395972:-] 0.6140 140 7 -16.81 -0.4977 MIMAT0000650 mmu-miR-17* 79263 Trim39 gauguucacgggagUGACGUCa ||||||| gacugagacaagaaACUGCAGu 2 9 1347 1368 [mm9:17:36395951-36395972:-] 0.6140 140 7 -16.81 -0.4979 MIMAT0000650 mmu-miR-17* 79263 Trim39 gauGUU-CACGGGAGUGACGUca ||: | | : |||||||| aguCAGUGAGGUAUCACUGCAca 3 20 502 524 [mm9:17:36399644-36399666:-] 0.5759 134 0 -21.88 -0.1092 MIMAT0004664 mmu-miR-214* 79263 Trim39 cguGUCGUUCACAUCUGUCCGu |:| |:| |||||||| accCGGGAGGCAGAGACAGGCg 2 20 805 826 [mm9:17:36396493-36396514:-] 0.4988 155 7 -24.67 -0.2092 MIMAT0004664 mmu-miR-214* 79263 Trim39 cguGUCGUUCACAUCUGUCCGu |:| |:| |||||||| accCGGGAGGCAGAGACAGGCg 2 20 805 826 [mm9:17:36396493-36396514:-] 0.4988 155 7 -24.67 -0.2093 MIMAT0000742 mmu-miR-378* 79263 Trim39 ugUGUCCUGGACCUCAGUC-CUc || || :| ||||||| || ucACUGGCAUUUGAGUCAGUGAg 2 21 489 511 [mm9:17:36399657-36399679:-] 0.5759 128 0 -26.15 -0.2392 MIMAT0001421 mmu-miR-434-5p 79263 Trim39 accaAGUUUGGUACUCAGCUCg | |: |:| ||||||| gucaUGAGUCUAGAAGUCGAGg 2 19 448 469 [mm9:17:36396850-36396871:-] 0.5655 150 7 -15.79 -0.2558 MIMAT0001421 mmu-miR-434-5p 79263 Trim39 accaAGUUUGGUACUCAGCUCg | |: |:| ||||||| gucaUGAGUCUAGAAGUCGAGg 2 19 448 469 [mm9:17:36396850-36396871:-] 0.5655 150 7 -15.79 -0.2559 MIMAT0002105 mmu-miR-464 79263 Trim39 auAGAGUGUCUU-AUUUGA-ACCAu || || :|:| |: ||| |||| acUCCCAGGGGAUUGUACUCUGGUg 2 22 217 241 [mm9:17:36397078-36397102:-] 0.6050 124 0 -18.25 -0.1062 MIMAT0002105 mmu-miR-464 79263 Trim39 auAGAGUGUCUU-AUUUGA-ACCAu || || :|:| |: ||| |||| acUCCCAGGGGAUUGUACUCUGGUg 2 22 217 241 [mm9:17:36397078-36397102:-] 0.6050 124 0 -18.25 -0.1063 MIMAT0004759 mmu-miR-466a-5p 79263 Trim39 auacauguacauGUGUGUGUAu ||:|||||| aagcaagacacuCAUACACAUa 2 11 182 203 [mm9:17:36399965-36399986:-] 0.5009 134 6 -15.09 -0.2075 MIMAT0002107 mmu-miR-466a-3p 79263 Trim39 agaauacacacgcacaUACAUAu |||||| uaaaucuuuuuuuuuaAUGUAUa 2 8 202 224 [mm9:17:36399944-36399966:-] 0.5238 120 6 -5.93 -0.3417 MIMAT0002108 mmu-miR-467a-1* 79263 Trim39 cacauccACACACAUACAUAUa | | | ||||||| aaucuuuUUUUUUAAUGUAUAu 2 16 204 225 [mm9:17:36399943-36399964:-] 0.5238 143 7 -6.84 -1.2148 MIMAT0002110 mmu-miR-469 79263 Trim39 ccuguggUUCUAGUUACUUUCUCCGu |:|||||: |:||||||| uaggagaAGGAUCAG-GGAAGAGGCu 2 20 504 528 [mm9:17:36396791-36396815:-] 0.5192 169 7 -28.22 -0.1547 MIMAT0002110 mmu-miR-469 79263 Trim39 ccuguggUUCUAGUUACUUUCUCCGu |:|||||: |:||||||| uaggagaAGGAUCAG-GGAAGAGGCu 2 20 504 528 [mm9:17:36396791-36396815:-] 0.5192 169 7 -28.22 -0.1548 MIMAT0004781 mmu-miR-532-3p 79263 Trim39 acguUCGGAAC---CCACACCCUCc ||||||| |||||||| gaauAGCCUUGUUCCUUGUGGGAGc 2 19 374 398 [mm9:17:36396921-36396945:-] 0.6118 157 7 -24.76 -0.1766 MIMAT0004781 mmu-miR-532-3p 79263 Trim39 acguucGGAA-CCCA-CACCCUCc |||| || ||||||| gucccuCCUUACUGUAGUGGGAGa 2 17 189 212 [mm9:17:36397107-36397130:-] 0.5607 146 7 -18.47 -0.4871 MIMAT0004781 mmu-miR-532-3p 79263 Trim39 acguUCGGAAC---CCACACCCUCc ||||||| |||||||| gaauAGCCUUGUUCCUUGUGGGAGc 2 19 374 398 [mm9:17:36396921-36396945:-] 0.6118 157 7 -24.76 -0.1767 MIMAT0004781 mmu-miR-532-3p 79263 Trim39 acguucGGAA-CCCA-CACCCUCc |||| || ||||||| gucccuCCUUACUGUAGUGGGAGa 2 17 189 212 [mm9:17:36397107-36397130:-] 0.5607 146 7 -18.47 -0.4873 MIMAT0004788 mmu-miR-20b* 79263 Trim39 gaucuucacgagUGUGACGUCa | ||||||| gacugagacaagAAACUGCAGu 2 11 1347 1368 [mm9:17:36395951-36395972:-] 0.6140 142 7 -15.37 -0.4977 MIMAT0004788 mmu-miR-20b* 79263 Trim39 gaucuucacgagUGUGACGUCa | ||||||| gacugagacaagAAACUGCAGu 2 11 1347 1368 [mm9:17:36395951-36395972:-] 0.6140 142 7 -15.37 -0.4979 MIMAT0004788 mmu-miR-20b* 79263 Trim39 gaucuuCACGAGUGUGACGUca | | | ||||||| gucaguGAGGUAUCACUGCAca 3 17 503 524 [mm9:17:36399644-36399665:-] 0.5759 128 0 -15.65 -0.1092 MIMAT0003190 mmu-miR-291b-3p 79263 Trim39 ugUUUGUUUUACCUACGUGAaa |:|:| | || |||||| agAGAUACACUG--UGCACUca 3 21 282 301 [mm9:17:36399867-36399886:-] 0.5467 133 0 -8.42 -0.1183 MIMAT0003726 mmu-miR-675-3p 79263 Trim39 ugacucgccaaucccGUAUGUc |||||| ugcaagcaagacacuCAUACAc 2 8 179 200 [mm9:17:36399968-36399989:-] 0.5009 120 6 -6.73 -0.1138 MIMAT0003736 mmu-miR-670 79263 Trim39 aagugguguaugugAGUCCCUa ||||||| aguuaggagaaggaUCAGGGAa 2 9 501 522 [mm9:17:36396797-36396818:-] 0.5192 140 7 -11.62 -0.5993 MIMAT0003736 mmu-miR-670 79263 Trim39 aagugguguaugugAGUCCCUa ||||||| aguuaggagaaggaUCAGGGAa 2 9 501 522 [mm9:17:36396797-36396818:-] 0.5192 140 7 -11.62 -0.5995 MIMAT0003740 mmu-miR-674 79263 Trim39 auguggugaggguaGAGUCACg ||||||| agcuagagagauggCUCAGUGg 2 9 1 22 [mm9:17:36400146-36400167:-] 0.5024 140 7 -12.58 -0.1138 MIMAT0003468 mmu-miR-689 79263 Trim39 ccuGGGGCGGCUCGCCCCUGc :||: :| ||||||| guuUCCUAGUGCACGGGGACa 2 19 250 270 [mm9:17:36397049-36397069:-] 0.5868 146 7 -20.91 -0.3228 MIMAT0003468 mmu-miR-689 79263 Trim39 ccuGGGGCGGCUCGCCCCUGc :||: :| ||||||| guuUCCUAGUGCACGGGGACa 2 19 250 270 [mm9:17:36397049-36397069:-] 0.5868 146 7 -20.91 -0.3230 MIMAT0003469 mmu-miR-690 79263 Trim39 aaaccaACACU-CG---GAUCGGAAa ||||| || ||||||| ggcuucUGUGACGCAGAAUAGCCUUg 2 17 359 384 [mm9:17:36396935-36396960:-] 0.5902 146 7 -17.80 -0.2918 MIMAT0003469 mmu-miR-690 79263 Trim39 aaaccaACACU-CG---GAUCGGAAa ||||| || ||||||| ggcuucUGUGACGCAGAAUAGCCUUg 2 17 359 384 [mm9:17:36396935-36396960:-] 0.5902 146 7 -17.80 -0.2920 MIMAT0003470 mmu-miR-691 79263 Trim39 aaaagACGGAGAGAAGUC-CUUa | || ||:||||| ||| ugacaUUCCCCUUUUCAGAGAAu 2 18 1198 1220 [mm9:17:36396099-36396121:-] 0.6096 129 0 -17.14 -0.9930 MIMAT0003470 mmu-miR-691 79263 Trim39 aaaagACGGAGAGAAGUC-CUUa | || ||:||||| ||| ugacaUUCCCCUUUUCAGAGAAu 2 18 1198 1220 [mm9:17:36396099-36396121:-] 0.6096 129 0 -17.14 -0.9932 MIMAT0003474 mmu-miR-694 79263 Trim39 gaaguccguuguAAAAGUc |||||| aaaagaucauucUUUUCAg 2 8 241 259 [mm9:17:36399909-36399927:-] 0.5467 120 6 -7.85 -0.1406 MIMAT0003478 mmu-miR-467b* 79263 Trim39 cacaaccACACACAUACAUAUa | | | ||||||| aaucuuuUUUUUUAAUGUAUAu 2 16 204 225 [mm9:17:36399943-36399964:-] 0.5238 143 7 -6.84 -1.2148 MIMAT0003480 mmu-miR-297b-5p 79263 Trim39 uguacaAGUACG-UGUGUAUGUa || ||| | ||||||| aagcaaUCCUGCAAGACAUACAu 2 17 761 783 [mm9:17:36396536-36396558:-] 0.5235 155 7 -15.26 -0.1109 MIMAT0003480 mmu-miR-297b-5p 79263 Trim39 uguacaaguacgUGUGUAUGUa | ||||||| ucaaaaagaaaaAGACAUACAu 2 11 912 933 [mm9:17:36396386-36396407:-] 0.5495 142 7 -10.63 -0.4059 MIMAT0003480 mmu-miR-297b-5p 79263 Trim39 uguacaAGUACG-UGUGUAUGUa || ||| | ||||||| aagcaaUCCUGCAAGACAUACAu 2 17 761 783 [mm9:17:36396536-36396558:-] 0.5235 155 7 -15.26 -0.1110 MIMAT0003480 mmu-miR-297b-5p 79263 Trim39 uguacaaguacgUGUGUAUGUa | ||||||| ucaaaaagaaaaAGACAUACAu 2 11 912 933 [mm9:17:36396386-36396407:-] 0.5495 142 7 -10.63 -0.4061 MIMAT0003480 mmu-miR-297b-5p 79263 Trim39 uguaCAAGUACGUGUGUAUGUa || || ||:||||||| ccugGUGCA--CAUACAUACAa 2 19 151 170 [mm9:17:36399998-36400017:-] 0.5009 155 7 -14.67 -1.0432 MIMAT0003480 mmu-miR-297b-5p 79263 Trim39 uguacaaGUAC-GUGUGUAUGUa || | ||| |||||| augcaagCAAGACACUCAUACAc 2 16 178 200 [mm9:17:36399968-36399990:-] 0.5009 126 6 -11.27 -0.1115 MIMAT0004827 mmu-miR-297b-3p 79263 Trim39 auacccauacacacaUACAUAu |||||| aaaucuuuuuuuuuaAUGUAUa 2 8 203 224 [mm9:17:36399944-36399965:-] 0.5238 120 6 -5.93 -0.3389 MIMAT0003492 mmu-miR-702 79263 Trim39 cucgccccaUUUCCCACCCGu |::|||||||| agugcccaaAGGGGGUGGGCu 2 13 356 376 [mm9:17:36399792-36399812:-] 0.5296 152 7 -23.70 -0.3654 MIMAT0003499 mmu-miR-709 79263 Trim39 agGAGGACGGAGA-CGGAGg | || |:|||| ||||| uaCACC-GUCUCUGGCCUCu 2 18 116 134 [mm9:17:36400034-36400052:-] 0.5009 123 0 -22.90 -0.1652 MIMAT0003502 mmu-miR-712 79263 Trim39 ccauggcgggCCCACUUCCUc || ||||||| ucagggaagaGGCUGAAGGAa 2 12 515 535 [mm9:17:36396784-36396804:-] 0.5192 147 7 -15.11 -0.3023 MIMAT0003502 mmu-miR-712 79263 Trim39 ccauggcgggCCCACUUCCUc || ||||||| ucagggaagaGGCUGAAGGAa 2 12 515 535 [mm9:17:36396784-36396804:-] 0.5192 147 7 -15.11 -0.3024 MIMAT0003508 mmu-miR-501-5p 79263 Trim39 aaaguggguCCCUGUUUCCUAa || ||||||||| ugaaaauauGGAACAAAGGAUc 2 14 1470 1491 [mm9:17:36395828-36395849:-] 0.6694 157 7 -14.61 -0.7241 MIMAT0003508 mmu-miR-501-5p 79263 Trim39 aaagUGGGUCCCU----GUUUCCUAa |::::|||| ||||||| ucagAUUUGGGGAGAAGGAAAGGAUg 2 19 628 653 [mm9:17:36396666-36396691:-] 0.5712 145 7 -15.87 -0.1202 MIMAT0003508 mmu-miR-501-5p 79263 Trim39 aaaguggguCCCUGUUUCCUAa || ||||||||| ugaaaauauGGAACAAAGGAUc 2 14 1470 1491 [mm9:17:36395828-36395849:-] 0.6694 157 7 -14.61 -0.6622 MIMAT0003508 mmu-miR-501-5p 79263 Trim39 aaagUGGGUCCCU----GUUUCCUAa |::::|||| ||||||| ucagAUUUGGGGAGAAGGAAAGGAUg 2 19 628 653 [mm9:17:36396666-36396691:-] 0.5712 145 7 -15.87 -0.1203 MIMAT0003508 mmu-miR-501-5p 79263 Trim39 aaagugggucccUGUUUCCUAa |:||||||| ugggcuuauaauAUAAAGGAUa 2 11 371 392 [mm9:17:36399776-36399797:-] 0.5296 146 7 -11.48 -1.1129 MIMAT0003510 mmu-miR-717 79263 Trim39 ucUCUUCCAUAGAGACAG-ACUc || :| :|: ||||| ||| ugAGUGGCAGUUGCUGUCAUGAg 2 21 433 455 [mm9:17:36396864-36396886:-] 0.6118 120 0 -19.06 -0.3666 MIMAT0003510 mmu-miR-717 79263 Trim39 ucUCUUCCAUAGAGACAG-ACUc || :| :|: ||||| ||| ugAGUGGCAGUUGCUGUCAUGAg 2 21 433 455 [mm9:17:36396864-36396886:-] 0.6118 120 0 -19.06 -0.3668 MIMAT0003512 mmu-miR-450b-3p 79263 Trim39 uacGUACGUUUUACAAGGGUUa | | || :| ||||||| gucCUUCCAUUGU-UUCCCAAg 2 20 936 956 [mm9:17:36396363-36396383:-] 0.5989 145 7 -10.26 -0.2527 MIMAT0003512 mmu-miR-450b-3p 79263 Trim39 uacGUACGUUUUACAAGGGUUa | | || :| ||||||| gucCUUCCAUUGU-UUCCCAAg 2 20 936 956 [mm9:17:36396363-36396383:-] 0.5989 145 7 -10.26 -0.2529 MIMAT0004238 mmu-miR-743a 79263 Trim39 agAUGAGUCGAAC-CACA-GAAAg | :||| :||| |||| |||| ugUCUUCA-UUUGUGUGUGCUUUg 2 21 563 585 [mm9:17:36399583-36399605:-] 0.5865 125 0 -12.68 -0.7845 MIMAT0004844 mmu-miR-880 79263 Trim39 agaugagucUCUCCUACCUCAu ||: |||||||| aagaagggaAGGUGAUGGAGUc 2 14 1085 1106 [mm9:17:36396213-36396234:-] 0.6096 153 7 -17.31 -0.1649 MIMAT0004844 mmu-miR-880 79263 Trim39 agaugagucUCUCCUACCUCAu ||: |||||||| aagaagggaAGGUGAUGGAGUc 2 14 1085 1106 [mm9:17:36396213-36396234:-] 0.6096 153 7 -17.31 -0.1650 MIMAT0004849 mmu-miR-883a-3p 79263 Trim39 uaugacucucgaCAACGUCAAu | ||||||| -------caagaGAUGCAGUUu 2 11 1 15 [mm9:17:36397304-36397318:-] 0.5167 142 7 -13.61 -0.1534 MIMAT0004849 mmu-miR-883a-3p 79263 Trim39 uaUGACUCU--CGACA---ACGUCAAu ||| | | :||| ||||||| gcACUCAAAAUUUUGUAAAUGCAGUUa 2 21 295 321 [mm9:17:36399847-36399873:-] 0.5467 142 7 -12.22 -1.1593 MIMAT0004851 mmu-miR-883b-3p 79263 Trim39 uaugacucUCUACAACGUCAAu ||| | ||||||| ------caAGA-GAUGCAGUUu 2 15 1 15 [mm9:17:36397304-36397318:-] 0.5167 148 7 -14.27 -0.1519 MIMAT0004851 mmu-miR-883b-3p 79263 Trim39 uaugacucucuacaACGUCAAu ||||||| caaaauuuuguaaaUGCAGUUa 2 9 300 321 [mm9:17:36399847-36399868:-] 0.5467 140 7 -10.27 -1.1574 MIMAT0004856 mmu-miR-105 79263 Trim39 ugGUGUUCGUAG-ACUCGUGAACc | ||: :|| ||||||||| ggCUCAGUGGUCAAGAGCACUUGc 2 22 13 36 [mm9:17:36400132-36400155:-] 0.5024 156 7 -18.35 -0.1499 MIMAT0004863 mmu-miR-220 79263 Trim39 uuCACAGACUGU-GACAC-CACc |||||| || :|||| ||| cuGUGUCU-UCAUUUGUGUGUGc 2 20 560 581 [mm9:17:36399587-36399608:-] 0.5865 124 0 -18.51 -1.0542 MIMAT0004864 mmu-miR-297a* 79263 Trim39 auacccauacacacaUACAUAu |||||| aaaucuuuuuuuuuaAUGUAUa 2 8 203 224 [mm9:17:36399944-36399965:-] 0.5238 120 6 -5.93 -0.3389 MIMAT0004865 mmu-miR-297c 79263 Trim39 uguacauGUACG-UGUGUAUGUa | ||| | ||||||| aagcaauCCUGCAAGACAUACAu 2 16 761 783 [mm9:17:36396536-36396558:-] 0.5235 150 7 -14.07 -0.1120 MIMAT0004865 mmu-miR-297c 79263 Trim39 uguacauguacgUGUGUAUGUa | ||||||| ucaaaaagaaaaAGACAUACAu 2 11 912 933 [mm9:17:36396386-36396407:-] 0.5495 142 7 -10.63 -0.3997 MIMAT0004865 mmu-miR-297c 79263 Trim39 uguacauGUACG-UGUGUAUGUa | ||| | ||||||| aagcaauCCUGCAAGACAUACAu 2 16 761 783 [mm9:17:36396536-36396558:-] 0.5235 150 7 -14.07 -0.1121 MIMAT0004865 mmu-miR-297c 79263 Trim39 uguacauguacgUGUGUAUGUa | ||||||| ucaaaaagaaaaAGACAUACAu 2 11 912 933 [mm9:17:36396386-36396407:-] 0.5495 142 7 -10.63 -0.3999 MIMAT0004865 mmu-miR-297c 79263 Trim39 uguaCAUGUACGUGUGUAUGUa ||:|| ||:||||||| ccugGUGCA--CAUACAUACAa 2 19 151 170 [mm9:17:36399998-36400017:-] 0.5009 159 7 -17.94 -1.0432 MIMAT0004865 mmu-miR-297c 79263 Trim39 ugUACAU--GUAC-GUGUGUAUGUa ||| | || | ||| |||||| acAUGCAAGCAAGACACUCAUACAc 2 21 176 200 [mm9:17:36399968-36399992:-] 0.5009 130 6 -15.75 -0.1115 MIMAT0004866 mmu-miR-297c* 79263 Trim39 auacccauacacacaUACAUAu |||||| aaaucuuuuuuuuuaAUGUAUa 2 8 203 224 [mm9:17:36399944-36399965:-] 0.5238 120 6 -5.93 -0.3389 MIMAT0004875 mmu-miR-466b-5p 79263 Trim39 guacauguacauGUGUGUGUAg ||:|||||| aagcaagacacuCAUACACAUa 2 11 182 203 [mm9:17:36399965-36399986:-] 0.5009 134 6 -14.78 -0.2075 MIMAT0004876 mmu-miR-466b-3p 79263 Trim39 agaauacacacgcacaUACAUAu |||||| uaaaucuuuuuuuuuaAUGUAUa 2 8 202 224 [mm9:17:36399944-36399966:-] 0.5238 120 6 -5.93 -0.3417 MIMAT0005453 mmu-miR-466b-3-3p 79263 Trim39 agaauacacacgcacaUACAUAa |||||| uaaaucuuuuuuuuuaAUGUAUa 2 8 202 224 [mm9:17:36399944-36399966:-] 0.5238 120 6 -3.67 -0.3417 MIMAT0004877 mmu-miR-466c-5p 79263 Trim39 auacaUGUACGUGUGUGUGUAg ||| | ||:|||||| gcaagACA--CUCAUACACAUa 2 18 184 203 [mm9:17:36399965-36399984:-] 0.5009 138 6 -15.31 -0.2056 MIMAT0004878 mmu-miR-466c-3p 79263 Trim39 agaauacacacgcacaUACAUAu |||||| uaaaucuuuuuuuuuaAUGUAUa 2 8 202 224 [mm9:17:36399944-36399966:-] 0.5238 120 6 -5.93 -0.3417 MIMAT0004879 mmu-miR-466e-5p 79263 Trim39 auacauguacauGUGUGUGUAg ||:|||||| aagcaagacacuCAUACACAUa 2 11 182 203 [mm9:17:36399965-36399986:-] 0.5009 134 6 -13.59 -0.2075 MIMAT0004880 mmu-miR-466e-3p 79263 Trim39 agaauacacacgcacaUACAUAu |||||| uaaaucuuuuuuuuuaAUGUAUa 2 8 202 224 [mm9:17:36399944-36399966:-] 0.5238 120 6 -5.93 -0.3417 MIMAT0004887 mmu-miR-467d* 79263 Trim39 cacauccACACACAUACAUAUa | | | ||||||| aaucuuuUUUUUUAAUGUAUAu 2 16 204 225 [mm9:17:36399943-36399964:-] 0.5238 143 7 -6.84 -1.2148 MIMAT0004893 mmu-miR-574-5p 79263 Trim39 ugUGUGAGUGUGUGUGUGUGAGu |||: || :|| | |||||| auACAUGCAAGCA-AGACACUCa 2 22 174 195 [mm9:17:36399973-36399994:-] 0.5009 135 6 -18.97 -0.2116 MIMAT0004893 mmu-miR-574-5p 79263 Trim39 ugUGUGAGUGUGUGUGUGUGAGu |::: :|:| |: :|||||| uaAUGUAUAUA-AUUUACACUCa 2 22 216 237 [mm9:17:36399931-36399952:-] 0.5467 135 6 -16.79 -0.5280 MIMAT0004898 mmu-miR-654-3p 79263 Trim39 uuccacuACC--AGUCGUCUGUAu ||| || ||||||| ccgucucUGGCCUCUUCAGACAUu 2 16 120 143 [mm9:17:36400025-36400048:-] 0.5009 146 7 -12.92 -0.3500 MIMAT0004931 mmu-miR-466d-3p 79263 Trim39 gauacacacgcacaUACAUAu |||||| aaucuuuuuuuuuaAUGUAUa 2 8 204 224 [mm9:17:36399944-36399964:-] 0.5238 120 6 -5.93 -0.3417 MIMAT0004933 mmu-miR-878-3p 79263 Trim39 agauggGUCACACCACAGUACg |||| || ||||||| gaguggCAGU-UGCUGUCAUGa 2 17 434 454 [mm9:17:36396865-36396885:-] 0.6118 158 7 -17.21 -0.2461 MIMAT0004933 mmu-miR-878-3p 79263 Trim39 agauggGUCACACCACAGUACg |||| || ||||||| gaguggCAGU-UGCUGUCAUGa 2 17 434 454 [mm9:17:36396865-36396885:-] 0.6118 158 7 -17.21 -0.2462 MIMAT0004938 mmu-miR-875-3p 79263 Trim39 guaucggagucauAAAAGUCc ||||||| uuugacauuccccUUUUCAGa 2 9 1196 1216 [mm9:17:36396103-36396123:-] 0.6096 140 7 -9.36 -0.5731 MIMAT0004938 mmu-miR-875-3p 79263 Trim39 guaucggagucauAAAAGUCc ||||||| uuugacauuccccUUUUCAGa 2 9 1196 1216 [mm9:17:36396103-36396123:-] 0.6096 140 7 -9.36 -0.5734 MIMAT0004938 mmu-miR-875-3p 79263 Trim39 guaucggAGUCAUAAAAGUCc ||| | ||||||| aaaaagaUCAUUCUUUUCAGa 2 15 240 260 [mm9:17:36399908-36399928:-] 0.5467 154 7 -9.23 -1.0235 MIMAT0005292 mmu-miR-582-3p 79263 Trim39 aacccaagucaacaAGUUGUCc ||||||| uuccuccuaccaccUCAACAGg 2 9 1381 1402 [mm9:17:36395917-36395938:-] 0.6580 140 7 -12.40 -0.2763 MIMAT0005292 mmu-miR-582-3p 79263 Trim39 aacccaagucaacaAGUUGUCc ||||||| uuccuccuaccaccUCAACAGg 2 9 1381 1402 [mm9:17:36395917-36395938:-] 0.6580 140 7 -12.40 -0.2765 MIMAT0005293 mmu-miR-467e 79263 Trim39 ugUAUAUGUA-CGAGUGUGAAUa ||:||:|| :|:||||| | uaAUGUAUAUAAUUUACACUCAa 2 21 216 238 [mm9:17:36399930-36399952:-] 0.5467 135 0 -14.00 -0.1932 MIMAT0005294 mmu-miR-467e* 79263 Trim39 uauauccACACACAUACAUAUa | | | ||||||| aaucuuuUUUUUUAAUGUAUAu 2 16 204 225 [mm9:17:36399943-36399964:-] 0.5238 143 7 -6.84 -1.2148 MIMAT0005833 mmu-miR-669d 79263 Trim39 uguaUAUGUACGUGUGUGUUCa :|| || : |||||||| cuggGUA-AUCUUCACACAAGa 2 19 1328 1348 [mm9:17:36395971-36395991:-] 0.6140 152 7 -13.07 -0.6420 MIMAT0005833 mmu-miR-669d 79263 Trim39 uguaUAUGUACGUGUGUGUUCa :|| || : |||||||| cuggGUA-AUCUUCACACAAGa 2 19 1328 1348 [mm9:17:36395971-36395991:-] 0.6140 152 7 -13.07 -0.6423 MIMAT0005837 mmu-miR-1187 79263 Trim39 aaUGUGUGUAUGUGUGUGUGUAu :|| | | || ||:|||||| aaGCA-AGACACUCAUACACAUa 2 22 182 203 [mm9:17:36399965-36399986:-] 0.5009 147 6 -19.38 -0.2056 MIMAT0005839 mmu-miR-669f 79263 Trim39 uauGCACACACACAUACAUAUAc | | | | | |||||||| aauCUUUUUUUUUAAUGUAUAUa 2 21 204 226 [mm9:17:36399942-36399964:-] 0.5238 152 7 -6.15 -1.2921 MIMAT0005843 mmu-miR-1188 79263 Trim39 agGACCGGGUU-GGAG-UGUGGu | |||::|: :||| ||||| acCAGGCUUAGUUCUCGACACCc 2 20 51 73 [mm9:17:36400095-36400117:-] 0.5009 126 0 -23.92 -0.3195 MIMAT0005846 mmu-miR-467f 79263 Trim39 acauccacacacacACAUAUa |||||| aucuuuuuuuuuaaUGUAUAu 2 8 205 225 [mm9:17:36399943-36399963:-] 0.5238 120 6 -5.26 -0.1876 MIMAT0005853 mmu-miR-669e 79263 Trim39 uacuugUACGUGUGUGUUCUGu || : |||||||||| uggguaAUCUUCACACAAGACu 2 17 1329 1350 [mm9:17:36395969-36395990:-] 0.6140 160 7 -19.75 -0.3219 MIMAT0005853 mmu-miR-669e 79263 Trim39 uacuugUACGUGUGUGUUCUGu || : |||||||||| uggguaAUCUUCACACAAGACu 2 17 1329 1350 [mm9:17:36395969-36395990:-] 0.6140 160 7 -19.75 -0.3221 MIMAT0005853 mmu-miR-669e 79263 Trim39 uacuUGUACGUGUGUGUUCUGu ||||||| | :|||||| auauACAUGCA-A-GCAAGACa 2 19 172 191 [mm9:17:36399977-36399996:-] 0.5009 146 6 -21.82 -0.1101 MIMAT0005854 mmu-miR-467g 79263 Trim39 uauauacacacacaUACAUAu |||||| aaucuuuuuuuuuaAUGUAUa 2 8 204 224 [mm9:17:36399944-36399964:-] 0.5238 120 6 -5.93 -0.3389 MIMAT0005855 mmu-miR-467h 79263 Trim39 ugUAUAUGUA-CGUGUGUGAAUa ||:||:|| : :||||| | uaAUGUAUAUAAUUUACACUCAa 2 21 216 238 [mm9:17:36399930-36399952:-] 0.5467 127 0 -12.10 -0.1932 MIMAT0005859 mmu-miR-1198 79263 Trim39 ggUUCGGUCGGUCCUUGUGUAu ||| || :|| |||||| gcAAGACACUCA--UACACAUa 2 21 184 203 [mm9:17:36399965-36399984:-] 0.5009 125 6 -17.08 -0.1913 MIMAT0007863 mmu-miR-1902 79263 Trim39 uuCAGUACGGAUGACG-UGGAGa |||| |:||::||| ||||| uaGUCA-GUCUGUUGCUACCUCu 2 21 413 434 [mm9:17:36399734-36399755:-] 0.5293 138 0 -29.86 -0.8394 MIMAT0007868 mmu-miR-1903 79263 Trim39 acagaguccuucuuCUUCUUCc ||||||| cacuugcuucucuuGAAGAAGa 2 9 30 51 [mm9:17:36400117-36400138:-] 0.5009 140 7 -16.05 -0.3524 MIMAT0007872 mmu-miR-1906 79263 Trim39 ucgGGACGGAGUCCGACGACGu |||| |:| ||||||| caaCCUGGAUUA-UCUGCUGCc 2 20 1308 1328 [mm9:17:36395991-36396011:-] 0.6140 153 7 -19.76 -0.6438 MIMAT0007872 mmu-miR-1906 79263 Trim39 ucgGGACGGAGUCCGACGACGu |||| |:| ||||||| caaCCUGGAUUA-UCUGCUGCc 2 20 1308 1328 [mm9:17:36395991-36396011:-] 0.6140 153 7 -19.76 -0.6440 MIMAT0007873 mmu-miR-1896 79263 Trim39 gaggaguGGGUGGUAGUCUCUc ||| :: ||||||| ugacauuCCCCUUUUCAGAGAa 2 16 1198 1219 [mm9:17:36396100-36396121:-] 0.6096 151 7 -18.51 -1.1839 MIMAT0007873 mmu-miR-1896 79263 Trim39 gaggaguGGGUGGUAGUCUCUc ||| :: ||||||| ugacauuCCCCUUUUCAGAGAa 2 16 1198 1219 [mm9:17:36396100-36396121:-] 0.6096 151 7 -18.51 -1.1840 MIMAT0007873 mmu-miR-1896 79263 Trim39 gaggAGUGGGUGGUAGUCUCUc |||::| :: ||||| | aagaUCAUUC-UUUUCAGAAAa 2 19 243 263 [mm9:17:36399905-36399925:-] 0.5467 120 0 -11.06 -0.1070 MIMAT0007873 mmu-miR-1896 79263 Trim39 gaggAGUGGGUGGUAGUC-UCUc || |::|:| |||| ||| cggaUCUCUUAUC-UCAGAAGAg 2 19 466 487 [mm9:17:36399681-36399702:-] 0.5747 120 0 -19.01 -0.4886 MIMAT0007877 mmu-miR-1894-5p 79263 Trim39 ucUCC--GUCCACCAUCCCCUCUc ||| ||| | | ||||||| agAGGUUCAGAU--UUGGGGAGAa 2 21 622 643 [mm9:17:36396676-36396697:-] 0.5712 148 7 -22.13 -0.9082 MIMAT0007877 mmu-miR-1894-5p 79263 Trim39 ucUCC--GUCCACCAUCCCCUCUc ||| ||| | | ||||||| agAGGUUCAGAU--UUGGGGAGAa 2 21 622 643 [mm9:17:36396676-36396697:-] 0.5712 148 7 -22.13 -0.9084 MIMAT0009390 mmu-miR-1927 79263 Trim39 agucaGGGAUUGUA---GGUCUCCAg || ||: || |||||||| auuacCCAUAGGAUUAGCCAGAGGUu 2 19 603 628 [mm9:17:36396691-36396716:-] 0.5712 153 7 -23.65 -0.2468 MIMAT0009390 mmu-miR-1927 79263 Trim39 agucaGGGAUUGUA---GGUCUCCAg || ||: || |||||||| auuacCCAUAGGAUUAGCCAGAGGUu 2 19 603 628 [mm9:17:36396691-36396716:-] 0.5712 153 7 -23.65 -0.2469 MIMAT0009392 mmu-miR-1929 79263 Trim39 gagacgaGAUAUUUCAGGAUCUu || |: ||||||||| accauuaCUUUGCAGUCCUAGAa 2 17 321 343 [mm9:17:36399825-36399847:-] 0.5382 160 7 -22.33 -0.6603 MIMAT0009407 mmu-miR-1942 79263 Trim39 guuGGUCUACU-UCUGUAGACu |:: | || | ||||||| aucCUGCAAGACAUACAUCUGa 2 19 766 787 [mm9:17:36396532-36396553:-] 0.5176 149 7 -13.25 -0.3022 MIMAT0009407 mmu-miR-1942 79263 Trim39 guuGGUCUACU-UCUGUAGACu |:: | || | ||||||| aucCUGCAAGACAUACAUCUGa 2 19 766 787 [mm9:17:36396532-36396553:-] 0.5176 149 7 -13.25 -0.3024 MIMAT0009409 mmu-miR-1944 79263 Trim39 uuaGUCUUGAACUGUAAG-UCGUGUCUc | |::|| |:: | |||||||| ggaCUGGGCUGCAUGACCAAGCACAGAu 2 25 157 184 [mm9:17:36397135-36397162:-] 0.5164 155 7 -21.52 -0.2340 MIMAT0009409 mmu-miR-1944 79263 Trim39 uuaGUCUUGAACUGUAAG-UCGUGUCUc | |::|| |:: | |||||||| ggaCUGGGCUGCAUGACCAAGCACAGAu 2 25 157 184 [mm9:17:36397135-36397162:-] 0.5164 155 7 -21.52 -0.2341 MIMAT0009417 mmu-miR-1950 79263 Trim39 acugguauaggaaUCUACGUCu |||||||| ---------caagAGAUGCAGu 2 10 1 13 [mm9:17:36397306-36397318:-] 0.5167 145 7 -12.93 -0.5361 MIMAT0009417 mmu-miR-1950 79263 Trim39 acugguauaggaaUCUACGUCu |||||||| ---------caagAGAUGCAGu 2 10 1 13 [mm9:17:36397306-36397318:-] 0.5167 145 7 -12.93 -0.3252 MIMAT0009419 mmu-miR-669m 79263 Trim39 uauacAAACACACCUACAUAUa ||| | | ||||||| aaucuUUUUUUUUAAUGUAUAu 2 18 204 225 [mm9:17:36399943-36399964:-] 0.5238 153 7 -6.54 -1.2103 MIMAT0009422 mmu-miR-1951 79263 Trim39 aucggUGUGGUCAGAGGUGAUg ||| || ||||||| auggaACA-AAGGAUCCACUAa 2 18 1477 1497 [mm9:17:36395822-36395842:-] 0.6694 147 7 -18.38 -0.9127 MIMAT0009422 mmu-miR-1951 79263 Trim39 aucggUGUGGUCAGAGGUGAUg ||| || ||||||| auggaACA-AAGGAUCCACUAa 2 18 1477 1497 [mm9:17:36395822-36395842:-] 0.6694 147 7 -18.38 -0.8822 MIMAT0009427 mmu-miR-669n 79263 Trim39 ugUGUG-UAGGUGUGUGUUUa |:|: ||::|||| |||| guAUAUAAUUUACACUCAAAa 2 19 220 240 [mm9:17:36399928-36399948:-] 0.5467 133 0 -14.16 -0.1044 MIMAT0009434 mmu-miR-1961 79263 Trim39 aaGAUUGAUGAUGGAGu || ::|:||||||| guCU-GUUGCUACCUCu 2 16 419 434 [mm9:17:36399734-36399749:-] 0.5293 149 7 -17.77 -0.7584 MIMAT0009437 mmu-miR-1964 79263 Trim39 uuucggcCUCGGGUCUUCAGCc |||:|:|||||||| cugucauGAGUCUAGAAGUCGa 2 16 446 467 [mm9:17:36396852-36396873:-] 0.5655 167 7 -26.18 -0.3900 MIMAT0009437 mmu-miR-1964 79263 Trim39 uuucggcCUCGGGUCUUCAGCc |||:|:|||||||| cugucauGAGUCUAGAAGUCGa 2 16 446 467 [mm9:17:36396852-36396873:-] 0.5655 167 7 -26.18 -0.3902 MIMAT0009457 mmu-miR-1839-3p 79263 Trim39 cgACAACCAUCUAUUCAUCC-AGa ||| || | ||||||| || gcUGUCUCUA-AAAAGUAGGCUCc 2 22 711 733 [mm9:17:36396586-36396608:-] 0.5667 123 0 -15.32 -0.3734 MIMAT0009457 mmu-miR-1839-3p 79263 Trim39 cgACAACCAUCUAUUCAUCC-AGa ||| || | ||||||| || gcUGUCUCUA-AAAAGUAGGCUCc 2 22 711 733 [mm9:17:36396586-36396608:-] 0.5667 123 0 -15.32 -0.3736 MIMAT0009460 mmu-miR-1982.1 79263 Trim39 gacacccucUUGUAUCCCACUCu ||: |:||||||| augcaguuuAAU-UGGGGUGAGg 2 15 7 28 [mm9:17:36397291-36397312:-] 0.4750 148 7 -17.33 -0.1055 MIMAT0011208 mmu-miR-2132 79263 Trim39 guagcgcAGUUGUGGGCGg ||:|||||||| uuaguucUCGACACCCGCa 2 13 58 76 [mm9:17:36400092-36400110:-] 0.5009 156 7 -22.65 -0.7083 MIMAT0015640 mmu-miR-3470a 79263 Trim39 ggUCGGACCAGAUGUUUCACu |||||||||||||||||| ccAGCCUGGUCUACAAAGUGa 2 20 844 864 [mm9:17:36396455-36396475:-] 0.4976 195 7 -43.08 -0.2125 MIMAT0015640 mmu-miR-3470a 79263 Trim39 ggUCGGACCAGAUGUUUCACu |||||||||||||||||| ccAGCCUGGUCUACAAAGUGa 2 20 844 864 [mm9:17:36396455-36396475:-] 0.4976 195 7 -43.08 -0.2127 MIMAT0015642 mmu-miR-3471 79263 Trim39 uuaCGGAAUG---UCA---ACCUAGAGu |:||||| :|| ||||||| aucGUCUUACUAUGGUAAGCGGAUCUCu 2 20 447 474 [mm9:17:36399694-36399721:-] 0.5734 145 7 -18.47 -0.5593 MIMAT0015646 mmu-miR-3474 79263 Trim39 cuuaggugCAGAGGAGGGUCCc || |||||||| gugggagaGUGGACUCCCAGGg 2 15 205 226 [mm9:17:36397093-36397114:-] 0.6050 146 7 -25.60 -0.1000 MIMAT0000121 mmu-let-7g 79263 Trim39 uuGACAU--GUU---UGAUGAUGGAGu :|||| ||: ::|:||||||| ugUUGUAGUCAGUCUGUUGCUACCUCu 2 21 408 434 [mm9:17:36399734-36399760:-] 0.5293 150 7 -19.62 -0.7730 MIMAT0000122 mmu-let-7i 79263 Trim39 uuGUCGUGUUUGAUGAUGGAGu |||: : ::|:||||||| guCAGUCU--GUUGCUACCUCu 2 21 415 434 [mm9:17:36399734-36399753:-] 0.5293 149 7 -19.17 -0.7694 MIMAT0000123 mmu-miR-1 79263 Trim39 uauGUAUGAA----GAAA-UGUAAGGu :|| ||| |||| ||||||| uucUAUCCUUCACCCUUUGACAUUCCc 2 20 1181 1207 [mm9:17:36396112-36396138:-] 0.6096 153 7 -12.44 -0.4779 MIMAT0000123 mmu-miR-1 79263 Trim39 uauGUAUGAA----GAAA-UGUAAGGu :|| ||| |||| ||||||| uucUAUCCUUCACCCUUUGACAUUCCc 2 20 1181 1207 [mm9:17:36396112-36396138:-] 0.6096 153 7 -12.44 -0.4782 MIMAT0000125 mmu-miR-23b 79263 Trim39 ccaUUAGG-GACCGUUACACUa :|||| || ||||||| aagGAUCCACU---AAUGUGA- 2 19 1485 1502 [mm9:17:36395817-36395834:-] 0.6694 145 7 -13.67 -0.5722 MIMAT0000134 mmu-miR-124 79263 Trim39 ccguaAGUGG-CGCACGGAAu |:||| :||||||| uacucUUACCUUUGUGCCUUg 2 16 1416 1436 [mm9:17:36395883-36395903:-] 0.7020 150 7 -20.40 -0.8935 MIMAT0000134 mmu-miR-124 79263 Trim39 ccguaAGUGG-CGCACGGAAu |:||| :||||||| uacucUUACCUUUGUGCCUUg 2 16 1416 1436 [mm9:17:36395883-36395903:-] 0.7020 150 7 -20.40 -0.8931 MIMAT0000140 mmu-miR-128 79263 Trim39 uuucUCUGGCCAAGUGACACu ||| | | ||||||| acuuAGA--GAUACACUGUGc 2 18 278 296 [mm9:17:36399872-36399890:-] 0.5467 146 7 -17.74 -0.9308 MIMAT0000141 mmu-miR-130a 79263 Trim39 uacgggaaaauuguaACGUGAc |||||| cuuagagauacacugUGCACUc 2 8 279 300 [mm9:17:36399868-36399889:-] 0.5467 120 6 -8.59 -0.1247 MIMAT0000157 mmu-miR-145 79263 Trim39 ucccuaaggacccuUUUGACCUg |||||||| uugcuaaccgcauuAAACUGGAa 2 10 583 605 [mm9:17:36399563-36399585:-] 0.5971 145 7 -14.80 -1.0957 MIMAT0000158 mmu-miR-146a 79263 Trim39 uugggUACCUUAAGUCAA-GAGu | || |||||||| ||| cagugAGGGCAUUCAGUUCCUCc 2 18 1365 1387 [mm9:17:36395932-36395954:-] 0.6580 133 0 -15.95 -0.4491 MIMAT0000158 mmu-miR-146a 79263 Trim39 uugggUACCUUAAGUCAA-GAGu | || |||||||| ||| cagugAGGGCAUUCAGUUCCUCc 2 18 1365 1387 [mm9:17:36395932-36395954:-] 0.6580 133 0 -15.95 -0.4494 MIMAT0000158 mmu-miR-146a 79263 Trim39 uuggguaccuuaAGUCAAGAGu |:||||||| agaagaccaggcUUAGUUCUCg 2 11 46 67 [mm9:17:36400101-36400122:-] 0.5009 146 7 -20.05 -0.3898 MIMAT0000162 mmu-miR-152 79263 Trim39 ggUUCAAGACAGUACGUGAcu :|| | ::|||||| uaGAGAUACACUGUGCACUca 3 20 281 301 [mm9:17:36399867-36399887:-] 0.5467 123 0 -9.56 -0.1277 MIMAT0000165 mmu-miR-155 79263 Trim39 uggggauaGUGUU-AA-UCGUAAUu || |: || ||||||| uccggggcCAGAGCUUGAGCAUUAa 2 16 476 500 [mm9:17:36396819-36396843:-] 0.5192 145 7 -12.71 -0.2665 MIMAT0000165 mmu-miR-155 79263 Trim39 uggggauaGUGUU-AA-UCGUAAUu || |: || ||||||| uccggggcCAGAGCUUGAGCAUUAa 2 16 476 500 [mm9:17:36396819-36396843:-] 0.5192 145 7 -12.71 -0.2666 MIMAT0000208 mmu-miR-10b 79263 Trim39 guguuuaagccaagaUGUCCCAu ||||||| uucucacccaugagaACAGGGUa 2 9 1108 1130 [mm9:17:36396189-36396211:-] 0.6096 140 7 -17.31 -0.5782 MIMAT0000208 mmu-miR-10b 79263 Trim39 guguuuaagccaagaUGUCCCAu ||||||| uucucacccaugagaACAGGGUa 2 9 1108 1130 [mm9:17:36396189-36396211:-] 0.6096 140 7 -17.31 -0.5784 MIMAT0000209 mmu-miR-129-5p 79263 Trim39 cguucgggucuggcGUUUUUc |||||| auauaauuuacacuCAAAAAa 2 8 222 242 [mm9:17:36399926-36399946:-] 0.5467 120 6 -5.18 -0.1686 MIMAT0000215 mmu-miR-186 79263 Trim39 ucgggUUUUCCUCUUAAGAAAc |||| || ||||||| ucaaaAAAAAGAUCAUUCUUUu 2 18 235 256 [mm9:17:36399912-36399933:-] 0.5467 161 7 -8.92 -0.6846 MIMAT0000221 mmu-miR-191 79263 Trim39 gucgaCGAAAACCCUAAGG-CAAc |||| | ||||| ||| caaagGCUUGCGUUAUUCCUGUUu 2 19 677 700 [mm9:17:36396619-36396642:-] 0.5856 122 0 -11.88 -0.3354 MIMAT0000221 mmu-miR-191 79263 Trim39 gucgaCGAAAACCCUAAGG-CAAc |||| | ||||| ||| caaagGCUUGCGUUAUUCCUGUUu 2 19 677 700 [mm9:17:36396619-36396642:-] 0.5856 122 0 -11.88 -0.3356 MIMAT0000235 mmu-miR-202-3p 79263 Trim39 agaaggguacgcgAUAUGGAGa |||||||| gcacaggggucugUAUACCUCg 2 10 399 420 [mm9:17:36396899-36396920:-] 0.6118 145 7 -13.06 -0.1597 MIMAT0000235 mmu-miR-202-3p 79263 Trim39 agaaggguacgcgAUAUGGAGa |||||||| gcacaggggucugUAUACCUCg 2 10 399 420 [mm9:17:36396899-36396920:-] 0.6118 145 7 -13.06 -0.1598 MIMAT0000238 mmu-miR-205 79263 Trim39 guCUGAGG-CCACCUUACUUCCu | :||: || ||||||||| auGUUUCUAGGAUGAAUGAAGGg 2 21 535 557 [mm9:17:36396762-36396784:-] 0.5140 159 7 -21.16 -0.2708 MIMAT0000238 mmu-miR-205 79263 Trim39 guCUGAGG-CCACCUUACUUCCu | :||: || ||||||||| auGUUUCUAGGAUGAAUGAAGGg 2 21 535 557 [mm9:17:36396762-36396784:-] 0.5140 159 7 -21.16 -0.2710 MIMAT0000239 mmu-miR-206 79263 Trim39 gguGUGUGAAGGAAUGUAAGGu ||| ||| | ||||||| cuuCACCCUU--UGACAUUCCc 2 20 1188 1207 [mm9:17:36396112-36396131:-] 0.6096 156 7 -15.73 -0.4746 MIMAT0000239 mmu-miR-206 79263 Trim39 gguGUGUGAAGGAAUGUAAGGu ||| ||| | ||||||| cuuCACCCUU--UGACAUUCCc 2 20 1188 1207 [mm9:17:36396112-36396131:-] 0.6096 156 7 -15.73 -0.4748 MIMAT0000246 mmu-miR-122 79263 Trim39 guuUGUGGUAACAGUGUGAGgu |:|: || |:|||||| uguAUAUAAU--UUACACUCaa 3 20 219 238 [mm9:17:36399930-36399949:-] 0.5467 132 0 -10.88 -0.4262 MIMAT0000379 mmu-miR-301a 79263 Trim39 cgAAACUGUUAUGAUA-ACGUGAc || || :|||| | |||||| acUUAGA-GAUACACUGUGCACUc 2 22 278 300 [mm9:17:36399868-36399890:-] 0.5467 127 6 -14.71 -1.1032 MIMAT0000383 mmu-let-7d 79263 Trim39 uugAUACGUUGG---AUGAUGGAGa || ||::| |:||||||| uugUAGUCAGUCUGUUGCUACCUCu 2 20 410 434 [mm9:17:36399734-36399758:-] 0.5293 150 7 -20.17 -0.7730 MIMAT0000387 mmu-miR-130b 79263 Trim39 uacgggaaaguaguaACGUGAc |||||| cuuagagauacacugUGCACUc 2 8 279 300 [mm9:17:36399868-36399889:-] 0.5467 120 6 -8.27 -0.1222 MIMAT0000516 mmu-miR-148a 79263 Trim39 ugUUUC-AAGACAUCACGUGAcu |:|| | | | ||||||| uuAGAGAUACACU-GUGCACUca 3 21 280 301 [mm9:17:36399867-36399888:-] 0.5467 129 0 -12.80 -0.1277 MIMAT0000520 mmu-miR-208a 79263 Trim39 ugUUCGAAAAACGAGCAGAAUa | || || |||||||| aaACGC-UUAAAAUCGUCUUAc 2 21 436 456 [mm9:17:36399712-36399732:-] 0.5734 146 7 -13.59 -0.7792 MIMAT0000521 mmu-let-7a 79263 Trim39 uugAUAUGUUGG---AUGAUGGAGu || ||::| |:||||||| uugUAGUCAGUCUGUUGCUACCUCu 2 20 410 434 [mm9:17:36399734-36399758:-] 0.5293 150 7 -18.60 -0.7730 MIMAT0000522 mmu-let-7b 79263 Trim39 uugguguguugGAUGAUGGAGu :|:||||||| uagucagucugUUGCUACCUCu 2 12 413 434 [mm9:17:36399734-36399755:-] 0.5293 147 7 -18.03 -0.7694 MIMAT0000523 mmu-let-7c 79263 Trim39 uugguauguugGAUGAUGGAGu :|:||||||| uagucagucugUUGCUACCUCu 2 12 413 434 [mm9:17:36399734-36399755:-] 0.5293 147 7 -18.03 -0.7730 MIMAT0000524 mmu-let-7e 79263 Trim39 uugAUAUGUUGG---AGGAUGGAGu || ||::| | ||||||| uugUAGUCAGUCUGUUGCUACCUCu 2 20 410 434 [mm9:17:36399734-36399758:-] 0.5293 146 7 -17.16 -0.7730 MIMAT0000525 mmu-let-7f 79263 Trim39 uugAUAUGUUAG---AUGAUGGAGu || ||:|| |:||||||| uugUAGUCAGUCUGUUGCUACCUCu 2 20 410 434 [mm9:17:36399734-36399758:-] 0.5293 154 7 -19.77 -0.7694 MIMAT0000531 mmu-miR-22 79263 Trim39 ugUCAAGA--AGUUG----ACCGUCGAa |||||| || | |||||||| uuAGUUCUCGACACCCGCAUGGCAGCUc 2 21 58 85 [mm9:17:36400083-36400110:-] 0.5009 150 7 -24.54 -0.3830 MIMAT0000532 mmu-miR-23a 79263 Trim39 ccUUUAGG-GACCGUUACACUa ::|||| || ||||||| aaGGAUCCACU---AAUGUGA- 2 20 1485 1502 [mm9:17:36395817-36395834:-] 0.6694 146 7 -14.01 -0.5722 MIMAT0000545 mmu-miR-98 79263 Trim39 uuGUUAUGUUGAAUGAUGGAGu ||:| :: ||:||||||| guCAGUCUG--UUGCUACCUCu 2 21 415 434 [mm9:17:36399734-36399753:-] 0.5293 153 7 -17.11 -0.7730 MIMAT0000565 mmu-miR-328 79263 Trim39 ugccuuCCCGUC-UCUCCCGGUc | |:|| | ||||||| ugguuuGUGUAGCAAAGGGCCAg 2 17 1139 1161 [mm9:17:36396158-36396180:-] 0.6096 151 7 -24.68 -0.5321 MIMAT0000565 mmu-miR-328 79263 Trim39 ugccuuCCCGUC-UCUCCCGGUc | |:|| | ||||||| ugguuuGUGUAGCAAAGGGCCAg 2 17 1139 1161 [mm9:17:36396158-36396180:-] 0.6096 151 7 -24.68 -0.5323 MIMAT0000580 mmu-miR-148b 79263 Trim39 ugUUUC-AAGACACUACGUGAcu |:|| | | || |||||| uuAGAGAUACACUG-UGCACUca 3 21 280 301 [mm9:17:36399867-36399888:-] 0.5467 129 0 -10.74 -0.1183 MIMAT0000590 mmu-miR-342-3p 79263 Trim39 ugcccACGCUA-AAGACACACUCu || ||| |:|||||||| gcaucUGGGAUGGUUUGUGUGAGg 2 19 123 146 [mm9:17:36397173-36397196:-] 0.5799 161 7 -24.72 -0.2681 MIMAT0000590 mmu-miR-342-3p 79263 Trim39 ugcccACGCUA-AAGACACACUCu || ||| |:|||||||| gcaucUGGGAUGGUUUGUGUGAGg 2 19 123 146 [mm9:17:36397173-36397196:-] 0.5799 161 7 -24.72 -0.2682 MIMAT0000648 mmu-miR-10a 79263 Trim39 guguuuaagccuagaUGUCCCAu ||||||| uucucacccaugagaACAGGGUa 2 9 1108 1130 [mm9:17:36396189-36396211:-] 0.6096 140 7 -17.31 -0.5782 MIMAT0000648 mmu-miR-10a 79263 Trim39 guguuuaagccuagaUGUCCCAu ||||||| uucucacccaugagaACAGGGUa 2 9 1108 1130 [mm9:17:36396189-36396211:-] 0.6096 140 7 -17.31 -0.5784 MIMAT0000656 mmu-miR-139-5p 79263 Trim39 gaccucugugcacGUGACAUCu :||||||| gagugucccuccuUACUGUAGu 2 10 185 206 [mm9:17:36397113-36397134:-] 0.5607 141 7 -11.93 -0.2092 MIMAT0000656 mmu-miR-139-5p 79263 Trim39 gaccucugugcacGUGACAUCu :||||||| gagugucccuccuUACUGUAGu 2 10 185 206 [mm9:17:36397113-36397134:-] 0.5607 141 7 -11.93 -0.2094 MIMAT0000677 mmu-miR-7a 79263 Trim39 ugUUGUUUUA-GUGAUCA-GAAGGu || :| || ||: :|| ||||| aaAAAGACAUACAUCGGUCCUUCCa 2 22 920 944 [mm9:17:36396375-36396399:-] 0.5495 124 0 -15.69 -0.6403 MIMAT0000677 mmu-miR-7a 79263 Trim39 ugUUGUUUUA-GUGAUCA-GAAGGu || :| || ||: :|| ||||| aaAAAGACAUACAUCGGUCCUUCCa 2 22 920 944 [mm9:17:36396375-36396399:-] 0.5495 124 0 -15.69 -0.6405 MIMAT0000678 mmu-miR-7b 79263 Trim39 ugUUGUUUUA-GUGUUCA-GAAGGu || :| || ||: :|| ||||| aaAAAGACAUACAUCGGUCCUUCCa 2 22 920 944 [mm9:17:36396375-36396399:-] 0.5495 124 0 -14.75 -0.6403 MIMAT0000678 mmu-miR-7b 79263 Trim39 ugUUGUUUUA-GUGUUCA-GAAGGu || :| || ||: :|| ||||| aaAAAGACAUACAUCGGUCCUUCCa 2 22 920 944 [mm9:17:36396375-36396399:-] 0.5495 124 0 -14.75 -0.6405 MIMAT0000679 mmu-miR-217 79263 Trim39 aggucagucaaggaCUACGUCAu |||||||| ---------caagaGAUGCAGUu 2 10 1 14 [mm9:17:36397305-36397318:-] 0.5167 145 7 -12.67 -0.1793 MIMAT0000679 mmu-miR-217 79263 Trim39 agGUCAG-UCAAGGAC---UACGUCAu || || | |::|| ||||||| ugCACUCAAAAUUUUGUAAAUGCAGUu 2 22 294 320 [mm9:17:36399848-36399874:-] 0.5467 147 7 -14.35 -1.0241 MIMAT0000711 mmu-miR-365 79263 Trim39 uauuccuaaaaAUCCCCGUAAu |: ||||||| agaaacugcagUGAGGGCAUUc 2 12 1357 1378 [mm9:17:36395941-36395962:-] 0.6140 143 7 -10.05 -0.4298 MIMAT0000711 mmu-miR-365 79263 Trim39 uauuccuaaaaAUCCCCGUAAu |: ||||||| agaaacugcagUGAGGGCAUUc 2 12 1357 1378 [mm9:17:36395941-36395962:-] 0.6140 143 7 -10.05 -0.4300 MIMAT0000739 mmu-miR-375 79263 Trim39 agugcgcucggcuugCUUGUUu |||||| guuggugaaaauaugGAACAAa 2 8 1465 1486 [mm9:17:36395833-36395854:-] 0.7020 120 6 -10.05 -0.1325 MIMAT0000739 mmu-miR-375 79263 Trim39 agugcgcucggcuugCUUGUUu |||||| guuggugaaaauaugGAACAAa 2 8 1465 1486 [mm9:17:36395833-36395854:-] 0.7020 120 6 -10.05 -0.1525 MIMAT0000741 mmu-miR-377 79263 Trim39 uguuUUCAACGGAAACACACUa ::| || ||||||||| aucuGGGAUG-GUUUGUGUGAg 2 19 125 145 [mm9:17:36397174-36397194:-] 0.5799 152 7 -12.48 -0.2922 MIMAT0000741 mmu-miR-377 79263 Trim39 uguuUUCAACGGAAACACACUa ::| || ||||||||| aucuGGGAUG-GUUUGUGUGAg 2 19 125 145 [mm9:17:36397174-36397194:-] 0.5799 152 7 -12.48 -0.2924 MIMAT0004747 mmu-miR-411 79263 Trim39 gcaUGCGA--UAUGCCAG-AUGAu ||||| | |: ||| |||| aaaACGCUUAAAAUCGUCUUACUa 2 19 435 458 [mm9:17:36399710-36399733:-] 0.5734 121 0 -15.46 -0.9005 MIMAT0001418 mmu-miR-431 79263 Trim39 acguacugccGGACGUUCUGu |||||||||| uggaagcaauCCUGCAAGACa 2 12 758 778 [mm9:17:36396541-36396561:-] 0.5352 155 7 -21.42 -0.4810 MIMAT0001418 mmu-miR-431 79263 Trim39 acguacugccGGACGUUCUGu |||||||||| uggaagcaauCCUGCAAGACa 2 12 758 778 [mm9:17:36396541-36396561:-] 0.5352 155 7 -21.42 -0.4813 MIMAT0001418 mmu-miR-431 79263 Trim39 acguacugcCGGACGUUCUGu || ||||||| uauauacauGCAAGCAAGACa 2 13 171 191 [mm9:17:36399977-36399997:-] 0.5009 144 7 -16.33 -1.1945 MIMAT0003168 mmu-miR-543 79263 Trim39 uuCUUCACGUGGC--GCUUACAAa |||| | :|:| ||||||| ggGAAGAG-GCUGAAGGAAUGUUu 2 21 518 540 [mm9:17:36396779-36396801:-] 0.5192 149 7 -17.10 -0.1741 MIMAT0003168 mmu-miR-543 79263 Trim39 uucuucacguggcgCUUACAAa ||||||| gccuuggccuuaagGAAUGUUc 2 9 1008 1029 [mm9:17:36396290-36396311:-] 0.5989 140 7 -8.57 -0.1877 MIMAT0003168 mmu-miR-543 79263 Trim39 uucuucacguGGCGCUUACAaa | | |||||| uuccccuuuuCAGAGAAUGUaa 3 13 1203 1224 [mm9:17:36396095-36396116:-] 0.6340 124 0 -5.54 -0.1582 MIMAT0003168 mmu-miR-543 79263 Trim39 uuCUUCACGUGGC--GCUUACAAa |||| | :|:| ||||||| ggGAAGAG-GCUGAAGGAAUGUUu 2 21 518 540 [mm9:17:36396779-36396801:-] 0.5192 149 7 -17.10 -0.1742 MIMAT0003168 mmu-miR-543 79263 Trim39 uucuucacguggcgCUUACAAa ||||||| gccuuggccuuaagGAAUGUUc 2 9 1008 1029 [mm9:17:36396290-36396311:-] 0.5989 140 7 -8.57 -0.1878 MIMAT0003168 mmu-miR-543 79263 Trim39 uucuucacguGGCGCUUACAaa | | |||||| uuccccuuuuCAGAGAAUGUaa 3 13 1203 1224 [mm9:17:36396095-36396116:-] 0.6340 124 0 -5.54 -0.1583 MIMAT0003182 mmu-miR-494 79263 Trim39 cuccaaagggcaCAUACAAAGu | ||||||| aagaggcugaagGAAUGUUUCu 2 11 521 542 [mm9:17:36396777-36396798:-] 0.5192 142 7 -14.09 -0.2887 MIMAT0003182 mmu-miR-494 79263 Trim39 cuccaaagggcaCAUACAAAGu | ||||||| aagaggcugaagGAAUGUUUCu 2 11 521 542 [mm9:17:36396777-36396798:-] 0.5192 142 7 -14.09 -0.2888 MIMAT0004186 mmu-miR-301b 79263 Trim39 cgAAACUGUUAUG-GUAACGUGAc || || :|||| | |||||| acUUAGA-GAUACACUGUGCACUc 2 22 278 300 [mm9:17:36399868-36399890:-] 0.5467 130 6 -15.82 -0.1222 MIMAT0003889 mmu-miR-758 79263 Trim39 aucaccUGGUCCAGUGUUu |:: ||||||| guacauAUUUUGUCACAAa 2 14 1263 1281 [mm9:17:36396038-36396056:-] 0.5963 141 7 -11.25 -1.1724 MIMAT0003889 mmu-miR-758 79263 Trim39 aucaccUGGUCCAGUGUUu |:: ||||||| guacauAUUUUGUCACAAa 2 14 1263 1281 [mm9:17:36396038-36396056:-] 0.5963 141 7 -11.25 -1.1726 MIMAT0003475 mmu-miR-146b 79263 Trim39 ucggaUACCUUAAGUCAA-GAGu | || |||||||| ||| cagugAGGGCAUUCAGUUCCUCc 2 18 1365 1387 [mm9:17:36395932-36395954:-] 0.6580 133 0 -16.03 -0.4491 MIMAT0003475 mmu-miR-146b 79263 Trim39 ucggaUACCUUAAGUCAA-GAGu | || |||||||| ||| cagugAGGGCAUUCAGUUCCUCc 2 18 1365 1387 [mm9:17:36395932-36395954:-] 0.6580 133 0 -16.03 -0.4494 MIMAT0003475 mmu-miR-146b 79263 Trim39 ucggauaccuuaAGUCAAGAGu |:||||||| agaagaccaggcUUAGUUCUCg 2 11 46 67 [mm9:17:36400101-36400122:-] 0.5009 146 7 -16.51 -0.3898 MIMAT0003515 mmu-miR-721 79263 Trim39 aagggggaaaauuaACGUGAc |||||| uuagagauacacugUGCACUc 2 8 280 300 [mm9:17:36399868-36399888:-] 0.5467 120 6 -7.33 -0.1247 MIMAT0004889 mmu-miR-504 79263 Trim39 cuAUCUCACGUC-UGGUCCCAGa || | | ||| |||||||| ucUA-ACUACAGCUCCAGGGUCc 2 21 93 114 [mm9:17:36400054-36400075:-] 0.5009 153 7 -21.40 -0.3030 MIMAT0004889 mmu-miR-504 79263 Trim39 cuAUCUCAC-GUCUGGUC-CCAGa ||||| | ::| :||| |||| gcUAGAGAGAUGGCUCAGUGGUCa 2 21 2 25 [mm9:17:36400143-36400166:-] 0.5024 127 0 -19.08 -0.2798 MIMAT0004937 mmu-miR-875-5p 79263 Trim39 guGGACUAUUUUGACUCCAUAu ::||| : | |||||||| caUUUGA-GUCAGUGAGGUAUc 2 21 496 516 [mm9:17:36399652-36399672:-] 0.5759 150 7 -18.20 -0.3727 MIMAT0004939 mmu-miR-208b 79263 Trim39 ugUUUG-GAAAACAAGCAGAAUa |||| ||| |||||||| uaAAACGCUUAAAAUCGUCUUAc 2 21 434 456 [mm9:17:36399712-36399734:-] 0.5734 159 7 -14.58 -0.7756

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G056188 Trim39 Mus musculus 79263 19536157 0 0 R47917; MOUSE$TRIM39_01; Binding factors: mmu-miR-124-3p // 0 0 R47918; MOUSE$TRIM39_02; Binding factors: mmu-miR-106a-5p , mmu-miR-17-5p , mmu-miR-20b-5p , mmu-miR-93-5p // 0 0 R47921; MOUSE$TRIM39_03; Binding factors: mmu-miR-128-3p , mmu-miR-27a-3p , mmu-miR-27b-3p // 0 0 R68945; MOUSE$TRIM39_04; Binding factors: mmu-miR-155-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim39 mmu-miR-501-5p beg:1476 end:1491 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& || ||||||||| &5' ---------GGAACAAAGGAT- 3' Trim39 mmu-miR-20astar beg:323 end:340 pic:3' GAAATTCACGAGCATTACGTCA 5'& ||||. ||||||| &5' -------TGCTTAAAATGCAG- 3' Trim39 mmu-miR-23a beg:1484 end:1501 pic:3' CCTTTAGGGACCGTTACACTA 5'& ..|||| .||||||| &5' --GGATCCAC--TAATGTGA- 3' Trim39 mmu-miR-23b beg:1485 end:1501 pic:3' CCATTAGGGACCGTTACACTA 5'& .|||| .||||||| &5' ---GATCCAC--TAATGTGA- 3' Trim39 mmu-miR-669d beg:1329 end:1348 pic:3' TGTATATGTACGTGTGTGTTCA 5'& .|| |||||||| &5' ----GTAATCTT-CACACAAG- 3' Trim39 mmu-miR-10b beg:1120 end:1131 pic:3' GTGTTTAAGCCAAGATGTCCCAT 5'& |||||||| &5' ---------------ACAGGGTA 3' Trim39 mmu-miR-297b-5p beg:764 end:784 pic:3' TGTACAAGTACGTG-TGTATGTA 5'& || |||| |||||||| &5' ------TCCTGCAAGACATACAT 3' Trim39 mmu-miR-297a beg:767 end:784 pic:3' TGTACGTGTACGTG-TGTATGTA 5'& |||| |||||||| &5' ---------TGCAAGACATACAT 3' Trim39 mmu-miR-297c beg:767 end:784 pic:3' TGTACATGTACGTG-TGTATGTA 5'& |||| |||||||| &5' ---------TGCAAGACATACAT 3' Trim39 mmu-miR-1942 beg:768 end:788 pic:3' GTTGGTCTACTTCTGTAGACT 5'& .| ||| |||||||| &5' --GCAAGACAT--ACATCTGA 3' Trim39 mmu-miR-1 beg:1188 end:1207 pic:3' TATGTATGAAGAAATGTAAGGT 5'& || |||. ||||||| &5' ---CACCCTTTG--ACATTCC- 3' Trim39 mmu-miR-206 beg:1188 end:1207 pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& ||| | |||. ||||||| &5' -CAC-C-CTTTG--ACATTCC- 3' Trim39 mcmv-miR-m22-1 beg:251 end:269 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& ||| ||.| ||||||| &5' ---CCTA-GTGC--ACGGGGA- 3' Trim39 mmu-miR-17star beg:1351 end:1369 pic:3' GATGTTCACGGGAGTGACGTCA 5'& ||||| |||||||| &5' --ACAAGAA-----ACTGCAGT 3' Trim39 mmu-miR-20bstar beg:1352 end:1369 pic:3' GATCTTCACGAGTG---TGACGTCA 5'& || |||||||| &5' -----------CAAGAAACTGCAGT 3' Trim39 mmu-miR-26bstar beg:1116 end:1128 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||||||||| &5' -------------GAGAACAGG 3' Trim39 mmu-miR-202-3p beg:402 end:420 pic:3' AGAAGGGTACGCG---ATATGGAGA 5'& | |. |||||||| &5' ---------GGGTCTGTATACCTC- 3' Trim39 mmu-miR-29cstar beg:922 end:939 pic:3' CTTGTGGTCCTCTTTAGCCAGT 5'& .|||. ||||||| &5' -GACATAC------ATCGGTC- 3' Trim39 mmu-miR-217 beg:3 end:14 pic:3' AGGTCAGTCAAGGACTACGTCAT 5'& |||||||| &5' --------------GATGCAGT- 3' Trim39 mmu-miR-880 beg:1088 end:1106 pic:3' AGATGAGTCTCTC-CTACCTCAT 5'& .|| | |||||||| &5' -------GGAAGGTGATGGAGT- 3' Trim39 mmu-miR-331-3p beg:212 end:228 pic:3' AAGATCCTATCCGGGTCCCCG 5'& ||| |||||||| &5' -----GGACT--CCCAGGGG- 3' Trim39 mmu-miR-689 beg:251 end:270 pic:3' CCTGGGGCGGCTCGCCCCTGC 5'& .||. .| ||||||| &5' ---TCCTAGTGCACGGGGAC- 3' Trim39 mcmv-miR-m01-3 beg:1183 end:1195 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& || ||||||| &5' ------------TC-CTTCACC- 3' Trim39 mmu-miR-686 beg:756 end:768 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||||||||| &5' -------------GGAAGCAAT 3' Trim39 mmu-miR-1964 beg:450 end:467 pic:3' TTTCGGCCTCGGGTCTTCAGCC 5'& |||.|.|||||||| &5' -------GAGTCTAGAAGTCG- 3' Trim39 mmu-miR-1950 beg:2 end:13 pic:3' ACTGGTATAGGAATCTACGTCT 5'& |||||||| &5' -------------AGATGCAG- 3' Trim39 mmu-miR-431 beg:760 end:779 pic:3' ACGTACTGCCGGACGTTCTGT 5'& ||| ||||||||||| &5' -GCAAT----CCTGCAAGACA 3' Trim39 mmu-miR-365 beg:1368 end:1378 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& ||||||| &5' --------------GGGCATT- 3' Trim39 mghv-miR-M1-2 beg:392 end:412 pic:3' TTTCTCCCCCTCTC----CCCCAGAC 5'& ||||| | |||||||| &5' -------GGGAGCGCACAGGGGTCTG 3' Trim39 mmu-miR-1982.1 beg:16 end:29 pic:3' GACACCCTCTTGTATCCCACTCT 5'& |.|||||||. &5' -------------TGGGGTGAGG 3' Trim39 mmu-miR-124 beg:1418 end:1437 pic:3' CCGTAAGTGGC-GCACGGAAT 5'& |.||| .|||||||. &5' -----TTACCTTTGTGCCTTG 3' Trim39 mcmv-miR-m01-3star beg:1364 end:1387 pic:3' CGGCACT-TCGCTCG-CAAGGAGC 5'& |||| .|| ||||||| &5' ---GTGAGGGCATTCAGTTCCTC- 3' Trim39 mcmv-miR-m108-1 beg:1202 end:1219 pic:3' GCTGTGCTCGGTGGC--AGTCTTT 5'& || || |||||.| &5' ---------CC-CCTTTTCAGAGA 3' Trim39 mcmv-miR-m108-2-3p beg:957 end:976 pic:3' TGGCCAGTGAGCAGAG-CTCAGTG 5'& |||.| |||||| &5' -------ACTTGGAGAGGAGTCA- 3' Trim39 mcmv-miR-m22-1 beg:641 end:659 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& || |||.|||||| &5' -------GGAAAGGATGGGGAA 3' Trim39 mcmv-miR-M44-1 beg:134 end:157 pic:3' TGGCGC-CGAGACCTT-TTTCTAT 5'& ..|.| | |||. ||||||| &5' -TTGTGTGA---GGAGTAAAGATA 3' Trim39 mcmv-miR-M87-1 beg:697 end:718 pic:3' CGACGGCGACGGCTGCCGACGGA 5'& .| |||| .|||||.|| &5' ----TC-CTGCAGTTGGCTGTCT 3' Trim39 mghv-miR-M1-2 beg:549 end:568 pic:3' TTTCTCCCCCTCTCCCCCAGAC 5'& || |||| |||||||.| &5' ---GAA-GGGA-AGGGGGTTT- 3' Trim39 mghv-miR-M1-8 beg:168 end:191 pic:3' CTGGTTTGGGGGTC-ACTCACGA 5'& ||||||.| ||| ||||||. &5' GACCAAGCA--CAGATGAGTGT- 3' Trim39 mmu-let-7astar beg:961 end:984 pic:3' CCTTTCTGTCA-TCTAACATATC 5'& |||.||. ||| |||| ||| &5' GGAGAGG-AGTCAGATAT--TAG 3' Trim39 mmu-let-7bstar beg:1131 end:1151 pic:3' CCCTTCCGTCATCCAACATATC 5'& ||.|| || ||||.||| &5' --GAGGGTGGT---TTGTGTAG 3' Trim39 mmu-let-7c-2star beg:1130 end:1151 pic:3' CCTTTCTGTCATCTAACATATC 5'& .|||| .||.| ||||.||| &5' --GAAGAGGGTGGTTTGTGTAG 3' Trim39 mmu-let-7fstar beg:1131 end:1151 pic:3' CCCTTCCGTTATCTAACATATC 5'& ||.|| .| ||||.||| &5' --GAGGGTGGT---TTGTGTAG 3' Trim39 mmu-miR-101astar beg:1449 end:1466 pic:3' CGTAGTCGTGACACTATTGACT 5'& .||| |||||.||. &5' -----GGCAA---GATAATTGG 3' Trim39 mmu-miR-105 beg:112 end:136 pic:3' TGGTGTT-CGTAGACTCGTGAACC 5'& ||||| |||||||.| ||| &5' ACCACCTCGCATCTGGGA---TGG 3' Trim39 mmu-miR-1196 beg:809 end:832 pic:3' TCCGTCTCCGTCCATCTAAA 5'& |||||||| |||| ||||| &5' AGGCAGAGACAGGCGGATTT 3' Trim39 mmu-miR-125a-5p beg:501 end:522 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||| .|||| ||||||| &5' ---TAGGA-GAAGGA--TCAGGGA 3' Trim39 mmu-miR-125b-5p beg:504 end:522 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& .|| ||| ||||||| &5' ----GAGA-AGGA--TCAGGGA 3' Trim39 mmu-miR-130bstar beg:978 end:993 pic:3' TCATCACGTTGTC-CCTTTCTCA 5'& .|| |||.|||| &5' ----------TAGAGGAGAGAG- 3' Trim39 mmu-miR-130bstar beg:544 end:564 pic:3' TCATCACGTTG-TCCCTTTCTCA 5'& || ||||||.|.| &5' -----TGAATGAAGGGAAGGGG- 3' Trim39 mmu-miR-136 beg:1089 end:1106 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& .||. .||||||| &5' --------GAAGGTGATGGAGT 3' Trim39 mmu-miR-139-3p beg:699 end:721 pic:3' GAGGTTGTC--CCGGCGCAGAGGT 5'& ||| .||| |||. |||||.| &5' -TCCTGCAGTTGGCT--GTCTCTA 3' Trim39 mmu-miR-139-5p beg:184 end:206 pic:3' GACCTCTGTGCACG--------TGACATCT 5'& |||. ||||||| &5' ----------GTGTCCCTCCTTACTGTAG- 3' Trim39 mmu-miR-139-5p beg:1426 end:1444 pic:3' GACCTCTGTGCACG----TGACATCT 5'& |||| |||||.| &5' ----------GTGCCTTGACTGTGG- 3' Trim39 mmu-miR-141star beg:1088 end:1099 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& |||||.|| &5' --------------GGAAGGTG 3' Trim39 mmu-miR-144 beg:184 end:205 pic:3' TCATGTAGT-AGATATGACAT 5'& . || || ||||||| &5' ---GTGTCCCTCCTTACTGTA 3' Trim39 mmu-miR-149 beg:767 end:793 pic:3' CCCTCAC-TTCTGTGC-----CTCGGTCT 5'& || ||||||. |||||.|. &5' -----TGCAAGACATACATCTGAGCCGGG 3' Trim39 mmu-miR-149 beg:1142 end:1163 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& ||| || || |.|||||| &5' ----GTGTAG-CAAAGGGCCAGA 3' Trim39 mmu-miR-149 beg:960 end:978 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& ||.||| ||||.|||| &5' -----TGGAGA---GGAGTCAGA 3' Trim39 mmu-miR-151-3p beg:834 end:857 pic:3' GGAGTTCC--TCGGAGTCAGATC 5'& .|||||| ||||| .||||| &5' -TTCAAGGCCAGCCT-GGTCTA- 3' Trim39 mmu-miR-154 beg:365 end:383 pic:3' GCTTCCGTTGTGCC-TATTGGAT 5'& | ||.| | |||.||| &5' -----GTGACGCAGAATAGCCT- 3' Trim39 mmu-miR-155 beg:479 end:501 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& .|| .| |||||||| &5' GCCAGA---GCTTG-AGCATTAA 3' Trim39 mmu-miR-17star beg:184 end:207 pic:3' GATGTTCAC-GGGAG---TGACGTCA 5'& .|||| ||||| ||||.||| &5' ----GAGTGTCCCTCCTTACTGTAGT 3' Trim39 mmu-miR-182 beg:1280 end:1303 pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& ||| || |.| ||||||| &5' -GGTACCAGA--TGCA--TGCCAAA 3' Trim39 mmu-miR-185 beg:571 end:587 pic:3' AGTCCTTGACGGA-AAGAGAGGT 5'& |.|| ||.|||.| &5' ---------GTCTCTTTTCTTC- 3' Trim39 mmu-miR-186 beg:1429 end:1451 pic:3' TCGGGTTTTCCTCTTAAGAAAC 5'& |||. ..||||||| &5' -GCCTTGACTGT-GGTTCTTTG 3' Trim39 mmu-miR-186star beg:578 end:594 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& ||| .|||||||. &5' ---------TTCTTCTTAGGGT 3' Trim39 mmu-miR-188-3p beg:375 end:398 pic:3' ACGTTTGGGACGT---ACACCCTC 5'& |.||.||. |||||||| &5' ----AGCCTTGTTCCTTGTGGGAG 3' Trim39 mmu-miR-1896 beg:1198 end:1219 pic:3' GAGGAGTGGGTGGT--AGTCTCTC 5'& ||..| || ||||||| &5' -----CATTCCCCTTTTCAGAGA- 3' Trim39 mmu-miR-1896 beg:801 end:821 pic:3' GAGGAGTGGGTGGTA-GTCTCTC 5'& .||||. |||||| &5' -----TACCCGGGAGGCAGAGA- 3' Trim39 mmu-miR-1896 beg:873 end:894 pic:3' GAGGAGTGGG--TGGTA-GTCTCTC 5'& .|| .|.|| |||||| &5' ------GCCACAGCTATACAGAGA- 3' Trim39 mmu-miR-1897-5p beg:727 end:752 pic:3' GGGGGAGAAA-GAGGTAGGTTTC 5'& |.|||||| .||| ||.|||| &5' -CTCCTCTTGCTTCCTTCTAAAG 3' Trim39 mmu-miR-1898 beg:1004 end:1018 pic:3' CTAGGGGACACTTGGAACTGGA 5'& |.|||||.||| &5' -----------AGCCTTGGCCT 3' Trim39 mmu-miR-1906 beg:1308 end:1328 pic:3' TCGGGACGGAGTCCGACGACGT 5'& |||| |.| ||||||| &5' ---CCTGGATTAT-CTGCTGC- 3' Trim39 mmu-miR-1927 beg:393 end:410 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& |.|. |||.|||| &5' ---------AGCGCACAGGGGTC 3' Trim39 mmu-miR-1927 beg:605 end:629 pic:3' AGTCAGGGA---TTGTA-GGTCTCCAG 5'& ||| .|. ||||||||. &5' -----CCCATAGGATTAGCCAGAGGTT 3' Trim39 mmu-miR-1928 beg:1134 end:1152 pic:3' CTCGACCGT-TACATCGA 5'& .| |||. .|||||| &5' -GGGTGGTTTGTGTAGC- 3' Trim39 mmu-miR-1937a beg:126 end:148 pic:3' ACCC--CCGAGCAGGC-CCTAA 5'& ||| ||.|.|| .| ||| &5' -GGGATGGTTTGTGTGAGGA-- 3' Trim39 mmu-miR-1937c beg:117 end:134 pic:3' ACCCCCGAGA--AGGCCCTA 5'& ||| ||.||||| &5' ------CTCGCATCTGGGAT 3' Trim39 mmu-miR-193star beg:1056 end:1081 pic:3' AGTAGAACGGGC------GTTTCTGGGT 5'& ||||||| ||||||||.| &5' ----CTTGCCCCCTGGCTCAAAGACCTA 3' Trim39 mmu-miR-1941-3p beg:529 end:549 pic:3' TACCCTCTATGACGATTCTAC 5'& ||| ||..| |||.|||| &5' ---GGA-ATGTTTCTAGGATG 3' Trim39 mmu-miR-1944 beg:160 end:184 pic:3' TTAGTCTTGA---ACTGTAAGTCGTGTCTC 5'& |..|| |||| |||||||| &5' -----GGGCTGCATGACCA--AGCACAGA- 3' Trim39 mmu-miR-1948 beg:312 end:334 pic:3' GACATGCTCACGAG----ACGGATTT 5'& |.|| ||. |||.|||| &5' ------GGGT-CTTAACTTGCTTAAA 3' Trim39 mmu-miR-1948 beg:1309 end:1333 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| ||||||... &5' CTGGATTATCTG-CTGCCTGGG 3' Trim39 mmu-miR-1951 beg:1476 end:1497 pic:3' ATCGGTGTGGTCAGAGGTGATG 5'& |.| ||| || ||||||| &5' TGGA-ACAA-AGGATCCACTA- 3' Trim39 mmu-miR-1952 beg:200 end:218 pic:3' GTCTTCCTCCCACCTCT 5'& .|| .|||| ||||| &5' TAGTGGGAGAGTGGA-- 3' Trim39 mmu-miR-1952 beg:637 end:658 pic:3' GTCTTCCT--CCCACCTCT 5'& ||||||| || |||.|| &5' -AGAAGGAAAGGATGGGGA 3' Trim39 mmu-miR-1955 beg:120 end:134 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||| ||||||. &5' ------------GCAT-CTGGGAT- 3' Trim39 mmu-miR-1959 beg:1185 end:1208 pic:3' GAGGTGACTCGATGTAGGGG 5'& ||.||| ||||.||| &5' CTTCACCCTTTGACATTCCC 3' Trim39 mmu-miR-1960 beg:43 end:65 pic:3' TCGGGAGAAGATTG-TCGTGACC 5'& .|||.|| ||||| .|| ||| &5' GGCCTTC--CTAACTGGC-CTG- 3' Trim39 mmu-miR-1967 beg:1321 end:1342 pic:3' CGTAGAAGAGGGGTCC--TAGGAGT 5'& || || || |||.||| &5' -------CTGCCTGGGTAATCTTCA 3' Trim39 mmu-miR-1968 beg:155 end:170 pic:3' TCAGGTGGTAGGAATTG--TCGACGT 5'& .|| .|||||| &5' --------------GACTGGGCTGCA 3' Trim39 mmu-miR-1982.1 beg:748 end:758 pic:3' GACACCCTCTTGTATCCCACTCT 5'& ||||||| &5' ----------------GGTGAGA 3' Trim39 mmu-miR-1983 beg:1079 end:1100 pic:3' TCTTTTGTA-CGAGGTCCACTC 5'& .||||. | |||||| &5' GGAAAGAAGGGA---AGGTGA- 3' Trim39 mmu-miR-199a-5p beg:1454 end:1481 pic:3' CTTGTCCATCAG--ACTTGTG-ACCC 5'& .|.| |.||. |||| ||| &5' -GATAATTGGTTGGTGAAAATATGG- 3' Trim39 mmu-miR-200astar beg:739 end:760 pic:3' AGGTCGTGACAGGCCATTCTAC 5'& ||| || |||.||||| &5' TCCTT--CTAAA-GGTGAGATG 3' Trim39 mmu-miR-202-5p beg:140 end:160 pic:3' TTTCTTCATATACGTATCCTT 5'& .||.|||| | |||||| &5' -GAGGAGTAAA-G-ATAGGA- 3' Trim39 mmu-miR-204 beg:1078 end:1095 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& |||| .||||||| &5' ------AGGAAA--GAAGGGAA 3' Trim39 mmu-miR-204 beg:539 end:560 pic:3' TCCGTATCCTAC-TGTTTCCCTT 5'& ||||||| | ||||||| &5' -----TAGGATGAATGAAGGGAA 3' Trim39 mmu-miR-205 beg:536 end:557 pic:3' GTCTGAGG-CCACCTTACTTCCT 5'& .||. || |||||||||. &5' ----TTCTAGGATGAATGAAGGG 3' Trim39 mmu-miR-206 beg:925 end:947 pic:3' GGTGTGTGA--AGGAATGTAAGGT 5'& ||.|||. ||||| |||| &5' -CATACATCGGTCCTTCCATT--- 3' Trim39 mmu-miR-20astar beg:1 end:14 pic:3' GAAATTCACGAGCATTACGTCA 5'& | .||||||| &5' ------------GAGATGCAGT 3' Trim39 mmu-miR-20bstar beg:183 end:207 pic:3' GATCTTCAC---GAGT-GTGACGTCA 5'& .|||| ||| .||||.||| &5' ----GAGTGTCCCTCCTTACTGTAGT 3' Trim39 mmu-miR-211 beg:1077 end:1095 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||||| .||||||| &5' -----AAGGAAA--GAAGGGAA 3' Trim39 mmu-miR-211 beg:540 end:560 pic:3' TCCGTTTCCTAC-TGTTTCCCTT 5'& |||||| | ||||||| &5' ------AGGATGAATGAAGGGAA 3' Trim39 mmu-miR-2134 beg:939 end:959 pic:3' CGTGG-GGCAAAGGGTTCTG 5'& || ..||||||||||.| &5' ---CCATTGTTTCCCAAGGC 3' Trim39 mmu-miR-2134 beg:853 end:875 pic:3' CGTGGGGCAA--AGGGTTCTG 5'& .|| || |.|||.||| &5' -TACAAAGTGAGTTCCAGGAC 3' Trim39 mmu-miR-2136 beg:1101 end:1118 pic:3' GTGTAGAGTCAGTTGTGGGTC 5'& .|||. || |||||| &5' ---GTCTT--TCT-CACCCA- 3' Trim39 mmu-miR-2139 beg:987 end:1005 pic:3' CGTCAATGGTCCTCG--TCGCGTCGA 5'& ||| .|.|.|||| &5' -----------GAGAAAGGTGTAGCT 3' Trim39 mmu-miR-2145 beg:885 end:902 pic:3' TTGGTC-CGGGCTGGGACGA 5'& ||| | ||||||. &5' ---CAGAGAA--ACCCTGT- 3' Trim39 mmu-miR-2146 beg:883 end:905 pic:3' GTGTACC-TTGGGA-AGAGGTG 5'& .||| | |||||| |||| &5' TACAGAGAAACCCTGTCTC--- 3' Trim39 mmu-miR-214star beg:798 end:826 pic:3' CGTGT---CGTTCACA-TCTGTCCGT 5'& |||.| | .|| |||||||| &5' GCATACCCGGGAGGCAGAGACAGGC- 3' Trim39 mmu-miR-214star beg:257 end:274 pic:3' CGTGTCGTTCACATCTGTCCGT 5'& ||||.| .||||||. &5' GCACGG-------GGACAGGT- 3' Trim39 mmu-miR-215 beg:20 end:37 pic:3' CAGACAGTTTAGTATCCAGTA 5'& || |.. || |||||| &5' ----GTGAGG-CA-AGGTCA- 3' Trim39 mmu-miR-218 beg:160 end:183 pic:3' TGTACCAAT----CTAGTTCGTGTT 5'& ||| || ||||||||. &5' ---TGGGCTGCATGACCAAGCACAG 3' Trim39 mmu-miR-2183 beg:390 end:409 pic:3' TCCTC-CA-GTCCCCAAGTT 5'& .|||| | ||||||| &5' GGGAGCGCACAGGGGT---- 3' Trim39 mmu-miR-221 beg:986 end:1005 pic:3' CTTTGGGTCGTCTGT-TACATCGA 5'& || ||| .||||||| &5' -------AG-AGAAAGGTGTAGCT 3' Trim39 mmu-miR-222 beg:986 end:1005 pic:3' TGGGTCATCGGTCTACATCGA 5'& || || ||.||||||| &5' ----AG-AGAAAGGTGTAGCT 3' Trim39 mmu-miR-24 beg:818 end:839 pic:3' GACAAGGACGACTT--GACTCGGT 5'& | || || |||||.. &5' -----CAGGCGGATTTCTGAGTT- 3' Trim39 mmu-miR-24 beg:86 end:106 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||||| |. .||||||| &5' --GTTCCAGTC---TTGAGCCA 3' Trim39 mmu-miR-27a beg:1422 end:1444 pic:3' CGCCTTGAAT--CGG---TGACACTT 5'& ||| ||| ||||||. &5' ------CTTTGTGCCTTGACTGTGG- 3' Trim39 mmu-miR-27b beg:1422 end:1444 pic:3' CGTCTTGAAT--CGG---TGACACTT 5'& ||| ||| ||||||. &5' ------CTTTGTGCCTTGACTGTGG- 3' Trim39 mmu-miR-27bstar beg:1154 end:1177 pic:3' CAAGTGGTTA---GTCGATTCGAGA 5'& .|||. ||||||||||. &5' ----GCCAGAAGACAGCTAAGCTT- 3' Trim39 mmu-miR-29bstar beg:97 end:118 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |.|.|||.| |. ||||||| &5' TGAGCCATCTTGAGAAACCA-- 3' Trim39 mmu-miR-29bstar beg:838 end:849 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& |..||||| &5' --------------AGGCCAGC 3' Trim39 mmu-miR-30astar beg:1334 end:1355 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& || || ||| ||||||.| &5' -CTTCACACAA--GACTGAGA- 3' Trim39 mmu-miR-30estar beg:522 end:534 pic:3' CGACATTTGTAGGCTGACTTTC 5'& |.|||||.| &5' -------------GGCTGAAGG 3' Trim39 mmu-miR-30estar beg:1338 end:1355 pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||| ||||||.| &5' -------ACACAAGACTGAGA- 3' Trim39 mmu-miR-31 beg:722 end:742 pic:3' GTCGATACGGTCGT--AGAACGGA 5'& |. .|| ||||||.| &5' -------GTAGGCTCCTCTTGCTT 3' Trim39 mmu-miR-328 beg:1137 end:1162 pic:3' TGCCTT-CCCGTCTC-TCCCGGTC 5'& || | |.|| |||||||| &5' --GGTTTGTGTAGCAAAGGGCCAG 3' Trim39 mmu-miR-328 beg:805 end:826 pic:3' TGCCTTCCCGTCTCTC-CCGGTC 5'& |||.| |||||||| ||| &5' -CGGGA-GGCAGAGACAGGC--- 3' Trim39 mmu-miR-328 beg:468 end:487 pic:3' TGCCTTCCCGTCTC--TCCCGGTC 5'& |||| .||||||| &5' ------GGGCTTTTCCGGGGCCAG 3' Trim39 mmu-miR-342-3p beg:125 end:147 pic:3' TGCCCACGCTAA-AGACACACTCT 5'& || ||| |.||||||||. &5' -----TGGGATGGTTTGTGTGAGG 3' Trim39 mmu-miR-346 beg:807 end:830 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& .||||||| || |||.||. &5' GGAGGCAGAGACA--GGCGGAT- 3' Trim39 mmu-miR-3470a beg:841 end:865 pic:3' GGTCGGACCAGATGTTTCACT 5'& ||||||||||||||||||||| &5' CCAGCCTGGTCTACAAAGTGA 3' Trim39 mmu-miR-3470b beg:841 end:865 pic:3' GGTCGGACCAGATGTCTCACT 5'& ||||||||||||||| ||||| &5' CCAGCCTGGTCTACAAAGTGA 3' Trim39 mmu-miR-3473 beg:95 end:110 pic:3' CCGACTCGGTAGAGAGGT 5'& .||||||||||. &5' --TTGAGCCATCTT---- 3' Trim39 mmu-miR-3474 beg:210 end:227 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& || ||||||||| &5' --------GTGGACTCCCAGGG 3' Trim39 mmu-miR-351 beg:501 end:522 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& .||| .|||| ||||||| &5' TAGGA--GAAGGA----TCAGGGA 3' Trim39 mmu-miR-361 beg:214 end:242 pic:3' CATG-GGGACCTCTA-----AGACTATT 5'& || ||| ||.||| ||||.|. &5' --ACTCCCAGGGGATTGTACTCTGGTG- 3' Trim39 mmu-miR-375 beg:1466 end:1487 pic:3' AGTGCGCTCGGCTTGCTTGTTT 5'& |.|| ||||||| &5' ----GTGAAAATATGGAACAAA 3' Trim39 mmu-miR-409-3p beg:1186 end:1206 pic:3' TCCCCAAGTGGCTCGTTGTAAG 5'& |||||| ..|||||| &5' -----TTCACCCTTTGACATTC 3' Trim39 mmu-miR-412 beg:1079 end:1100 pic:3' GCCGATCA-CCTGGTCCACTT 5'& || || ||. |||||| &5' -GGAAAGAAGGGA-AGGTGA- 3' Trim39 mmu-miR-449c beg:1310 end:1330 pic:3' GGTCGATCGT-TACGTGACGGA 5'& ||.| || ..|||||| &5' ----CTGGATTATCTGCTGCCT 3' Trim39 mmu-miR-450b-3p beg:1031 end:1048 pic:3' TACGTACGTTTTACAAGGGTTA 5'& | . ||||||| &5' ------GTGGTTA-TTCCCAA- 3' Trim39 mmu-miR-450b-5p beg:756 end:777 pic:3' ATAAGTCC-TTGTAT-GACGTTTT 5'& || |.|| ||||||.| &5' ------GGAAGCAATCCTGCAAGA 3' Trim39 mmu-miR-453 beg:1320 end:1339 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& ||| || .||.||.|| &5' -----GCTGCCT---GGGTAATCT 3' Trim39 mmu-miR-455 beg:154 end:169 pic:3' CACATATACGGGCACCTGACG 5'& | | |||.|||| &5' --------GGAC-TGGGCTGC 3' Trim39 mmu-miR-469 beg:508 end:528 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& |.|||||. |.||||||| &5' -------AGGATCAG-GGAAGAGGC- 3' Trim39 mmu-miR-470 beg:854 end:874 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& || |||| ||||.|| &5' ---CAA-AGTGAGT-TCCAGGA- 3' Trim39 mmu-miR-486 beg:324 end:342 pic:3' GAGCCCCGTCGAGTC--ATGTCCT 5'& |||.| |.||||| &5' ---------GCTTAAAATGCAGGA 3' Trim39 mmu-miR-488 beg:365 end:384 pic:3' CTG-GTTCTTTGTCGGAAAGTT 5'& ||| || .||.|||||| &5' GACGCA--GAATAGCCTT---- 3' Trim39 mmu-miR-501-5p beg:301 end:319 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& || .||| |||||.| &5' --TCTA-TAGG---AAAGGGT- 3' Trim39 mmu-miR-532-3p beg:192 end:212 pic:3' ACGTTCGGAACC-CA-CACCCTCC 5'& |||| || ||||||| &5' ------CCTTACTGTAGTGGGAG- 3' Trim39 mmu-miR-532-3p beg:377 end:398 pic:3' ACGTTCGGAACCC---ACACCCTCC 5'& ||||||| |||||||| &5' ----AGCCTTGTTCCTTGTGGGAG- 3' Trim39 mmu-miR-542-3p beg:1259 end:1280 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& .|| |.||||||| &5' ----GGTACATATTTTGTCACA 3' Trim39 mmu-miR-542-3p beg:437 end:453 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |||||. ||||||. &5' ---CAGTTG-----CTGTCAT- 3' Trim39 mmu-miR-543 beg:519 end:541 pic:3' TTCTTCACGTGGCG--CTTACAAA 5'& |||| | .|.| |||||||| &5' --GAAGAG-GCTGAAGGAATGTTT 3' Trim39 mmu-miR-544 beg:321 end:342 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||||| |||||||||.| &5' ---CTTGCTTAAAATGCAGGA- 3' Trim39 mmu-miR-547 beg:1062 end:1083 pic:3' GAGTGAGTTTCTACATGGTTC 5'& || .|||||||| |.||| &5' CTGGCTCAAAGAC---CTAAG 3' Trim39 mmu-miR-582-3p beg:1392 end:1403 pic:3' AACCCAAGTCAACAAGTTGTCC 5'& |||||||| &5' --------------TCAACAGG 3' Trim39 mmu-miR-615-3p beg:206 end:229 pic:3' TTCTC-CCTCTGGGTCCGAGCCT 5'& .|||| ||| |||||| ||| &5' GAGAGTGGACTCCCAGG---GGA 3' Trim39 mmu-miR-654-3p beg:961 end:981 pic:3' TTCCACTACCAGTC-GTCTGTAT 5'& || || || || ||||.|| &5' --GGAGA-GG--AGTCAGATAT- 3' Trim39 mmu-miR-666-3p beg:1350 end:1369 pic:3' TCGTCCGCTAGTGC---GACGTCGG 5'& || || ||||||. &5' -------GA-CAAGAAACTGCAGT- 3' Trim39 mmu-miR-669e beg:760 end:779 pic:3' TACTTGTACGTGT--GTGTTCTGT 5'& ||| ..||||||| &5' --------GCAATCCTGCAAGACA 3' Trim39 mmu-miR-669e beg:1326 end:1350 pic:3' TACTTGTACGT-GTGTGTTCTGT 5'& || .| |||||||||| &5' -TGGGTAATCTTCACACAAGAC- 3' Trim39 mmu-miR-670 beg:512 end:522 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& ||||||| &5' --------------TCAGGGA- 3' Trim39 mmu-miR-673-3p beg:993 end:1015 pic:3' CCACGTGTCTTGAG-TCGGGGCCT 5'& ||||.| .|| ||||..|| &5' GGTGTA----GCTAAAGCCTTGG- 3' Trim39 mmu-miR-678 beg:1345 end:1356 pic:3' GGAGGTCAGGAACGTGGCTCTG 5'& ||.||||| &5' --------------ACTGAGAC 3' Trim39 mmu-miR-686 beg:801 end:818 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& .||| ||||.|||. &5' ----TACCC---GGGAGGCAG- 3' Trim39 mmu-miR-687 beg:533 end:549 pic:3' AGTAACGACGTAAGGTCCTATC 5'& ||. |||.|||||. &5' -------TGT-TTCTAGGATG- 3' Trim39 mmu-miR-690 beg:993 end:1019 pic:3' AAACCAACAC----TCGG-ATCGGAAA 5'& ||| |||| |.||||| &5' ---GGTGTAGCTAAAGCCTTGGCCTT- 3' Trim39 mmu-miR-690 beg:362 end:384 pic:3' AAACCAACACT-CGG---ATCGGAAA 5'& ||||| || ||||||| &5' ------TGTGACGCAGAATAGCCTT- 3' Trim39 mmu-miR-691 beg:322 end:343 pic:3' AAAAGACGGAGAGAA-GTCCTTA 5'& .|||.| |||||| &5' ----TTGCTTAAAATGCAGGAA- 3' Trim39 mmu-miR-692 beg:980 end:994 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||| |.||||| &5' ----GAGG-----AGAGAGA- 3' Trim39 mmu-miR-698 beg:1086 end:1106 pic:3' TCCCTTCCTTTGCTCTTAC 5'& |||||||| .|.| ||.| &5' AGGGAAGGTGATG-GAGT- 3' Trim39 mmu-miR-702 beg:29 end:49 pic:3' CTCGCCCCA--TTTC-CCACCCGT 5'& ||| |.|| ||||||| &5' ------GGTCAAGAGCGGTGGGC- 3' Trim39 mmu-miR-708 beg:1163 end:1179 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |||||| ||||.|| &5' --CAGCTA-------AGCTTCT- 3' Trim39 mmu-miR-708 beg:722 end:735 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |||.|||||| &5' ------------GTAGGCTCCT- 3' Trim39 mmu-miR-709 beg:728 end:748 pic:3' AGGAGGACGGAGACGGAGG 5'& |||||.|||.|| |.||. &5' TCCTCTTGCTTC--CTTCT 3' Trim39 mmu-miR-712 beg:628 end:647 pic:3' CCATGGC-GGGCCCA-CTTCCTC 5'& | ...||| |||||| &5' ------GATTTGGGGAGAAGGA- 3' Trim39 mmu-miR-743b-5p beg:772 end:790 pic:3' ACTACCTGTGGTCAGACTTGT 5'& ||||. |||||.| &5' -----GACATACATCTGAGC- 3' Trim39 mmu-miR-758 beg:1259 end:1282 pic:3' ATCACC-TGGTC----CAGTGTTT 5'& || || || |||||||| &5' -AG-GGTACATATTTTGTCACAAA 3' Trim39 mmu-miR-764-5p beg:1363 end:1385 pic:3' TC-CTCCTGTACACTCGTGG 5'& || ||||.||| ||. || &5' AGTGAGGGCATTC-AGTTCC 3' Trim39 mmu-miR-764-5p beg:476 end:499 pic:3' TCCTCCTGTAC---ACTCGTGG 5'& |.|| || ||||||.. &5' --GGGGCCAGAGCTTGAGCATT 3' Trim39 mmu-miR-767 beg:833 end:854 pic:3' ACGAG-TCT-GTTGGTACCACGT 5'& |.|| ||. ||.|| |||| &5' -GTTCAAGGCCAGCC-TGGT--- 3' Trim39 mmu-miR-871 beg:816 end:838 pic:3' GTACTGACCGTGATTAGACTTAT 5'& ||| |||. |||||.| &5' ---GACAGGCGGATTTCTGAGT- 3' Trim39 mmu-miR-872star beg:74 end:93 pic:3' TCCTCCGATGACGTTATCAAGT 5'& ||. || | .|.|||| &5' ----GGTGTCT-CCGTGGTTC- 3' Trim39 mmu-miR-878-3p beg:437 end:454 pic:3' AGATGGGTCACACCACAGTACG 5'& |||| || ||||||| &5' ------CAGT-TGCTGTCATG- 3' Trim39 mmu-miR-879 beg:993 end:1013 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||. ||||| ||||||. &5' GGTGT--AGCTA-AAGCCTT- 3' Trim39 mmu-miR-881 beg:0 end:15 pic:3' AGATAAGTCTTTTCTGTGTCAA 5'& ||.|||..||||| &5' ---------AAGAGATGCAGTT 3' Trim39 mmu-miR-881star beg:1093 end:1112 pic:3' TCTACACTGACAATAGAGAGAC 5'& |||| || .|||.||| &5' ----GTGA-TGGAGTCTTTCT- 3' Trim39 mmu-miR-881star beg:427 end:451 pic:3' TCTA--CACTGACAATAGAGAGAC 5'& |||| |||.| |||. || || &5' AGATGAGTGGCAGTTG-CTGTC-- 3' Trim39 mmu-miR-883a-3p beg:692 end:711 pic:3' TATGACTCTCGACA----ACGTCAAT 5'& |||| |||||||. &5' ----------CTGTTTCCTGCAGTTG 3' Trim39 mmu-miR-883a-3p beg:1 end:15 pic:3' TATGACTCTCGACAACGTCAAT 5'& |||| ||||||| &5' -----GAGA-----TGCAGTT- 3' Trim39 mmu-miR-883b-3p beg:692 end:711 pic:3' TATGACTCTCTACAACGTCAAT 5'& ||| |||||||. &5' ---CTGTTTCC---TGCAGTTG 3' Trim39 mmu-miR-883b-3p beg:0 end:15 pic:3' TATGACTCTCTACAACGTCAAT 5'& ||||| ||||||| &5' ------AGAGA---TGCAGTT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim39 RAID00024235 mmu-miR-6942-5p miRNA MIMAT0027784 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00047600 mmu-miR-98-5p miRNA MIMAT0000545 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00071778 mmu-miR-6352 miRNA MIMAT0025095 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00078886 mmu-miR-497b miRNA MIMAT0031404 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00097867 mmu-miR-191-5p miRNA MIMAT0000221 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00179304 mmu-miR-3970 miRNA MIMAT0019355 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00271606 mmu-miR-7046-3p miRNA MIMAT0027997 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00291660 mmu-miR-320-5p miRNA MIMAT0017057 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00299726 mmu-miR-7b-5p miRNA MIMAT0000678 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00302719 mmu-miR-208b-3p miRNA MIMAT0004939 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00331027 mmu-miR-205-5p miRNA MIMAT0000238 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00340334 mmu-miR-22-3p miRNA MIMAT0000531 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00357629 mmu-miR-758-3p miRNA MIMAT0003889 Trim39 mRNA 79263 Prediction 0.2202 Trim39 RAID00448201 mmu-miR-130a-3p miRNA MIMAT0000141 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00598766 mmu-miR-6975-3p miRNA MIMAT0027853 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00732967 mmu-miR-721 miRNA MIMAT0003515 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00733995 mmu-miR-363-5p miRNA MIMAT0017076 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00751458 mmu-miR-148a-3p miRNA MIMAT0000516 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00769032 mmu-miR-23b-3p miRNA MIMAT0000125 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00782557 mmu-let-7c-5p miRNA MIMAT0000523 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00789983 mmu-miR-139-5p miRNA MIMAT0000656 Trim39 mRNA 79263 Prediction 0.2202 Trim39 RAID00861845 mmu-miR-153-5p miRNA MIMAT0016992 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00868488 mmu-miR-6959-5p miRNA MIMAT0027818 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00893814 mmu-miR-147-5p miRNA MIMAT0017269 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID00907602 mmu-miR-1896 miRNA MIMAT0007873 Trim39 mRNA 79263 CLIP-seq//Prediction 0.6308 Trim39 RAID00983855 mmu-let-7a-5p miRNA MIMAT0000521 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01075300 mmu-miR-140-3p miRNA MIMAT0000152 Trim39 mRNA 79263 Prediction 0.2202 Trim39 RAID01106055 mmu-let-7i-5p miRNA MIMAT0000122 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01256248 mmu-miR-543-5p miRNA MIMAT0017207 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01265720 mmu-miR-155-5p miRNA MIMAT0000165 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01282639 mmu-miR-184-3p miRNA MIMAT0000213 Trim39 mRNA 79263 CLIP-seq 0.5483 Trim39 RAID01345499 mmu-miR-206-3p miRNA MIMAT0000239 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01347910 mmu-miR-6395 miRNA MIMAT0025146 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01418498 mmu-miR-124-3p miRNA MIMAT0000134 Trim39 mRNA 79263 CLIP-seq//Prediction 0.6592 Trim39 RAID01437177 mmu-miR-3470a miRNA MIMAT0015640 Trim39 mRNA 79263 CLIP-seq 0.5483 Trim39 RAID01512497 mmu-miR-3961 miRNA MIMAT0019338 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01520445 mmu-miR-375-3p miRNA MIMAT0000739 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01625286 mmu-miR-7056-3p miRNA MIMAT0028017 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01690358 mmu-miR-207 miRNA MIMAT0000240 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01738015 mmu-miR-202-3p miRNA MIMAT0000235 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01868078 mmu-let-7f-5p miRNA MIMAT0000525 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID01936105 mmu-let-7g-5p miRNA MIMAT0000121 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02016342 mmu-miR-186-5p miRNA MIMAT0000215 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02101104 mmu-miR-365-3p miRNA MIMAT0000711 Trim39 mRNA 79263 Prediction 0.2202 Trim39 RAID02107698 mmu-miR-122-5p miRNA MIMAT0000246 Trim39 mRNA 79263 CLIP-seq//Prediction 0.6308 Trim39 RAID02108328 mmu-miR-411-5p miRNA MIMAT0004747 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02139321 mmu-miR-148b-3p miRNA MIMAT0000580 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02187379 mmu-miR-494-3p miRNA MIMAT0003182 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02202505 mmu-miR-7672-5p miRNA MIMAT0029850 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02237438 mmu-miR-1906 miRNA MIMAT0007872 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02242814 mmu-miR-3093-3p miRNA MIMAT0014908 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02256161 mmu-miR-146b-5p miRNA MIMAT0003475 Trim39 mRNA 79263 CLIP-seq//Prediction 0.6308 Trim39 RAID02331286 mmu-miR-431-5p miRNA MIMAT0001418 Trim39 mRNA 79263 Prediction 0.2381 Trim39 RAID02344851 mmu-miR-342-3p miRNA MIMAT0000590 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02345262 mmu-miR-301b-3p miRNA MIMAT0004186 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02383460 mmu-miR-145a-5p miRNA MIMAT0000157 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02406490 mmu-miR-6897-5p miRNA MIMAT0027694 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02409344 mmu-miR-182-5p miRNA MIMAT0000211 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02427237 mmu-miR-301a-3p miRNA MIMAT0000379 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02429533 mmu-miR-7a-5p miRNA MIMAT0000677 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02479961 mmu-miR-1961 miRNA MIMAT0009434 Trim39 mRNA 79263 CLIP-seq 0.5483 Trim39 RAID02504436 mmu-miR-377-3p miRNA MIMAT0000741 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02537536 mmu-miR-130b-3p miRNA MIMAT0000387 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02623264 mmu-miR-5125 miRNA MIMAT0020635 Trim39 mRNA 79263 CLIP-seq 0.5483 Trim39 RAID02626748 mmu-miR-146a-5p miRNA MIMAT0000158 Trim39 mRNA 79263 CLIP-seq//Prediction 0.6308 Trim39 RAID02697189 mmu-miR-152-3p miRNA MIMAT0000162 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02720434 mmu-miR-504-5p miRNA MIMAT0004889 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02800389 mmu-miR-208a-3p miRNA MIMAT0000520 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02922256 mmu-let-7b-5p miRNA MIMAT0000522 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02936673 mmu-miR-10a-5p miRNA MIMAT0000648 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID02941144 mmu-miR-3110-5p miRNA MIMAT0014951 Trim39 mRNA 79263 CLIP-seq 0.5483 Trim39 RAID03038076 mmu-miR-6384 miRNA MIMAT0025130 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03074030 mmu-miR-96-5p miRNA MIMAT0000541 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03179433 mmu-let-7d-5p miRNA MIMAT0000383 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03229391 mmu-miR-6994-5p miRNA MIMAT0027890 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03294523 mmu-miR-331-3p miRNA MIMAT0000571 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03307936 mmu-miR-7227-3p miRNA MIMAT0028423 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03310856 mmu-miR-129-5p miRNA MIMAT0000209 Trim39 mRNA 79263 CLIP-seq//Prediction 0.6308 Trim39 RAID03356905 mmu-miR-3074-5p miRNA MIMAT0014856 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03360820 mmu-miR-328-5p miRNA MIMAT0017030 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03388786 mmu-miR-532-3p miRNA MIMAT0004781 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03456064 mmu-miR-128-3p miRNA MIMAT0000140 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03465325 mmu-miR-450b-3p miRNA MIMAT0003512 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03515986 mmu-miR-3087-3p miRNA MIMAT0014896 Trim39 mRNA 79263 CLIP-seq 0.5483 Trim39 RAID03530440 mmu-miR-217-5p miRNA MIMAT0000679 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03579949 mmu-miR-3100-3p miRNA MIMAT0014920 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03620489 mmu-miR-450a-1-3p miRNA MIMAT0017182 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03643086 mmu-miR-483-3p miRNA MIMAT0003120 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03650470 mmu-miR-543-3p miRNA MIMAT0003168 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03744084 mmu-miR-875-3p miRNA MIMAT0004938 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03747214 mmu-miR-328-3p miRNA MIMAT0000565 Trim39 mRNA 79263 Prediction 0.2202 Trim39 RAID03821816 mmu-miR-6901-5p miRNA MIMAT0027702 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03841540 mmu-miR-23a-3p miRNA MIMAT0000532 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID03856071 mmu-miR-10b-5p miRNA MIMAT0000208 Trim39 mRNA 79263 Prediction 0.2202 Trim39 RAID03958349 mmu-miR-1a-3p miRNA MIMAT0000123 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID04006038 mmu-let-7e-5p miRNA MIMAT0000524 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID04027535 mmu-miR-875-5p miRNA MIMAT0004937 Trim39 mRNA 79263 Prediction 0.1828 Trim39 RAID04062342 mmu-miR-6916-5p miRNA MIMAT0027732 Trim39 mRNA 79263 Prediction 0.1828